SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02499
Pre Gene Modal
BGIBMGA002709
Annotation
PREDICTED:_mitochondrial_folate_transporter/carrier_[Papilio_polytes]
Location in the cell
Mitochondrial   Reliability : 1.335
 

Sequence

CDS
ATGCTCAGGGAGGATTCGGTTAGACGTTCAATGCAACCACCTTACTCTGGTCCTCATAGAGTTATATCTAGAGCCGAGGACGGAAAAACGTGGTCGATTGATGTAAAAGGGAAACAGGTGACGGTCAGTGTCGACAGAATTAAGCCAGCTTTCGTCGAGCATTCTTTAGTAGATCTCGTTCCAGCACCAGCACCGCGGGTTTCTGTGCCTCAACCAGCGCAACCGGATGCTACTAATGTCCCTTCATGTCCACTCGTGCCTTCGGCACCTCTAACTGCTACTCCTACACATACACCTCAATATATCACCCGGGAGGATTCGGTTAGACGTTCAATGCAACCACCTTACTCTGGTCCTCATAGAGTTATATCTAGAGCCGAGGACGGAAAAACGTGGTCGATTGATGTAAAAGGGAAACAGGTGACGGTCAGTGTCGACAGAATTAAGCCAGCTTTCGTCGAGCATTCTTTAGTAGATCTCGTTCCAGCACCAGCACCGCGGGTTTCTGTGCCTCAACCAGCGCAACCGGATGCTACTAATGTCCCTTCATGTCCACTCGTGCCTTCGGCACCTCTAACTGCTACTCCTACACATACACCTCAATATACCACCCGGTCAGTAAAATTCGTCATGACTACAATGAAGAACCCAAATCCGTCGTCTTCTAAGCTCGCACTCCTTAGCCACATCAAGTACGAGCACCTGGTAGCTGGTATATCAGGTGGTGTGACATCAACACTCATATTGCACCCTTTGGATTTAATAAAAATTAGATTTGCTGTGAATGATGGAAGGACGGCCACGGTACCCCGTTATGATGGTCTCAGTAGCGCTTTTGTAACCATAGTCAAGAAAGAAGGTGTTCGTGGCTTATACAGAGGAGTTACACCAAATGTCTGGGGCTCCGGTTCGGCCTGGGGATTCTACTTTCTATTTTACAATGCCATTAAAACATGGATACAAGGAGGAAACGCTCGTACTCCACTCGGTCCCGGCCTCCACATGCTGGCGGCCGCAGAAGCGGGGGTCTTGTCTCTCGTTATGACGAACCCCATATGGGTCGTGAAGACTCGCCTTTGCCTCCAGTACAGCGAGGAGCACGTGGCCGACAACAAGAGATACAAGGGGATGGTCGACGGCCTTCTGAAGATCTACAGAACCGAGGGGATCCGAGGACTTTATAGGGGATCCATGTTTATGTAG
Protein
MLREDSVRRSMQPPYSGPHRVISRAEDGKTWSIDVKGKQVTVSVDRIKPAFVEHSLVDLVPAPAPRVSVPQPAQPDATNVPSCPLVPSAPLTATPTHTPQYITREDSVRRSMQPPYSGPHRVISRAEDGKTWSIDVKGKQVTVSVDRIKPAFVEHSLVDLVPAPAPRVSVPQPAQPDATNVPSCPLVPSAPLTATPTHTPQYTTRSVKFVMTTMKNPNPSSSKLALLSHIKYEHLVAGISGGVTSTLILHPLDLIKIRFAVNDGRTATVPRYDGLSSAFVTIVKKEGVRGLYRGVTPNVWGSGSAWGFYFLFYNAIKTWIQGGNARTPLGPGLHMLAAAEAGVLSLVMTNPIWVVKTRLCLQYSEEHVADNKRYKGMVDGLLKIYRTEGIRGLYRGSMFM

Summary

Uniprot
ProteinModelPortal
PDB
2LCK     E-value=1.23072e-12,     Score=177

Ontologies

GO

Topology

Length:
400
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
25.02561
Exp number, first 60 AAs:
0
Total prob of N-in:
0.42483
outside
1  -  400
 
 

Population Genetic Test Statistics

Pi
184.048916
Theta
158.926969
Tajima's D
0.50568
CLR
116.834518
CSRT
0.523823808809559
Interpretation
Uncertain
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