Gene

KWMTBOMO02500  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002582

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_mitochondrial-processing_peptidase_subunit_beta-like_[Bombyx_mori]

Location

Bomo_Chr5(+):3544402-3545874      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.32

CDS

ATGTTGAAAGTAGCAACCACTTTGAGAGTAATTTCCAGCCAGGGCAATCAGGTACGTACGTTAGCAACCGCAGCTGCATACAAACAGGCATTAGTAAATGTTCCACCGACTAAACTCACAGTACTCGATAATGGTTTGCGTATTGCTACTGAAGATTCGGGAGCCGCCACTGCCACTGTAGGACTCTGGATCGACGCTGGCTCCCGCTATGAAACCTCCAAGAACAATGGTGTCGCTCATTTCCTTGAACACATGGCTTTTAAAGGTACTAGTAAAAGATCACAGACGGACTTAGAACTACTGGTAGAAAACATGGGTGCACACTTGAACGCCTACACGTCCCGGGAACAAACAGTTTTTTACGCAAAATGCCTCGCTAATGACGTCCCCGTAGCAGTAGAGATCCTTGCTGATATCATACAGAATTCCTCCCTCGCCGAACCCGAAATCGAACGAGAACGCGGTGTCATTCTTCGCGAAATGCAAGATGTCGAAAGTAACCTTCAGGAGGTTGTGTTTGATCACCTTCACGCAACAGCATTCCAAGGTACCCCATTGGGTCAAACAATTCTTGGACCTACCAAAAATATTAAGAAAATCTCTAAGGCTGACCTACAGAGCTACATTAGGAACCACTATCAACCTGGACGTATTGTTTTGTCTGGAGCTGGTGGAGTTGAACATGAAAGGTTAGTAGATCTGGCCAGTAAGCATTTTAGTGGATTAAAGAACTCAGCATGTGATGTTGAGCTGACACCCTGCAGATATACTGGATCAGAGATCAGGGTCCGTGATGATTCAATGCCGCTAGCTCATGTAGCTATAGCTGTTGAGGGAGCTGGTTGGACTGATGCTGACAACATTCCTTTGATGGTTGCCAACACTCTTATTGGTGCCTGGGACCGCTCTCAAGGTGGTGGTGCCAATAATGCTTCATACCTAGCGCGTGCTGCCTCAGTGGGCAACCTCTGCCACAGTTTCCAGTCCTTCAACACTTGTTATAAAGACACTGGTCTATGGGGCATTTACTTTGTAGCTGAGAGTCTACAACTTGACGATATGTTATATAACATCCAGAAGGAATGGATGAAACTCTGTACATCTGTAACTGAAGGTGAAGTTGAGCGTGCTAAGAACTTACTCAAGACCAACATGCTTTTGCAACTTGATGGAACCACTCCTGTCTGTGAAGATATTGGTCGTCAAATGCTCTGCTACAACAGACGCATCCCCATCCATGAACTTGATGCTCGTATTGAATCTGTTACTGTACAGAATGTACGTGATGTTTGCTACAAATACTTATTTGACCGTTGTCCAGCTGTAGCTGCCGTTGGACCTACTGAAGGTCTTCCTGACTACACTAGGATTCGTGGTGGAATGTACTGGGTCAGGGCTTAA

Protein

MLKVATTLRVISSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDVESNLQEVVFDHLHATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAGGVEHERLVDLASKHFSGLKNSACDVELTPCRYTGSEIRVRDDSMPLAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCHSFQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIGRQMLCYNRRIPIHELDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIRGGMYWVRA

Similarity

Belongs to the peptidase M16 family.

Uniprot

A0A2A4JTD4   A0A2H1VE55   A0A194QVC2   I4DK27   A0A0L7LMY8   H9IZ97   + More
A0A0L0CB92   A0A1I8NRV4   T1PD60   A0A1W4VMN1   B4K945   A0A1L8EEG7   W8B9H4   B4PSN4   A0A0A1XFT2   A0A034VJX9   A0A0M4F4P0   A0A182FIQ4   B4QZ72   B4HE39   Q9VFF0   B3P3P8   A0A2M4A819   A0A0K8TS24   B4JF35   A0A2M4A748   A0A2M4BLW9   B4M411   T1DMV8   B4NJ55   A0A2M3Z0P8   U5ETG1   W5JN85   B3LWQ6   A0A182K790   A0A084VIU0   A0A232EKT3   A0A3B0KHU6   A0A182J6J8   A0A182VKS0   A0A182TZE6   A0A182X960   Q7PSV0   A0A1A9VFS3   A0A182IDK5   A0A182MA04   A0A182T1J9   Q29AI0   A0A182Y4W8   D3TRB5   A0A1A9ZZ69   Q17A09   A0A182RVI9   A0A1A9YT06   A0A1B0B3C0   A0A1L8DTM4   B4G6F2   A0A182PL50   A0A1A9WYN4   A0A182WQY9   D3TRB1   K7IPF7   A0A023ESS2   A0A182QFE4   A0A0P4VUN1   R4G4U9   A0A182N0I7   E9GEU2   A0A336LZN4   A0A240SWL7   A0A240SXE2   A0A161MLQ6   T1GBH9   B0X1S0   E2AL22   A0A023F9T0   A0A2A3ENP6   V9IID0   A0A067R6C1   A0A088A820   A0A1Q3FJ85   A0A224XJ82   A0A0V0G3H4   A0A0N8B320   A0A0P5LT03   A0A0P5MNI0   A0A0C9PY15   A0A0P5K6G8   A0A164RZD6   A0A1B0FI28   A0A0P5AUN9   E9I894   A0A0J7L6X0   A0A1B6GLP2   A0A0P5FZP2   E2BHD1   A0A0N8ARF2   A0A0P5LR24   A0A2J7PY28   A0A0P5FU69  

Pubmed

26354079    22651552    26227816    19121390    26108605    25315136    + More
17994087    24495485    17550304    25830018    25348373    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26369729    20920257    23761445    24438588    28648823    12364791    14747013    17210077    15632085    25244985    20353571    17510324    20075255    24945155    26483478    27129103    21292972    20798317    25474469    24845553    21282665   

EMBL

NWSH01000617    PCG75271.1    ODYU01002058    SOQ39097.1    KQ461103    KPJ09417.1    + More
AK401645    BAM18267.1    JTDY01000495    KOB76918.1    BABH01014478    JRES01000641    KNC29683.1    KA646050    AFP60679.1    CH933806    EDW14458.1    GFDG01001711    JAV17088.1    GAMC01008640    JAB97915.1    CM000160    EDW97530.1    GBXI01004480    JAD09812.1    GAKP01016525    JAC42427.1    CP012526    ALC46345.1    CM000364    EDX12900.1    CH480815    EDW42131.1    AE014297    AY058243    AAF55110.2    AAL13472.1    AAN13622.1    CH954181    EDV48936.1    GGFK01003623    MBW36944.1    GDAI01000451    JAI17152.1    CH916369    EDV93316.1    GGFK01003137    MBW36458.1    GGFJ01004938    MBW54079.1    CH940652    EDW59372.1    GAMD01003405    JAA98185.1    CH964272    EDW83848.1    GGFM01001339    MBW22090.1    GANO01002793    JAB57078.1    ADMH02001041    ETN64350.1    CH902617    EDV42694.1    ATLV01013404    KE524855    KFB37884.1    NNAY01003732    OXU18931.1    OUUW01000013    SPP88030.1    AAAB01008811    EAA04978.5    APCN01004712    AXCM01001160    CM000070    EAL27370.1    EZ423967    ADD20243.1    CH477341    EAT43098.1    EJY57583.1    JXJN01007808    GFDF01004350    JAV09734.1    CH479179    EDW23910.1    EZ423963    ADD20239.1    JXUM01121409    GAPW01001258    KQ566497    JAC12340.1    KXJ70078.1    AXCN02002488    GDKW01000857    JAI55738.1    ACPB03023307    GAHY01000441    JAA77069.1    GL732541    EFX81896.1    UFQS01000350    UFQT01000350    SSX03088.1    SSX23454.1    JXJN01002847    GEMB01002202    JAS00978.1    CAQQ02103929    DS232268    EDS38798.1    GL440429    EFN65875.1    GBBI01000953    JAC17759.1    KZ288203    PBC33358.1    JR048973    AEY60820.1    KK852856    KDR14885.1    GFDL01007398    JAV27647.1    GFTR01006548    JAW09878.1    GECL01003480    JAP02644.1    GDIQ01217699    JAK34026.1    GDIQ01166182    JAK85543.1    GDIQ01176665    JAK75060.1    GBYB01006418    JAG76185.1    GDIQ01189962    JAK61763.1    LRGB01002121    KZS09086.1    CCAG010001331    GDIP01197742    JAJ25660.1    GL761538    EFZ23184.1    LBMM01000445    KMQ98323.1    GECZ01006439    JAS63330.1    GDIQ01251689    JAK00036.1    GL448287    EFN84900.1    GDIQ01250243    JAK01482.1    GDIQ01176666    JAK75059.1    NEVH01020851    PNF21226.1    GDIQ01250244    JAK01481.1   

Proteomes

UP000218220    UP000053240    UP000037510    UP000005204    UP000037069    UP000095300    + More
UP000095301    UP000192221    UP000009192    UP000002282    UP000092553    UP000069272    UP000000304    UP000001292    UP000000803    UP000008711    UP000001070    UP000008792    UP000007798    UP000000673    UP000007801    UP000075881    UP000030765    UP000215335    UP000268350    UP000075880    UP000075903    UP000075902    UP000076407    UP000007062    UP000078200    UP000075840    UP000075883    UP000075901    UP000001819    UP000076408    UP000092445    UP000008820    UP000075900    UP000092443    UP000092460    UP000008744    UP000075885    UP000091820    UP000075920    UP000002358    UP000069940    UP000249989    UP000075886    UP000015103    UP000075884    UP000000305    UP000015102    UP000002320    UP000000311    UP000242457    UP000027135    UP000005203    UP000076858    UP000092444    UP000036403    UP000008237    UP000235965   

PRIDE

H9IZ97    A0A088A820   

Pfam

PF00675   Peptidase_M16        + More
PF05193   Peptidase_M16_C
PF16317   Glyco_hydro_99
PF10545   MADF_DNA_bdg

Interpro

IPR011249   Metalloenz_LuxS/M16        + More
IPR011765   Pept_M16_N       
IPR001431   Pept_M16_Zn_BS       
IPR007863   Peptidase_M16_C       
IPR037718   MPP_beat       
IPR006578   MADF-dom       
IPR026071   Glyco_Hydrolase_99       

SUPFAM

SSF63411   SSF63411       

CDD

cd11574  GH99

ProteinModelPortal

A0A2A4JTD4   A0A2H1VE55   A0A194QVC2   I4DK27   A0A0L7LMY8   H9IZ97   + More
A0A0L0CB92   A0A1I8NRV4   T1PD60   A0A1W4VMN1   B4K945   A0A1L8EEG7   W8B9H4   B4PSN4   A0A0A1XFT2   A0A034VJX9   A0A0M4F4P0   A0A182FIQ4   B4QZ72   B4HE39   Q9VFF0   B3P3P8   A0A2M4A819   A0A0K8TS24   B4JF35   A0A2M4A748   A0A2M4BLW9   B4M411   T1DMV8   B4NJ55   A0A2M3Z0P8   U5ETG1   W5JN85   B3LWQ6   A0A182K790   A0A084VIU0   A0A232EKT3   A0A3B0KHU6   A0A182J6J8   A0A182VKS0   A0A182TZE6   A0A182X960   Q7PSV0   A0A1A9VFS3   A0A182IDK5   A0A182MA04   A0A182T1J9   Q29AI0   A0A182Y4W8   D3TRB5   A0A1A9ZZ69   Q17A09   A0A182RVI9   A0A1A9YT06   A0A1B0B3C0   A0A1L8DTM4   B4G6F2   A0A182PL50   A0A1A9WYN4   A0A182WQY9   D3TRB1   K7IPF7   A0A023ESS2   A0A182QFE4   A0A0P4VUN1   R4G4U9   A0A182N0I7   E9GEU2   A0A336LZN4   A0A240SWL7   A0A240SXE2   A0A161MLQ6   T1GBH9   B0X1S0   E2AL22   A0A023F9T0   A0A2A3ENP6   V9IID0   A0A067R6C1   A0A088A820   A0A1Q3FJ85   A0A224XJ82   A0A0V0G3H4   A0A0N8B320   A0A0P5LT03   A0A0P5MNI0   A0A0C9PY15   A0A0P5K6G8   A0A164RZD6   A0A1B0FI28   A0A0P5AUN9   E9I894   A0A0J7L6X0   A0A1B6GLP2   A0A0P5FZP2   E2BHD1   A0A0N8ARF2   A0A0P5LR24   A0A2J7PY28   A0A0P5FU69  

PDB

5GUP     E-value=5.81377e-159,     Score=1440

KEGG

101742956    K17732 mitochondrial-processing peptidase subunit beta [EC:3.4.24.64] | (RefSeq) mitochondrial-proce

GO

GO:0046872   GO:0004222   GO:0017087   GO:0006627   GO:0008121   GO:0005743   GO:0005759   GO:0005739   GO:0016485   GO:0005750   GO:0006122   GO:0016798   GO:0016021   GO:0006508   GO:0003824   GO:0003997   GO:0005777   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

PANTHER

PTHR11851:SF103  

Length:

466

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0036

Exp number, first 60 AAs:

0.000920000000000001

Total prob of N-in:

0.00710

outside

1  -  466

 

 

Pi

200.832039

Theta

199.129552

Tajima's D

0.155308

CLR

291.206589

CSRT

0.413679316034198

Interpretation

Uncertain