Gene

KWMTBOMO02493

Pre Gene Modal

BGIBMGA002581

Annotation

PREDICTED:_protein_scarlet-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr5(+):3427632-3443895      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.492

CDS

ATGTTCCAGCTTCTAAACGACCCGCCCATTCTCTTCTGCGATGAGCCAACAACGGGGCTGGACAGTTGGGCTGCGAGCGCCGTGGTGTCCAGGTTAAGGAAGCTGGCGATCGGTGGCAAACTAGTCATATGCTCAGTCCACCAGCCGGCGTCAGGAGTGTTCGAGATGTTCCACCAGATTGTGTTTTTGGCGAACGGCCGAACCGCCTTCCATGGAACCATTGCACAAGCGGACCAGTTCTTTGGATCGTTAAACTACAAGTGTCCGCTTGGTTTCAACGCTGCCGAATACTATGTATCCCTACTAGGAATCCAGATCGGTAAAGAGTCAGAGAGCCGAGAGAGAATTAGGCGGATCTGCGACGAATATCACCGGTCGGACATCGCTGCCGAGATTGAGGCTAGAGTTGGAGAAGTACATGATGAAGTCGATTACTTTAATGGAACTCTTGATGAGAAGAACGAATATTTCGAGAAATATCTCACCCTAGTCAAAGTTAACTATTTCGTCCAATTCTATTGGTTGATGTGGAGAAACATTCAGCAGATGAAACACAATAGTACAATATGGATCGCAGAATTTTTATTGCTCATGTTTGTCGGCTTCATAATTTCCTTCCCCTACATCGGACACTTCAAAGAGCTTGACCAACGTGACATTCAGAACGTGGAAGGTTTGCTGTACCTAACCATCACAGAGACGATATTCTTGTTCATCTACGCCGTTTTCATCACTTTCCCCAGTGAGGTTCCCATACTACTGAGAGAGACTGCCAGTGGATTGTATTCACCGCTGCCATACTACTTATCGAAGATGATATTTTGGATACCTCGCGCTGTTATTGAGCCCGTTCTGTTCGGTTCCCTCATATTTATTGTGGCGGAGCTTCGTGGCGGTTTCGTCGGCTGGCTAGGATTCTGTTTCGTCTGTGTTCTTTGTGCTAACTACGCCAATGCATACGGTTCATTCCTATCAGCCACCTTCGACAGCCTGGAAACTGCCGCTTTAATATCTGTGCCTCATGAGCTCATAGGCATTATGTTTTCCGGCATCTATCTCAACCTGGGAAGCGCTTCCCCTTACTTCTCCTGGCTCAGATACATATCCGGATTTTACTATGGAACCGAATCAATCTCTATACTACAGTGGAATACTATTTCTACGATCAATTGCGTCAATATCCCGGGAATGCCATGCATAAGAACCGGCCCCGAAGTCTTATCTCGGTTCGGATACGACGAAAGCCATTTCTGGAGGAACTGCGCATGCTTGATTTCTTTATACTGTCTAGGGAATTTGGTGGCTTTTTTTATGGTGGTCCGAAGGAGTAAAGGAACGCCTGTTTATTAA

Protein

MFQLLNDPPILFCDEPTTGLDSWAASAVVSRLRKLAIGGKLVICSVHQPASGVFEMFHQIVFLANGRTAFHGTIAQADQFFGSLNYKCPLGFNAAEYYVSLLGIQIGKESESRERIRRICDEYHRSDIAAEIEARVGEVHDEVDYFNGTLDEKNEYFEKYLTLVKVNYFVQFYWLMWRNIQQMKHNSTIWIAEFLLLMFVGFIISFPYIGHFKELDQRDIQNVEGLLYLTITETIFLFIYAVFITFPSEVPILLRETASGLYSPLPYYLSKMIFWIPRAVIEPVLFGSLIFIVAELRGGFVGWLGFCFVCVLCANYANAYGSFLSATFDSLETAALISVPHELIGIMFSGIYLNLGSASPYFSWLRYISGFYYGTESISILQWNTISTINCVNIPGMPCIRTGPEVLSRFGYDESHFWRNCACLISLYCLGNLVAFFMVVRRSKGTPVY

Uniprot

S6BKX3   S6BR80   A0A1C8V606   A0A1C8V604   A0A1C8V610   A0A1C8V608   + More
A0A212F822   A0A194PGE3   A0A194QV63   A0A2A4JDG4   H9IZ96   A0A0L7KSB8   A0A2H1X0W7   A0A088AJS3   A0A1B6M3P2   A0A1B6G8L1   A0A154PMA4   A0A0L7QU96   A0A0C9RQR3   A0A2R7W485   A0A0A9Y4T5   A0A0K8SXT9   A0A146LTS6   A0A2R7W415   A0A0K8T554   A0A0A9Y0I9   T1HYU4   A0A1B6K9B6   A0A067RUR8   A0A023EZE5   A0A1B6DHK4   A0A1B6JZ64   A0A1B6I041   A0A1B6HG91   A0A1B6GRU4   A0A0A9YCE5   A0A1B6FJA2   A0A1B6IVR3   A0A2Z5ZBK5   A0A2H1VY39   A0A0P5DXX9   A0A0P5EDN6   A0A2J7R206   A0A1C8V5Z9   A0A1B6DEE7   A0A2Z6DUK0   A0A288W7L2   A0A0P6JRY7   A0A1D2NLM5   A0A164K8J4   E9G786   A0A1W4WFG8   A0A0A9VRM9   A0A0K8T4T1   A0A1W4WFR4   A0A1W4W3X7   A0A0P4XA18   A0A2P2I4T6   A0A194Q9K4   A0A146KYL8   A0A1W4WEG5   A0A2S2Q7P3   A0A195FX41   A0A151XFE2   A0A067RB62   A0A212F0I6   F1SZW3   A0A158NHH1   A0A195D4H3   M1G4Y3   A0A182FMA6   M1G5M9   A0A1B6DWZ9   J9HTX2   A0A226EGU4   A0A084VJE8   A0A0K0LSP5   B0WJT2   A0A182SB01   A0A1S4G5D4   A0A026WEA3   E9IZQ1   A0A0P5D844   J9JZD3   W5JKY4   A0A2A3EL46   A0A182QPW2   A0A087ZW43   A0A0P5MY89   A0A0C9Q8V2   A0A182JB74   A0A2Z5TXK4   B4J0W2   A0A3Q0IQI1   E0VCR4   A0A1D2MZ56   A0A182R9H5   A0A182LY19   A0A182MZI6  

Pubmed

28053351    22118469    26354079    19121390    26227816    25401762    + More
26823975    24845553    25474469    27289101    21292972    21347285    17510324    24438588    25555987    24508170    21282665    20920257    23761445    17994087    20566863   

EMBL

AB780442    BAN66699.1    AB780440    BAN66697.1    KU754485    ANW09747.1    + More
KU754481    ANW09743.1    KU754486    ANW09748.1    KU754482    ANW09744.1    AGBW02009802    OWR49892.1    KQ459606    KPI91774.1    KQ461103    KPJ09423.1    NWSH01001881    PCG69816.1    BABH01014489    JTDY01006488    KOB65971.1    ODYU01012557    SOQ58951.1    GEBQ01009425    JAT30552.1    GECZ01010984    JAS58785.1    KQ434948    KZC12418.1    KQ414736    KOC62134.1    GBYB01010845    JAG80612.1    KK854302    PTY14389.1    GBHO01016420    JAG27184.1    GBRD01008091    GDHC01011007    JAG57730.1    JAQ07622.1    GDHC01007506    JAQ11123.1    KK854197    PTY12955.1    GBRD01005164    GDHC01016572    JAG60657.1    JAQ02057.1    GBHO01020554    GBRD01005165    JAG23050.1    JAG60656.1    ACPB03009781    GEBQ01031928    JAT08049.1    KK852458    KDR23584.1    GBBI01004095    JAC14617.1    GEDC01027124    GEDC01012117    JAS10174.1    JAS25181.1    GECU01020143    GECU01003217    JAS87563.1    JAT04490.1    GECU01034635    GECU01027418    JAS73071.1    JAS80288.1    GECU01034030    JAS73676.1    GECZ01004613    JAS65156.1    GBHO01016419    JAG27185.1    GECZ01019500    JAS50269.1    GECU01016776    JAS90930.1    LC368082    BBC77941.1    ODYU01005100    SOQ45636.1    GDIP01149319    JAJ74083.1    GDIP01147917    JAJ75485.1    NEVH01008201    PNF34870.1    KU754478    ANW09740.1    GEDC01013286    JAS24012.1    LC380914    BBD76029.1    KX880378    ARS88259.1    GDIQ01010910    JAN83827.1    LJIJ01000010    ODN06152.1    LRGB01003372    KZS03048.1    GL732534    EFX84423.1    GBHO01045190    JAF98413.1    GBRD01005303    JAG60518.1    GDIP01246055    JAI77346.1    IACF01003431    LAB69047.1    KQ459472    KPJ00091.1    GDHC01017351    GDHC01005996    JAQ01278.1    JAQ12633.1    GGMS01004531    MBY73734.1    KQ981208    KYN44887.1    KQ982194    KYQ59055.1    KK852575    KDR20988.1    AGBW02011105    OWR47211.1    AB588821    BAK08373.1    ADTU01015823    ADTU01015824    KQ976870    KYN07741.1    JQ687131    AFZ40748.1    JQ687130    AFZ40747.1    GEDC01007108    JAS30190.1    CH478356    EJY58108.1    LNIX01000003    OXA56822.1    ATLV01013553    KE524867    KFB38092.1    KP120763    AJD07060.1    DS231964    EDS29449.1    KK107293    EZA53359.1    GL767232    EFZ13909.1    GDIP01164072    JAJ59330.1    ABLF02038190    ADMH02001140    ETN63958.1    KZ288215    PBC32437.1    AXCN02001274    GDIQ01150117    JAL01609.1    GBYB01010698    JAG80465.1    LC322271    BBB02494.1    CH916366    EDV95783.1    DS235063    EEB11170.1    LJIJ01000366    ODM98292.1    AXCM01002858   

Proteomes

UP000007151    UP000053268    UP000053240    UP000218220    UP000005204    UP000037510    + More
UP000005203    UP000076502    UP000053825    UP000015103    UP000027135    UP000235965    UP000094527    UP000076858    UP000000305    UP000192223    UP000078541    UP000075809    UP000005205    UP000078542    UP000069272    UP000008820    UP000198287    UP000030765    UP000002320    UP000075901    UP000053097    UP000007819    UP000000673    UP000242457    UP000075886    UP000075880    UP000001070    UP000079169    UP000009046    UP000075900    UP000075883    UP000075884   

PRIDE

S6BKX3    S6BR80    H9IZ96    F1SZW3    M1G4Y3    M1G5M9    + More

Pfam

PF01061   ABC2_membrane        + More
PF00005   ABC_tran

Interpro

IPR013525   ABC_2_trans        + More
IPR003593   AAA+_ATPase       
IPR017871   ABC_transporter_CS       
IPR003439   ABC_transporter-like       
IPR027417   P-loop_NTPase       
IPR005284   Pigment_permease/Abcg       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

S6BKX3   S6BR80   A0A1C8V606   A0A1C8V604   A0A1C8V610   A0A1C8V608   + More
A0A212F822   A0A194PGE3   A0A194QV63   A0A2A4JDG4   H9IZ96   A0A0L7KSB8   A0A2H1X0W7   A0A088AJS3   A0A1B6M3P2   A0A1B6G8L1   A0A154PMA4   A0A0L7QU96   A0A0C9RQR3   A0A2R7W485   A0A0A9Y4T5   A0A0K8SXT9   A0A146LTS6   A0A2R7W415   A0A0K8T554   A0A0A9Y0I9   T1HYU4   A0A1B6K9B6   A0A067RUR8   A0A023EZE5   A0A1B6DHK4   A0A1B6JZ64   A0A1B6I041   A0A1B6HG91   A0A1B6GRU4   A0A0A9YCE5   A0A1B6FJA2   A0A1B6IVR3   A0A2Z5ZBK5   A0A2H1VY39   A0A0P5DXX9   A0A0P5EDN6   A0A2J7R206   A0A1C8V5Z9   A0A1B6DEE7   A0A2Z6DUK0   A0A288W7L2   A0A0P6JRY7   A0A1D2NLM5   A0A164K8J4   E9G786   A0A1W4WFG8   A0A0A9VRM9   A0A0K8T4T1   A0A1W4WFR4   A0A1W4W3X7   A0A0P4XA18   A0A2P2I4T6   A0A194Q9K4   A0A146KYL8   A0A1W4WEG5   A0A2S2Q7P3   A0A195FX41   A0A151XFE2   A0A067RB62   A0A212F0I6   F1SZW3   A0A158NHH1   A0A195D4H3   M1G4Y3   A0A182FMA6   M1G5M9   A0A1B6DWZ9   J9HTX2   A0A226EGU4   A0A084VJE8   A0A0K0LSP5   B0WJT2   A0A182SB01   A0A1S4G5D4   A0A026WEA3   E9IZQ1   A0A0P5D844   J9JZD3   W5JKY4   A0A2A3EL46   A0A182QPW2   A0A087ZW43   A0A0P5MY89   A0A0C9Q8V2   A0A182JB74   A0A2Z5TXK4   B4J0W2   A0A3Q0IQI1   E0VCR4   A0A1D2MZ56   A0A182R9H5   A0A182LY19   A0A182MZI6  

PDB

6HIJ     E-value=1.27811e-34,     Score=367

KEGG

101743333    K21396 ATP-binding cassette, subfamily G (WHITE), eye pigment precursor transporter | (RefSeq) Bm-ok

GO

GO:0016887   GO:0016021   GO:0005524   GO:0016020   GO:0055085   GO:0042626   GO:0005886   GO:0005275   GO:0015842   GO:0090740   GO:0006856   GO:0098793   GO:0006727   GO:0015416   GO:0042030   GO:0003995   GO:0003997   GO:0005777   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

Length:

449

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

137.79622

Exp number, first 60 AAs:

0.05888

Total prob of N-in:

0.10155

outside

1  -  189

TMhelix

190  -  212

inside

213  -  224

TMhelix

225  -  247

outside

248  -  271

TMhelix

272  -  294

inside

295  -  300

TMhelix

301  -  323

outside

324  -  342

TMhelix

343  -  365

inside

366  -  416

TMhelix

417  -  439

outside

440  -  449

 

 

Pi

291.576753

Theta

217.644831

Tajima's D

0.211844

CLR

174.838832

CSRT

0.427928603569821

Interpretation

Uncertain