SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02497
Annotation
PREDICTED:_rab-related_protein_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.372
 

Sequence

CDS
ATGCCCGACGAAGAGCCCCCTTTGCCGCCTCCTTCACCCGTCCCGCCGCGCTTTGGGCCATCGCGCCTACGCCGCACGTTGCACTCGCTTCGTTCACCGTTCCGCCCCGGTTCGCCCTTCCACATCGGCTCTATCAAACGCACAGGCTCCAGCAAGTCCGTCGCCTCAGACGGTGAGATCACGCGCGACGAACGCACGATGCGTAAACGCAATAAGAAACAACGCGAAGCGGCCGCCGAGTCCTCTCGTAGCACTGGGAGCTCGCCCGGCGACGACAAACAGAAAAAGGAAGCCGGAGGTAGTCTTCTCAAACGCATGGGTAGTATTGGTAAAAAACGCAACGAAACTCCCGCAGTATCAGCTTCTCAACCAGAAACGTCACAGTCCGTCGAGAGCGCTCCAACTCCCTCTAACGAATTAGCGCGACCGACCCCTGAACCAGTGAGCCCCATCGCTGTCGAACATGCCGTCGCTACGAGACCTTTTACGAAAGCTGCTTGGAAACGCAACAGTGTACCCGAAATGGAAAAACCCGTGGAAGAACCGAGTCCGGAAAACGCGCTACGGAGACGAGTAGCGTTTGTTAGTCAGGCTTCCGTTGGCGGTTCGGAAGATCGCGATGATGACAGGGAGAGGGGAGGGACGGAAGTGGGGTCGTTGGAAGAGGCGGTGGCGCTAGCACGCGTGAAGCTGGCCGTGGCCACACCGCCCTCGTCGTCACAGTCGCGCGACAACGACACTGAAGAGGAGGGGCACTCGGACACGATGCCTGCCTACGGAGACCTGATCGAGCCGGAGAACAAAGCCGGGAACGATGCTACGACGGTAAGTGGATGCGTTGTATGTAGCGCAACGTGCGCGTGGCCGGATCGCCGCATCGCTCGGCACGTCAGTGGACGAAGGTTCTCCGTGCGATGCGCGCGCGCCATGACCTTCGAGGAGGCAGTAGATGATTGCTACCTAACGGTGTGCGAGTGCTGTGGCTTCAGCGCCGAGACGACAGTTCTGTTCCCAGTACGTTTTATTTCACGCTAG
Protein
MPDEEPPLPPPSPVPPRFGPSRLRRTLHSLRSPFRPGSPFHIGSIKRTGSSKSVASDGEITRDERTMRKRNKKQREAAAESSRSTGSSPGDDKQKKEAGGSLLKRMGSIGKKRNETPAVSASQPETSQSVESAPTPSNELARPTPEPVSPIAVEHAVATRPFTKAAWKRNSVPEMEKPVEEPSPENALRRRVAFVSQASVGGSEDRDDDRERGGTEVGSLEEAVALARVKLAVATPPSSSQSRDNDTEEEGHSDTMPAYGDLIEPENKAGNDATTVSGCVVCSATCAWPDRRIARHVSGRRFSVRCARAMTFEEAVDDCYLTVCECCGFSAETTVLFPVRFISR

Summary

Ontologies

GO

Topology

Length:
344
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01074
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00082
outside
1  -  344
 
 

Population Genetic Test Statistics

Pi
261.885588
Theta
204.364759
Tajima's D
0.863481
CLR
0.121476
CSRT
0.622018899055047
Interpretation
Possibly Positive selection
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