Gene

KWMTBOMO02502

Pre Gene Modal

BGIBMGA002707

Annotation

hypothetical_protein_KGM_13702_[Danaus_plexippus]

Location

Bomo_Chr5(-):3565703-3566731      View in EpiBrowser

Transcription factor

TSC22

Location in the cell

Cytoplasmic   Reliability : 1.54 Extracellular   Reliability : 1.19 Nuclear   Reliability : 1.372

CDS

ATGATTGACGTCGTGCAAAAACCTAGAGATGCCTGCCTCTACGAAATCAGACAGAGGGGACAAAAGGAACCCTGTTACGTGGTCGTGCCTAATCCAAAAGATCTGGTTAAGAGCCACTTGATGTTCGCGGTGCGCGAAGAAGTCGAGGTACTGAAGGAGCGCATCGCCGAACTGATGGAAAGGATCACCCAGTTGGAAGTGGAGAACACTTATTTGCGTGCGCACGCGAGTCAAGATACGCTAGCGCAGTTGCCCGCGGCCCAGGGCAACAAGCCCGCCGCGCAGCCGCAACCCCCGGTGTCGTAA

Protein

MIDVVQKPRDACLYEIRQRGQKEPCYVVVPNPKDLVKSHLMFAVREEVEVLKERIAELMERITQLEVENTYLRAHASQDTLAQLPAAQGNKPAAQPQPPVS

Uniprot

H9IZM2   A0A212EPC3   I4DRF6   A0A194PES9   A0A194QVS0   A0A0L7LRP3   + More
A0A2P8YD47   A0A182W8L2   A0A182R1S8   A0A182KAC1   A0A182XHB9   A0A182JGP9   A0A182F325   A0A1I8QAX0   A0A182MS00   T1PDM5   A0A2M3Z5W3   A0A2M3ZHU5   A0A084VAF7   A0A3F2YX67   A0A182NNV1   A0A2M4AIZ9   A0A2M4CWN0   A0A1A9WZP9   A0A2M4CV47   A0A2M4CV83   A0A182GU24   Q171D7   A0A226EUN7   B0WGA5   A0A1Q3FNF0   A0A1Q3FMJ9   A0A336MDA9   X2J847  

Pubmed

19121390    22118469    22651552    26354079    26227816    29403074    + More
24438588    26483478    17510324    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867   

EMBL

BABH01014476    AGBW02013516    OWR43307.1    AK405097    BAM20496.1    KQ459606    + More
KPI91782.1    KQ461103    KPJ09414.1    JTDY01000238    KOB78117.1    PYGN01000690    PSN42182.1    AXCM01000664    KA646013    AFP60642.1    GGFM01003158    MBW23909.1    GGFM01007247    MBW27998.1    ATLV01003493    KE524146    KFB34951.1    AXCN02001987    AXCN02001988    AXCN02001989    GGFK01007448    MBW40769.1    GGFL01005080    MBW69258.1    GGFL01005039    MBW69217.1    GGFL01005079    MBW69257.1    JXUM01002459    KQ560139    KXJ84225.1    CH477459    EAT40589.1    LNIX01000002    OXA60336.1    DS231924    EDS26843.1    GFDL01006027    JAV29018.1    GFDL01006205    JAV28840.1    UFQS01000407    UFQT01000407    SSX03653.1    SSX24018.1    AE014134    AHN54389.1   

Proteomes

UP000005204    UP000007151    UP000053268    UP000053240    UP000037510    UP000245037    + More
UP000075920    UP000075900    UP000075881    UP000076407    UP000075880    UP000069272    UP000095300    UP000075883    UP000030765    UP000075886    UP000075884    UP000091820    UP000069940    UP000249989    UP000008820    UP000198287    UP000002320    UP000000803   

PRIDE

H9IZM2    X2J847   

Pfam

PF01166   TSC22

Interpro

IPR000580   TSC-22_Dip_Bun       

ProteinModelPortal

H9IZM2   A0A212EPC3   I4DRF6   A0A194PES9   A0A194QVS0   A0A0L7LRP3   + More
A0A2P8YD47   A0A182W8L2   A0A182R1S8   A0A182KAC1   A0A182XHB9   A0A182JGP9   A0A182F325   A0A1I8QAX0   A0A182MS00   T1PDM5   A0A2M3Z5W3   A0A2M3ZHU5   A0A084VAF7   A0A3F2YX67   A0A182NNV1   A0A2M4AIZ9   A0A2M4CWN0   A0A1A9WZP9   A0A2M4CV47   A0A2M4CV83   A0A182GU24   Q171D7   A0A226EUN7   B0WGA5   A0A1Q3FNF0   A0A1Q3FMJ9   A0A336MDA9   X2J847  

PDB

1DIP     E-value=3.55401e-08,     Score=131

KEGG

101742811    no KO assigned | (RefSeq) protein bunched, class 2/F/G isoform-like

GO

GO:0003700   GO:0006355   GO:0016020   GO:0003824   GO:0003997   GO:0005777   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

Length:

101

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.40019

outside

1  -  101

 

 

Pi

157.920067

Theta

191.261064

Tajima's D

-0.548608

CLR

661.524143

CSRT

0.232438378081096

Interpretation

Possibly Positive selection