Gene

KWMTBOMO02508  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002703

Annotation

32_kDa_apolipoprotein_precursor_[Bombyx_mori]

Location

Bomo_Chr5(-):3765147-3766125      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.884

CDS

ATGGCGAATTTCAACATGAACCGGTTTTTGGGTACTTGGTATGAAGCCGAGCGGTTCTTCACCGTCAGCGAACTTGGCTCTAGATGCGTCACCACCAACTATGTGAGCACTCCTGAGGGAAGAATCATTGTATCCAATGAAATCGTCAATTCTTTAACGGGAATGAAACGCCTTATGGAAGGTAGCCTTCAGATGATAGGGCGCGAAGGCGAGGGACGCTTCATGATTAAGTACTCATCATTGCCACTTCCGTATGAGTCCGAGTTCTCAATCCTGGACACGGACTACGACAACTATGCGGTGATGTGGTCATGCAGCGGCATAGGGCCGGTTCACACTCGTAAGTTATCGATGAAAGTATTCATATAA

Protein

MANFNMNRFLGTWYEAERFFTVSELGSRCVTTNYVSTPEGRIIVSNEIVNSLTGMKRLMEGSLQMIGREGEGRFMIKYSSLPLPYESEFSILDTDYDNYAVMWSCSGIGPVHTRKLSMKVFI

Similarity

Belongs to the calycin superfamily. Lipocalin family.

Uniprot

H9IZL8   B9VTR5   A0A194QVB0   Q8T5Q9   A0A2A4JUV9   A0A2H1WZF6   + More
A0A194PGG0   A0A212FG74   A0A2A4JUH0   A0A1D1ZII0   D6W7I9   A0A1W4WNZ9   E0VT70   J3JV57   A0A1B6CC82   A0A0K8TIR9   A0A0L7QPH9   A0A161MKB5   A0A2R7VY94   R4G7P7   A3EXQ4   A0A0T6BF28   A0A1Y1KWD0   A0A0J7NQV0   A0A154P066   A0A069DSJ7   F4WGZ0   A0A151X5N1   A0A195E378   A0A151K0M4   A0A195C8Y6   A0A3Q0J714   E2ABN0   E2BV02   A0A2A3E7M9   A0A232ERQ4   A0A088AHA6   E9INZ6   A0A0M8ZX05   A0A0C9R4U6   A0A2S2NLC9   A0A2H8TJV2   J9K7R3   A0A3L8D3H1   A0A026X1L2   A0A158NVL4   T1GZ20   A0A1J1IQQ4   B0X2C5   B0WRA7   A0A2P8XUJ1   Q170B5   A0A336LF49   A0A2J7QF90   A0A2P8XY88   A0A0T6AWB3   A0A182VUI2   A0A1W7R7Q0   A0A182RAY1   A0A182F4R4   A0A182YDP1   Q7PVG8   A0A067R6A5   A0A182L6G2   A0A182PG15   A0A182UZV9   A0A182X0R9   A0A182HGF6   W5J8E2   A0A182UD40   A0A151K0W3   A0A1S4H1E9   A0A151X5C5   A0A195E432   F4WGZ1   A0A195CAR7   A0A182Q6U5   A0A158NVL3   E2BV03   A0A182NU62   A0A195BU21   A0A084VWH5   A0A0J7KX35   A0A1B0ETQ6   A0A154P065   A0A182J3G0   H9IZL9   C4WT38   A0A3L8D4I0   A0A212EL40   A0A2A4JTA8   A0A2J7Q0Z2   A0A0M8ZWP7   A0A067QW30   A0A0C9R3T7   A0A0C9R3U4   K7IWM2   A0A232ERR7   A0A2A3E6W9   A0A088AHA7  

Pubmed

19121390    26354079    22118469    18362917    19820115    20566863    + More
22516182    23537049    28004739    26334808    21719571    20798317    28648823    21282665    30249741    24508170    21347285    29403074    17510324    25244985    12364791    24845553    20966253    20920257    23761445    24438588    20075255   

EMBL

BABH01014467    FJ602775    ACM24341.1    KQ461103    KPJ09407.1    AF497850    + More
AAM18117.2    NWSH01000617    PCG75273.1    ODYU01012209    SOQ58392.1    KQ459606    KPI91794.1    AGBW02008706    OWR52732.1    PCG75274.1    GDJX01001287    JAT66649.1    KQ971307    EFA11278.1    DS235760    EEB16576.1    APGK01020372    APGK01047308    BT127123    KB741077    KB740193    KB631602    AEE62085.1    ENN74359.1    ENN81161.1    ERL84558.1    GEDC01026257    JAS11041.1    GBRD01000505    JAG65316.1    KQ414836    KOC60381.1    GEMB01000449    JAS02676.1    KK854167    PTY12473.1    ACPB03007775    GAHY01002352    JAA75158.1    EF091972    ABN11964.1    LJIG01001167    KRT85773.1    GEZM01075750    JAV63985.1    LBMM01002434    KMQ94840.1    KQ434786    KZC05232.1    GBGD01002014    JAC86875.1    GL888148    EGI66469.1    KQ982515    KYQ55590.1    KQ979701    KYN19620.1    KQ981248    KYN44241.1    KQ978072    KYM97292.1    GL438334    EFN69132.1    GL450776    EFN80482.1    KZ288347    PBC27514.1    NNAY01002561    OXU21044.1    GL764397    EFZ17684.1    KQ435815    KOX72647.1    GBYB01011314    JAG81081.1    GGMR01005366    MBY17985.1    GFXV01002514    MBW14319.1    ABLF02011171    QOIP01000014    RLU14796.1    KK107061    EZA61279.1    ADTU01027240    ADTU01027241    ADTU01027242    CAQQ02388143    CVRI01000054    CRL00825.1    DS232286    EDS39148.1    DS232053    EDS33291.1    PYGN01001323    PSN35678.1    CH477477    EAT40277.1    UFQS01004093    UFQT01004093    SSX16169.1    SSX35495.1    NEVH01015301    PNF27250.1    PYGN01001171    PSN36978.1    LJIG01022756    KRT78887.1    GEHC01000520    JAV47125.1    AAAB01008984    EAA15071.4    KK852670    KDR18800.1    APCN01004224    ADMH02001962    ETN60231.1    KYN44242.1    KYQ55591.1    KYN19619.1    EGI66470.1    KYM97291.1    AXCN02000773    EFN80483.1    KQ976409    KYM90970.1    ATLV01017588    KE525174    KFB42319.1    KMQ94839.1    AJWK01010323    AJWK01010324    KZC05233.1    AK340452    BAH71058.1    RLU15041.1    AGBW02014147    OWR42187.1    PCG75275.1    PCG75276.1    NEVH01019960    PNF22244.1    KOX72645.1    LC382016    KK852945    BBE00746.1    KDR13443.1    GBYB01001481    JAG71248.1    GBYB01001486    JAG71253.1    OXU21045.1    PBC27513.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268    UP000007151    UP000007266    + More
UP000192223    UP000009046    UP000019118    UP000030742    UP000053825    UP000015103    UP000036403    UP000076502    UP000007755    UP000075809    UP000078492    UP000078541    UP000078542    UP000079169    UP000000311    UP000008237    UP000242457    UP000215335    UP000005203    UP000053105    UP000007819    UP000279307    UP000053097    UP000005205    UP000015102    UP000183832    UP000002320    UP000245037    UP000008820    UP000235965    UP000075920    UP000075900    UP000069272    UP000076408    UP000007062    UP000027135    UP000075882    UP000075885    UP000075903    UP000076407    UP000075840    UP000000673    UP000075902    UP000075886    UP000075884    UP000078540    UP000030765    UP000092461    UP000075880    UP000002358   

PRIDE

H9IZL8    B9VTR5    H9IZL9   

Pfam

PF00061   Lipocalin        + More
PF08212   Lipocalin_2

Interpro

IPR000566   Lipocln_cytosolic_FA-bd_dom        + More
IPR012674   Calycin       
IPR003057   Invtbrt_color       
IPR022272   Lipocalin_CS       
IPR022271   Lipocalin_ApoD       
IPR002969   ApolipopD       
IPR002446   Lipocalin_bac       

SUPFAM

SSF50814   SSF50814       

Gene 3D

2.40.128.20    

ProteinModelPortal

H9IZL8   B9VTR5   A0A194QVB0   Q8T5Q9   A0A2A4JUV9   A0A2H1WZF6   + More
A0A194PGG0   A0A212FG74   A0A2A4JUH0   A0A1D1ZII0   D6W7I9   A0A1W4WNZ9   E0VT70   J3JV57   A0A1B6CC82   A0A0K8TIR9   A0A0L7QPH9   A0A161MKB5   A0A2R7VY94   R4G7P7   A3EXQ4   A0A0T6BF28   A0A1Y1KWD0   A0A0J7NQV0   A0A154P066   A0A069DSJ7   F4WGZ0   A0A151X5N1   A0A195E378   A0A151K0M4   A0A195C8Y6   A0A3Q0J714   E2ABN0   E2BV02   A0A2A3E7M9   A0A232ERQ4   A0A088AHA6   E9INZ6   A0A0M8ZX05   A0A0C9R4U6   A0A2S2NLC9   A0A2H8TJV2   J9K7R3   A0A3L8D3H1   A0A026X1L2   A0A158NVL4   T1GZ20   A0A1J1IQQ4   B0X2C5   B0WRA7   A0A2P8XUJ1   Q170B5   A0A336LF49   A0A2J7QF90   A0A2P8XY88   A0A0T6AWB3   A0A182VUI2   A0A1W7R7Q0   A0A182RAY1   A0A182F4R4   A0A182YDP1   Q7PVG8   A0A067R6A5   A0A182L6G2   A0A182PG15   A0A182UZV9   A0A182X0R9   A0A182HGF6   W5J8E2   A0A182UD40   A0A151K0W3   A0A1S4H1E9   A0A151X5C5   A0A195E432   F4WGZ1   A0A195CAR7   A0A182Q6U5   A0A158NVL3   E2BV03   A0A182NU62   A0A195BU21   A0A084VWH5   A0A0J7KX35   A0A1B0ETQ6   A0A154P065   A0A182J3G0   H9IZL9   C4WT38   A0A3L8D4I0   A0A212EL40   A0A2A4JTA8   A0A2J7Q0Z2   A0A0M8ZWP7   A0A067QW30   A0A0C9R3T7   A0A0C9R3U4   K7IWM2   A0A232ERR7   A0A2A3E6W9   A0A088AHA7  

PDB

2HZR     E-value=2.02766e-10,     Score=151

KEGG

100286767    K03098 apolipoprotein D and lipocalin family protein | (RefSeq) 32 kDa apolipoprotein

GO

GO:0031409   GO:0005737   GO:0006629   GO:0000302   GO:0016021   GO:0007568   GO:0008289   GO:0006869   GO:0005215  

Length:

122

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00566

Exp number, first 60 AAs:

0.00036

Total prob of N-in:

0.22314

outside

1  -  122

 

 

Pi

208.063321

Theta

144.93097

Tajima's D

1.333272

CLR

0.997407

CSRT

0.749662516874156

Interpretation

Uncertain