Gene

KWMTBOMO02495

Pre Gene Modal

BGIBMGA002711

Annotation

Rab-related_protein_[Bombyx_mori]

Location

Bomo_Chr5(-):3471508-3481271      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.581 Mitochondrial   Reliability : 1.677

CDS

ATGTCGCCGAAACAAAAGCAACACGCCGGCAGTTCACACGCATCGGCTAGTGCTGAACGCCGGGAGCATTTATATAAGATCCTCGTCATCGGCGAATTGGGTACAGGGAAGACTTCCATAATCAAACGATATGTCCACCAGTTCTTCAGTCAACACTATAGAGCAACCATCGGCGTGGATTTCGCACTGAAAGTACTGAATTGGGACTCAAATACCATAATAAGATTGCAACTATGGGATATAGCAGGACAAGAGCGCTTCGGGAACATGACGCGTGTTTATTACAAGGAAGCAGTGGGCGCGTTTATAGTGTTCGACGTTTCCAGAGTGGCCACGTTCGACGCTGTCGTCAAGTGGAAGAATGACTTGGATGCGAAAGTTCAGTTGCCCGATGGATCGGCCATACCTTGTATACTGCTCGCTAATAAGTGCGATCAACAGAAGGAAGGTATAGTCAATAGTCCCGCCAAAATGGACGAGTACTGTCGCGAGAAAGGTTTCGCGGGCTGGTTCGAGACATCCGCCAAAGAGAACATCAATATTGAGGAGGCAGCTCGGTCATTAGTTAATAAGATTCTATTAAACGACAAGCTTCTTCAGAACAACGACACCAGGGACGGTGATAAATTCGTGATTGATCACAAAATAGCTAACGGTGACAGCAGAGATGGCGCGAACAAGGCTTGCGGTTGCTGA

Protein

MSPKQKQHAGSSHASASAERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLANKCDQQKEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKILLNDKLLQNNDTRDGDKFVIDHKIANGDSRDGANKACGC

Uniprot

H9IZM6   Q2F5W5   F2VY73   A0A2A4JDA7   A0A2A4JCX7   A0A2A4JDB5   + More
A0A194PEJ3   A0A194R0Q2   A0A212EPC9   A0A088AJT1   A0A0C9R9Y5   A0A0C9RW95   A0A067RKP3   E0VCG5   A0A182U6P0   Q7QJT8   A0A182S9B0   F4WDG0   A0A2A3EER7   A0A0M9A049   A0A182XZG9   A0A2J7Q8U2   E2A9Q7   A0A182JYQ1   A0A2J7Q8U7   A0A0L7QTZ9   E2BRQ4   A0A1B6FZT9   B0WZR8   A0A1Q3F6J3   A0A1B6GKK6   A0A1Q3F6U4   A0A3L8DKT4   A0A1B6IK06   A0A1Q3F6I0   A0A2M4BYC1   A0A1B6H7K9   A0A1B6LC41   T1E7S6   A0A195FRW0   A0A2J7Q8V1   B4QGT7   B4HSP2   A0A2M4BZF2   A0A1B6MK13   A1Z7S2   A0A151J7K8   A0A158NIR4   Q8IH37   A0A0J9R8X9   A1Z7S1   A0A0Q5WKM2   A1Z7S3   A0A0B4LEY0   Q7KY07   A0A023EK20   A0A0J9R8T1   A0A0J9TX72   T1E268   A0A1B6BYD4   A0A026WLZ2   A0A151X0T5   W8CBL4   A0A0R1DTY3   A0A0Q5WNC0   A0A1Y1KVJ8   A0A0J9R9W6   Q8T0G8   B3N7J6   Q86PD0   U5ERJ9   B4P3Z0   J9HYU4   Q174H5   A0A154PKM5   A0A1B6CA05   A0A0Q9XJX9   A0A0A1XRI0   A0A195C9U3   A0A1W4UY09   A0A3B0JJQ9   W8BKL3   A0A0B4UBW9   A0A1W4X2P4   B3MD31   N6W6G8   A0A0Q9XFQ4   A0A034VF73   A0A182R0W5   B4NNM5   A0A182X6G6   A0A182I3R9   A0A182VMA7   A0A1I8NYK8   V4B577   A0A1W4WT24   A0A2T7PEC0   T1PIC5   B4ME48   A0A182P9W2  

Pubmed

19121390    26354079    22118469    24845553    20566863    12364791    + More
14747013    17210077    21719571    25244985    20798317    30249741    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    21347285    22936249    26109357    26109356    24945155    24330624    24508170    24495485    17550304    28004739    17510324    25830018    25542378    18057021    15632085    25348373    23254933   

EMBL

BABH01014484    DQ311308    ABD36252.1    HM037181    ADM07446.1    NWSH01002019    + More
PCG69402.1    PCG69404.1    PCG69403.1    KQ459606    KPI91776.1    KQ461103    KPJ09421.1    AGBW02013516    OWR43311.1    GBYB01013219    JAG82986.1    GBYB01013220    JAG82987.1    KK852458    KDR23583.1    DS235053    EEB11071.1    AAAB01008807    EAA04140.2    GL888087    EGI67740.1    KZ288266    PBC30227.1    KQ435803    KOX73109.1    NEVH01016946    PNF25008.1    GL437918    EFN69859.1    PNF25009.1    KQ414736    KOC62137.1    GL449978    EFN81648.1    GECZ01014061    GECZ01002327    JAS55708.1    JAS67442.1    DS232215    EDS37743.1    GFDL01011869    JAV23176.1    GECZ01006936    GECZ01005220    JAS62833.1    JAS64549.1    GFDL01011765    JAV23280.1    QOIP01000007    RLU21054.1    GECU01020457    JAS87249.1    GFDL01011870    JAV23175.1    GGFJ01008944    MBW58085.1    GECU01037020    JAS70686.1    GEBQ01018747    JAT21230.1    GAMD01002792    JAA98798.1    KQ981285    KYN43183.1    PNF25010.1    CM000362    EDX06312.1    CH480816    EDW47069.1    GGFJ01009314    MBW58455.1    GEBQ01003701    JAT36276.1    AE013599    AAG22295.3    KQ979695    KYN19711.1    ADTU01017084    BT001448    AAN71203.1    CM002911    KMY92476.1    BT083449    AAM68816.2    ACR10181.1    CH954177    KQS70798.1    AAF58970.1    AHN56035.1    AHN56036.1    AB035646    BAA88238.1    GAPW01004125    JAC09473.1    KMY92477.1    KMY92475.1    GALA01001495    JAA93357.1    GEDC01031015    JAS06283.1    KK107152    EZA57077.1    KQ982603    KYQ53959.1    GAMC01004686    JAC01870.1    CM000157    KRJ98467.1    KQS70799.1    GEZM01072774    JAV65402.1    KMY92474.1    AY069328    AAL39473.1    AAM68817.1    AAM68818.1    EDV59401.2    BT003196    AAO24951.1    GANO01002771    JAB57100.1    EDW89473.2    CH477410    EJY57660.1    EAT41483.1    EAT41485.1    KQ434948    KZC12419.1    GEDC01026980    JAS10318.1    CH933808    KRG03987.1    GBXI01015873    GBXI01012123    GBXI01009175    GBXI01007891    GBXI01000710    JAC98418.1    JAD02169.1    JAD05117.1    JAD06401.1    JAD13582.1    KQ978068    KYM97587.1    OUUW01000001    SPP75610.1    GAMC01004685    JAC01871.1    KP216765    AJC97122.1    CH902619    EDV36346.2    KPU76161.1    KPU76162.1    KPU76163.1    CM000071    ENO01823.1    KRG03988.1    GAKP01018503    GAKP01018502    GAKP01018501    JAC40450.1    AXCN02000591    CH964282    EDW85964.2    APCN01000218    KB200149    ESP02671.1    PZQS01000004    PVD31765.1    KA647885    AFP62514.1    CH940662    EDW58813.2   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000005203    + More
UP000027135    UP000009046    UP000075902    UP000007062    UP000075901    UP000007755    UP000242457    UP000053105    UP000076408    UP000235965    UP000000311    UP000075881    UP000053825    UP000008237    UP000002320    UP000279307    UP000078541    UP000000304    UP000001292    UP000000803    UP000078492    UP000005205    UP000008711    UP000053097    UP000075809    UP000002282    UP000008820    UP000076502    UP000009192    UP000078542    UP000192221    UP000268350    UP000192223    UP000007801    UP000001819    UP000075886    UP000007798    UP000076407    UP000075840    UP000075903    UP000095300    UP000030746    UP000245119    UP000008792    UP000075885   

PRIDE

H9IZM6    Q2F5W5    A1Z7S2    Q8IH37    A1Z7S3    Q7KY07    + More
Q86PD0   

Pfam

PF00071   Ras

Interpro

IPR005225   Small_GTP-bd_dom        + More
IPR001806   Small_GTPase       
IPR030697   Rab29/Rab38/Rab32       
IPR027417   P-loop_NTPase       

SUPFAM

SSF52540   SSF52540       

CDD

cd04107  Rab32_Rab38

ProteinModelPortal

H9IZM6   Q2F5W5   F2VY73   A0A2A4JDA7   A0A2A4JCX7   A0A2A4JDB5   + More
A0A194PEJ3   A0A194R0Q2   A0A212EPC9   A0A088AJT1   A0A0C9R9Y5   A0A0C9RW95   A0A067RKP3   E0VCG5   A0A182U6P0   Q7QJT8   A0A182S9B0   F4WDG0   A0A2A3EER7   A0A0M9A049   A0A182XZG9   A0A2J7Q8U2   E2A9Q7   A0A182JYQ1   A0A2J7Q8U7   A0A0L7QTZ9   E2BRQ4   A0A1B6FZT9   B0WZR8   A0A1Q3F6J3   A0A1B6GKK6   A0A1Q3F6U4   A0A3L8DKT4   A0A1B6IK06   A0A1Q3F6I0   A0A2M4BYC1   A0A1B6H7K9   A0A1B6LC41   T1E7S6   A0A195FRW0   A0A2J7Q8V1   B4QGT7   B4HSP2   A0A2M4BZF2   A0A1B6MK13   A1Z7S2   A0A151J7K8   A0A158NIR4   Q8IH37   A0A0J9R8X9   A1Z7S1   A0A0Q5WKM2   A1Z7S3   A0A0B4LEY0   Q7KY07   A0A023EK20   A0A0J9R8T1   A0A0J9TX72   T1E268   A0A1B6BYD4   A0A026WLZ2   A0A151X0T5   W8CBL4   A0A0R1DTY3   A0A0Q5WNC0   A0A1Y1KVJ8   A0A0J9R9W6   Q8T0G8   B3N7J6   Q86PD0   U5ERJ9   B4P3Z0   J9HYU4   Q174H5   A0A154PKM5   A0A1B6CA05   A0A0Q9XJX9   A0A0A1XRI0   A0A195C9U3   A0A1W4UY09   A0A3B0JJQ9   W8BKL3   A0A0B4UBW9   A0A1W4X2P4   B3MD31   N6W6G8   A0A0Q9XFQ4   A0A034VF73   A0A182R0W5   B4NNM5   A0A182X6G6   A0A182I3R9   A0A182VMA7   A0A1I8NYK8   V4B577   A0A1W4WT24   A0A2T7PEC0   T1PIC5   B4ME48   A0A182P9W2  

PDB

4CZ2     E-value=1.45218e-82,     Score=777

KEGG

692903    K07918 Ras-related protein Rab-32 | (RefSeq) Rab-related protein

GO

GO:0003924   GO:0016192   GO:0005802   GO:0031982   GO:0005525   GO:0032482   GO:0005739   GO:0042470   GO:0006886   GO:0016021   GO:0006727   GO:0005776   GO:0010506   GO:0048072   GO:0010883   GO:0005764   GO:0008057   GO:0055037   GO:0006856   GO:0045202   GO:1901214   GO:0007264   GO:0016020   GO:0003995   GO:0003997   GO:0005777   GO:0006631   GO:0006635   GO:0006281   GO:0048384   GO:0005794  

Length:

231

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.10526

Exp number, first 60 AAs:

0.01167

Total prob of N-in:

0.12617

outside

1  -  231

 

 

Pi

210.258562

Theta

171.521093

Tajima's D

0.747681

CLR

0.022104

CSRT

0.587020648967552

Interpretation

Uncertain