Gene

KWMTBOMO02509

Pre Gene Modal

BGIBMGA002702

Annotation

PREDICTED:_ken_and_barbie_protein_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr5(-):3780485-3786525      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.485

CDS

ATGATGGGCGAGGGCCTGCTGACCTTGACGTACGGCAAGCACCACGCCTGCATCCTGAACGAGGTGGGCGCGGCGTGGCGCGGCGCCAGGTACTCCGACCTGGTGCTGGTCTGCGACGACGCCGTGCCCCTCGCGGCGCACAGAATCGTCATGGCCGCTGCTAGTCCTCTCATCAGGAAAATCCTCGACGATACACCATCAGTCGAGAATCCGGTCACGATTCACATGTCGGGCATCAACAGCACTCTCATGAGGCACCTACTTGTTTTTCTCTACAGCGGCCAAGCTTACATCGAGTCCGGCGAAATAGATGATATGCAAGAGCTGTTCGAATTATTAGAAATTAAATCGGACGTGTGGAAATCAACGAAAGAACGTCAGCAAGCCGAAGAAAGGAATAGGTCGTGTGAAAGAAAAGCAAAAAACCTCAAAACAGATATAAACAGCAATGAAAGCAGTAAACACGATGCGCCGTCTGGATCGTCACATTCAGAAAGTGAACGGGTCACACCGAGCGCAGGTTACAGTAAAGACAAAGACAAAGGAGACGCAGAATCGCTAAGTATAAAAAAAGAAAGTATGTCAACTAGCAGTAATGATGAAAGGGAAGATGAAGACGGAGAAAACAAAGAATGTGGCAGATTGACGGCACGGCGGCGGAGTTCCTCTAATCCTGTCAATCTATCTCTCGCACGAAATTCAGTAAACACAGGCAGTGAACATGACGACTCACAAGACGTAGATGTAGAAACAGTAGCAGCAAAGAATATATCTCGCCGGAGATCAACTTCATCAAGTCAAGACGATCAACCACAAGAAACGGTTTACAGGCGGCAGTTGCTCAATGACCGGATAGGTCGGGGGATTGAGAGAGCAAAAAGAAAATCACATTATTTGGAACCACCCGAATTGGATTTACGTACTGTTAAATTAGAAGATTACGCACACCTTAAACCGCCCGATCAAGATCTTATGTCATTGGTACAGACGTCTCCGGAAAATTATGTAGTCACACCACATCGGAAAAGAAGACCCGGCTTCCATAATTCACCTTCGCAAAATCCCCCGTTTGTTTCATTTCCACCAAGCTACTTAGAAGAAATGGCTCACCTACGGTATACTCAAGTACCGGCTACGGCTGCGGCTGTAGCGGCTAGTCGTCTAGGAGCATTACATTCACTAAGCGCATCAGCCCCTCCATATTTACCAGATCGAAGCCTAACACCCCCAACAGCCACACATGAAGAAGCGTTAAAATATAGACCGCCCAGCGCCGGATCGTGGGGACCATGGCTCTGTCAACCACAAATGGGAGGCGATGAAGCACCAGCGACGGAGCACGACCAAGGATCAAGTAAACAGGCACCAGTAAGAGAATATCGTTGTGAATATTGCGGGAAACAATTCGGCATGTCTTGGAATCTCAAAACCCATCTACGTGTACACACCGGAGAGAAACCGTTCGCTTGTCGTCTCTGCGTTGCTATGTTCAAACAAAAGGCACATTTACTGAAACATTTGTGTTCGGTACATCGTAACGTGATATCGTCAAGTGAAAACGACGGGAGAACTAACACGCCCGGACGGTTTAACTGTTGCTTCTGTCAACTTACCTTTGAAGCATTACCGGAGCTCATCAGACATTTGTCGGGACCACATAATAGTTTGCTTCTCAGCAAAAATTTGCACGAATGA

Protein

MMGEGLLTLTYGKHHACILNEVGAAWRGARYSDLVLVCDDAVPLAAHRIVMAAASPLIRKILDDTPSVENPVTIHMSGINSTLMRHLLVFLYSGQAYIESGEIDDMQELFELLEIKSDVWKSTKERQQAEERNRSCERKAKNLKTDINSNESSKHDAPSGSSHSESERVTPSAGYSKDKDKGDAESLSIKKESMSTSSNDEREDEDGENKECGRLTARRRSSSNPVNLSLARNSVNTGSEHDDSQDVDVETVAAKNISRRRSTSSSQDDQPQETVYRRQLLNDRIGRGIERAKRKSHYLEPPELDLRTVKLEDYAHLKPPDQDLMSLVQTSPENYVVTPHRKRRPGFHNSPSQNPPFVSFPPSYLEEMAHLRYTQVPATAAAVAASRLGALHSLSASAPPYLPDRSLTPPTATHEEALKYRPPSAGSWGPWLCQPQMGGDEAPATEHDQGSSKQAPVREYRCEYCGKQFGMSWNLKTHLRVHTGEKPFACRLCVAMFKQKAHLLKHLCSVHRNVISSSENDGRTNTPGRFNCCFCQLTFEALPELIRHLSGPHNSLLLSKNLHE

Uniprot

H9IZL7   F6ME18   A0A2A4JV34   A0A194PL12   A0A194R0N8   A0A212FG95   + More
A0A0L7LH87   D7EIK2   N6TL45   A0A1Y1KRQ0   A0A0T6AUX3   N6U167   A0A1W4WRD8   A0A1B6CPX5   A0A067R5M6   A0A2J7Q100   A0A1B6GF48   A0A1B6LUC6   A0A0L7QP34   A0A0N0BF70   A0A088AHA5   A0A195CB08   F4WGY9   A0A151K0K1   E2BV01   A0A158NVL6   A0A023EYU8   A0A0C9QL96   A0A336LSP0   E9INZ7   A0A1B6JDK3   A0A1L8DIH3   E2ABM9   A0A3L8D2R4   A0A0A9XHE1   A0A146LLZ5   A0A0J7KX01   A0A154P047   A0A3B0JD63   B4LNX8   E0VT69   Q17I27   A0A0L0CNH1   A0A034W3J5   A0A0K8UP35   A0A0K8VTT3   A0A034W0Y5   A0A1A9WAE1   A0A1A9UYE7   A0A1A9YJN1   A0A1A9ZRD0   A0A182LI65   A0A0C9RBJ6   A0A0C9RSP8   A0A0K8SBC4   A0A195BUV0   T1HJM4   A0A1B0ARM3   A0A195E3G8  

Pubmed

19121390    26354079    22118469    26227816    18362917    19820115    + More
23537049    28004739    24845553    21719571    20798317    21347285    25474469    21282665    30249741    25401762    26823975    17994087    20566863    17510324    26108605    25348373    20966253   

EMBL

BABH01014463    JF795585    AEG19520.1    NWSH01000617    PCG75270.1    KQ459606    + More
KPI91795.1    KQ461103    KPJ09406.1    AGBW02008706    OWR52733.1    JTDY01001081    KOB74933.1    KQ971307    EFA12027.1    APGK01020372    KB740193    KB631602    ENN81159.1    ERL84556.1    GEZM01075750    JAV63984.1    LJIG01022756    KRT78889.1    APGK01047308    KB741077    ENN74361.1    GEDC01021756    JAS15542.1    KK852945    KDR13444.1    NEVH01019960    PNF22246.1    GECZ01008836    JAS60933.1    GEBQ01012690    JAT27287.1    KQ414836    KOC60380.1    KQ435815    KOX72648.1    KQ978072    KYM97293.1    GL888148    EGI66468.1    KQ981248    KYN44240.1    GL450776    EFN80481.1    ADTU01027243    ADTU01027244    GBBI01004344    JAC14368.1    GBYB01001367    JAG71134.1    UFQT01000092    SSX19599.1    GL764397    EFZ17724.1    GECU01010396    JAS97310.1    GFDF01007805    JAV06279.1    GL438334    EFN69131.1    QOIP01000014    RLU14795.1    GBHO01023497    GBRD01005451    JAG20107.1    JAG60370.1    GDHC01009575    JAQ09054.1    LBMM01002434    KMQ94841.1    KQ434786    KZC05231.1    OUUW01000001    SPP73160.1    CH940648    EDW61147.1    DS235760    EEB16575.1    CH477243    EAT46332.1    JRES01000153    KNC33772.1    GAKP01010609    JAC48343.1    GDHF01024194    GDHF01006514    JAI28120.1    JAI45800.1    GDHF01010051    JAI42263.1    GAKP01010608    JAC48344.1    GBYB01010507    JAG80274.1    GBYB01010506    JAG80273.1    GBRD01015781    JAG50045.1    KQ976409    KYM90971.1    ACPB03007777    JXJN01002483    KQ979701    KYN19621.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    + More
UP000007266    UP000019118    UP000030742    UP000192223    UP000027135    UP000235965    UP000053825    UP000053105    UP000005203    UP000078542    UP000007755    UP000078541    UP000008237    UP000005205    UP000000311    UP000279307    UP000036403    UP000076502    UP000268350    UP000008792    UP000009046    UP000008820    UP000037069    UP000091820    UP000078200    UP000092443    UP000092445    UP000075882    UP000078540    UP000015103    UP000092460    UP000078492   

PRIDE

H9IZL7    F6ME18   

Pfam

PF00096   zf-C2H2        + More
PF00651   BTB

Interpro

IPR013087   Znf_C2H2_type        + More
IPR000210   BTB/POZ_dom       
IPR011333   SKP1/BTB/POZ_sf       
IPR036236   Znf_C2H2_sf       

SUPFAM

SSF54695   SSF54695        + More
SSF57667   SSF57667       

ProteinModelPortal

H9IZL7   F6ME18   A0A2A4JV34   A0A194PL12   A0A194R0N8   A0A212FG95   + More
A0A0L7LH87   D7EIK2   N6TL45   A0A1Y1KRQ0   A0A0T6AUX3   N6U167   A0A1W4WRD8   A0A1B6CPX5   A0A067R5M6   A0A2J7Q100   A0A1B6GF48   A0A1B6LUC6   A0A0L7QP34   A0A0N0BF70   A0A088AHA5   A0A195CB08   F4WGY9   A0A151K0K1   E2BV01   A0A158NVL6   A0A023EYU8   A0A0C9QL96   A0A336LSP0   E9INZ7   A0A1B6JDK3   A0A1L8DIH3   E2ABM9   A0A3L8D2R4   A0A0A9XHE1   A0A146LLZ5   A0A0J7KX01   A0A154P047   A0A3B0JD63   B4LNX8   E0VT69   Q17I27   A0A0L0CNH1   A0A034W3J5   A0A0K8UP35   A0A0K8VTT3   A0A034W0Y5   A0A1A9WAE1   A0A1A9UYE7   A0A1A9YJN1   A0A1A9ZRD0   A0A182LI65   A0A0C9RBJ6   A0A0C9RSP8   A0A0K8SBC4   A0A195BUV0   T1HJM4   A0A1B0ARM3   A0A195E3G8  

PDB

2M9A     E-value=5.23389e-08,     Score=139

KEGG

100862771    no KO assigned | (RefSeq) ken and barbie protein

GO

GO:0003676   GO:0000979   GO:0010468   GO:0030540   GO:0003700   GO:0030539   GO:0045497   GO:0045496   GO:0046426   GO:0003677   GO:0005634   GO:0005515   GO:0046872   GO:0003824   GO:0003997   GO:0005777   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

Length:

564

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00354000000000001

Exp number, first 60 AAs:

0.0014

Total prob of N-in:

0.00029

outside

1  -  564

 

 

Pi

167.857935

Theta

188.107325

Tajima's D

-1.011681

CLR

1018.745256

CSRT

0.137343132843358

Interpretation

Uncertain