Gene

KWMTBOMO02506

Pre Gene Modal

BGIBMGA002704

Annotation

PREDICTED:_apolipoprotein_D-like_[Amyelois_transitella]

Location

Bomo_Chr5(-):3752429-3760425      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.36

CDS

ATGATGCCTCTACAGTTCCAGATGTCTATATTACGCGCTATAGCAGTATTCTTCAGTGTATTGATGTTCGTGAGTTTATGCGGATCTCAAATAATAATGCCGGGACAATGCCCAGACGTCAAGGCTATGGAAAATTTTGACCCCGCTCGGTATTTAGGAAAATGGTATGAAGCTGAGAAATATTTCTTTCTGTTTGAATTCGGAGGGAAATGCGTCACGGCCGATTACAAACTACGAGATGATGGAGCCATTCGGGTTCTTAATAAACAAATAGATATATTCTCAGGTATCCAAAAGGAAATAAAAGGGGAAGCGACGCAAGTCGGTCGTTCTGACGAAGCCAAGCTGTCAGTCCGGTTCCCTACCCTACCGGTCGATGTAGCAGCCCCATATTGGGTTGTGGATACCGACTATGATAATTACGCAGTCGTTTGGAGCTGTTATGAGTTTGGAATATTTCACACAGTTAACTCCTGGATATTAACGAGACAACAAAATCCACCAAAATCTGTATTGGACGCGGCTTACGACGCGATCGATAAGAATCGAATCAGCCGAAAATTCTTCCTGAAGACTGATCAAAGTGATTGCACTAATTTCGACGAATAA

Protein

MMPLQFQMSILRAIAVFFSVLMFVSLCGSQIIMPGQCPDVKAMENFDPARYLGKWYEAEKYFFLFEFGGKCVTADYKLRDDGAIRVLNKQIDIFSGIQKEIKGEATQVGRSDEAKLSVRFPTLPVDVAAPYWVVDTDYDNYAVVWSCYEFGIFHTVNSWILTRQQNPPKSVLDAAYDAIDKNRISRKFFLKTDQSDCTNFDE

Similarity

Belongs to the calycin superfamily. Lipocalin family.

Uniprot

H9IZL9   A0A2A4JTA8   A0A2H1W3W0   A0A212EL40   A0A194QV48   I4DMT9   + More
A0A194PFJ2   I4DKT9   A0A154P065   A0A2J7QF90   E2BV03   A0A195E432   F4WGZ1   A0A158NVL3   A0A195CAR7   A0A3L8D4I0   A0A067R6A5   A0A151K0W3   A0A0M8ZWP7   A0A2P8XY88   A0A195BU21   A0A151X5C5   K7IWM2   A0A2A3E6W9   A0A232ERR7   A0A088AHA7   A0A0L7QP33   A0A026X1L2   E2ABN0   E9INZ6   A0A1B6CC82   A0A0C9R3U4   A0A0L7KT27   U5ERU8   A0A182IND6   W5JBK4   A0A2A4JUV9   A0A182QID5   A0A182M3P1   A0A2H1WZF6   A0A084VWH3   Q8T5Q9   A0A336M3D4   A0A1W4WNZ9   Q7PVG9   B9VTR5   A0A1S4H0P2   A0A088AHA6   A0A182F4R4   A0A182HGF7   A0A182NU62   A0A182X0S0   A0A2A3E7M9   A0A212FG74   A0A182UG51   A0A182UP05   E0VT70   A0A182L6F7   A0A0L7QPH9   J3JV57   A0A1D1ZII0   A0A194QVB0   A3EXQ4   A0A1Y1KWD0   A0A0M8ZX05   A0A161MKB5   A0A3Q0J714   A0A1D2MCK2   A0A182PG15   A0A154P066   A0A0J7NQV0   E2BV02   D6W7I9   J9K7R3   R4G7P7   A0A2H8TJV2   A0A0C9R4U6   A0A182RAY1   A0A2R7VY94   A0A1J1IQQ4   A0A195E378   F4WGZ0   A0A151K0M4   A0A0L0C2Y9   A0A182YDP1   A0A2S2NLC9   A0A0T6BF28   A0A182VUI2   B0X2C5   A0A194PGG0   A0A195C8Y6   A0A0K8TIR9   Q170B5   A0A151X5N1   A0A069DSJ7   A0A0C9PV64   H9IZL8   B0WRA7  

Pubmed

19121390    22118469    26354079    22651552    20798317    21719571    + More
21347285    30249741    24845553    29403074    20075255    28648823    24508170    21282665    26227816    20920257    23761445    24438588    12364791    20566863    20966253    22516182    23537049    28004739    27289101    18362917    19820115    26108605    25244985    17510324    26334808   

EMBL

BABH01014467    NWSH01000617    PCG75275.1    PCG75276.1    ODYU01006132    SOQ47717.1    + More
AGBW02014147    OWR42187.1    KQ461103    KPJ09408.1    AK402607    BAM19229.1    KQ459606    KPI91793.1    AK401907    BAM18529.1    KQ434786    KZC05233.1    NEVH01015301    PNF27250.1    GL450776    EFN80483.1    KQ979701    KYN19619.1    GL888148    EGI66470.1    ADTU01027240    KQ978072    KYM97291.1    QOIP01000014    RLU15041.1    KK852670    KDR18800.1    KQ981248    KYN44242.1    KQ435815    KOX72645.1    PYGN01001171    PSN36978.1    KQ976409    KYM90970.1    KQ982515    KYQ55591.1    KZ288347    PBC27513.1    NNAY01002561    OXU21045.1    KQ414836    KOC60382.1    KK107061    EZA61279.1    GL438334    EFN69132.1    GL764397    EFZ17684.1    GEDC01026257    JAS11041.1    GBYB01001486    JAG71253.1    JTDY01005958    KOB66432.1    GANO01002669    JAB57202.1    ADMH02001962    ETN60230.1    PCG75273.1    AXCN02000773    AXCM01002460    ODYU01012209    SOQ58392.1    ATLV01017586    ATLV01017587    KE525174    KFB42317.1    AF497850    AAM18117.2    UFQS01000495    UFQT01000495    SSX04381.1    SSX24745.1    AAAB01008984    EAA14934.4    FJ602775    ACM24341.1    APCN01004224    PBC27514.1    AGBW02008706    OWR52732.1    DS235760    EEB16576.1    KOC60381.1    APGK01020372    APGK01047308    BT127123    KB741077    KB740193    KB631602    AEE62085.1    ENN74359.1    ENN81161.1    ERL84558.1    GDJX01001287    JAT66649.1    KPJ09407.1    EF091972    ABN11964.1    GEZM01075750    JAV63985.1    KOX72647.1    GEMB01000449    JAS02676.1    LJIJ01001820    ODM90726.1    KZC05232.1    LBMM01002434    KMQ94840.1    EFN80482.1    KQ971307    EFA11278.1    ABLF02011171    ACPB03007775    GAHY01002352    JAA75158.1    GFXV01002514    MBW14319.1    GBYB01011314    JAG81081.1    KK854167    PTY12473.1    CVRI01000054    CRL00825.1    KYN19620.1    EGI66469.1    KYN44241.1    JRES01000962    KNC26690.1    GGMR01005366    MBY17985.1    LJIG01001167    KRT85773.1    DS232286    EDS39148.1    KPI91794.1    KYM97292.1    GBRD01000505    JAG65316.1    CH477477    EAT40277.1    KYQ55590.1    GBGD01002014    JAC86875.1    GBYB01005273    JAG75040.1    DS232053    EDS33291.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000076502    + More
UP000235965    UP000008237    UP000078492    UP000007755    UP000005205    UP000078542    UP000279307    UP000027135    UP000078541    UP000053105    UP000245037    UP000078540    UP000075809    UP000002358    UP000242457    UP000215335    UP000005203    UP000053825    UP000053097    UP000000311    UP000037510    UP000075880    UP000000673    UP000075886    UP000075883    UP000030765    UP000192223    UP000007062    UP000069272    UP000075840    UP000075884    UP000076407    UP000075902    UP000075903    UP000009046    UP000075882    UP000019118    UP000030742    UP000079169    UP000094527    UP000075885    UP000036403    UP000007266    UP000007819    UP000015103    UP000075900    UP000183832    UP000037069    UP000076408    UP000075920    UP000002320    UP000008820   

PRIDE

H9IZL9    B9VTR5    H9IZL8   

Pfam

PF08212   Lipocalin_2        + More
PF00061   Lipocalin

Interpro

IPR022271   Lipocalin_ApoD        + More
IPR012674   Calycin       
IPR003057   Invtbrt_color       
IPR000566   Lipocln_cytosolic_FA-bd_dom       
IPR022272   Lipocalin_CS       
IPR002969   ApolipopD       
IPR002446   Lipocalin_bac       

SUPFAM

SSF50814   SSF50814       

Gene 3D

2.40.128.20    

ProteinModelPortal

H9IZL9   A0A2A4JTA8   A0A2H1W3W0   A0A212EL40   A0A194QV48   I4DMT9   + More
A0A194PFJ2   I4DKT9   A0A154P065   A0A2J7QF90   E2BV03   A0A195E432   F4WGZ1   A0A158NVL3   A0A195CAR7   A0A3L8D4I0   A0A067R6A5   A0A151K0W3   A0A0M8ZWP7   A0A2P8XY88   A0A195BU21   A0A151X5C5   K7IWM2   A0A2A3E6W9   A0A232ERR7   A0A088AHA7   A0A0L7QP33   A0A026X1L2   E2ABN0   E9INZ6   A0A1B6CC82   A0A0C9R3U4   A0A0L7KT27   U5ERU8   A0A182IND6   W5JBK4   A0A2A4JUV9   A0A182QID5   A0A182M3P1   A0A2H1WZF6   A0A084VWH3   Q8T5Q9   A0A336M3D4   A0A1W4WNZ9   Q7PVG9   B9VTR5   A0A1S4H0P2   A0A088AHA6   A0A182F4R4   A0A182HGF7   A0A182NU62   A0A182X0S0   A0A2A3E7M9   A0A212FG74   A0A182UG51   A0A182UP05   E0VT70   A0A182L6F7   A0A0L7QPH9   J3JV57   A0A1D1ZII0   A0A194QVB0   A3EXQ4   A0A1Y1KWD0   A0A0M8ZX05   A0A161MKB5   A0A3Q0J714   A0A1D2MCK2   A0A182PG15   A0A154P066   A0A0J7NQV0   E2BV02   D6W7I9   J9K7R3   R4G7P7   A0A2H8TJV2   A0A0C9R4U6   A0A182RAY1   A0A2R7VY94   A0A1J1IQQ4   A0A195E378   F4WGZ0   A0A151K0M4   A0A0L0C2Y9   A0A182YDP1   A0A2S2NLC9   A0A0T6BF28   A0A182VUI2   B0X2C5   A0A194PGG0   A0A195C8Y6   A0A0K8TIR9   Q170B5   A0A151X5N1   A0A069DSJ7   A0A0C9PV64   H9IZL8   B0WRA7  

PDB

2HZR     E-value=2.59632e-27,     Score=300

KEGG

101742419    K03098 apolipoprotein D and lipocalin family protein | (RefSeq) apolipoprotein D-like

GO

GO:0031409   GO:0007568   GO:0008289   GO:0006869   GO:0005215   GO:0016021   GO:0006629   GO:0000302   GO:0005737   GO:0006355   GO:0016020   GO:0003824   GO:0003997   GO:0005777   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

SignalP

Position:   1 - 29,         Likelihood:  0.804018

 

 

Length:

202

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

23.56423

Exp number, first 60 AAs:

21.47145

Total prob of N-in:

0.78733

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  35

outside

36  -  202

 

 

Pi

291.494881

Theta

175.104187

Tajima's D

2.614545

CLR

0.303353

CSRT

0.954552272386381

Interpretation

Uncertain