SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02483  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002715
Annotation
PREDICTED:_ice_nucleation_protein-like_[Amyelois_transitella]
Location in the cell
Extracellular   Reliability : 2.893
 

Sequence

CDS
ATGGCAGCAAGATTTGTAGTCGCTGTGGCGCTTGTGGCCTTGTGCCGTGCCAACCCCGTCATTAAAAACGGTGTCGTCTACCGTGACAGTCGGGGTTTAGCCATCGGCCAAGCATACAACAGCGACGGCGGAGTGAGCCAGGCCAACGCCAACGTAATCGGTGGTGTATCACAGGCCTACGGTAGCAGCAGCAACGGTGGTCACATAGCGCGTGACGGGCTCTTCTATCCCGGTCAAGCTATCGCGAAAGCGGAAACCTACGACAACGATGGAAACCTAATCAACGGTCCGTCTCAAGCTATCGCTAAAGCCCAGAATGGAGGTGCTTACTACCCAGTCCCCGCTCCCGGTACCATCATCACTTATGAGCAGAACTTCGCTGTACCTGCTGAAGTCGCCTACGAAATTCCCGCTGGGGCCGTGAAGTCCCATTCAGCTGCCCACTCGGATGGCATTTCTGACTCGTCGCTTTCCACTGCTTCCACCAACGGTGCGGGAAATGCTCAGTCTTCCGCTCAGACTCAAGGCATCAGCGGTTTTGGAACCACCTCCACCAACGCTAAAACTTATGGGAACAGCTTCGGTTCCGCCGCCTCCAACGCCAAAAATGGCTACGGCTCTGCTGTAACTTCGGCCAAAACAAATGGATTTGGTGCCGCAACCTCCAACGCTCAAACAAACGGAGTGACTGGAATCATTGCGCCTGTCGCGCCTATCAATGACCTCGAATCGACTGTCATCTCTGCCAAAACTCAAGGAATTTACACCGGATACACAAACCCCAACATTGGATCAGCTTCTTCCAACGCCAACGTTAATGGTCACGGAAGCGCTTCTTCCTATGCCAGAACTCATGACCAGAGAGGTATCCACTGGCGCTTCGGAACTCTGTACGACAATCCCGCCAGTGCAGCTTACAACAGCCATCCCGGTTATGGTGCCATCAAGTACACCGCCACTAACCCTGGCTATGGATCTGCTAACGCCAACGCCAACGTGAACGGTGCCGGCTACGGCTCAGCCAACTCTGCTGCCAACACCAATGGCTACGGTACAGCCAAGTCCTCCGCCAACTCTAACGGAGCCGGTTACGGAACTGCCAACGCCAATGCTGATGTGAACAACGCCGGCTATTACAGCTTTAGGAATACCGCCAACCCCAGCTACCCCGGCTACGGTTCCGCCATCTCTTCAGCCAACACTGGTGGCTATGGAACTGCCAAATCGTCCGCGAACACCCAAGGCTCCAGCTTCGGGGGAAGAACCGCTACCGACGCTCACACTGCAGGCTTTGGCTCTGCTAGATCCTCCGCTAAAACTCATGGTGTGAGCACCGCGTTCAAGGTGGCCGACTCTTCCGCCAACAGCTACGGTCACGGTTCCGCTAATGCTAAGGCCACAAGTGCTTAA
Protein
MAARFVVAVALVALCRANPVIKNGVVYRDSRGLAIGQAYNSDGGVSQANANVIGGVSQAYGSSSNGGHIARDGLFYPGQAIAKAETYDNDGNLINGPSQAIAKAQNGGAYYPVPAPGTIITYEQNFAVPAEVAYEIPAGAVKSHSAAHSDGISDSSLSTASTNGAGNAQSSAQTQGISGFGTTSTNAKTYGNSFGSAASNAKNGYGSAVTSAKTNGFGAATSNAQTNGVTGIIAPVAPINDLESTVISAKTQGIYTGYTNPNIGSASSNANVNGHGSASSYARTHDQRGIHWRFGTLYDNPASAAYNSHPGYGAIKYTATNPGYGSANANANVNGAGYGSANSAANTNGYGTAKSSANSNGAGYGTANANADVNNAGYYSFRNTANPSYPGYGSAISSANTGGYGTAKSSANTQGSSFGGRTATDAHTAGFGSARSSAKTHGVSTAFKVADSSANSYGHGSANAKATSA

Summary

Ontologies

GO

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.994593
 
 
Length:
469
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.02101
Exp number, first 60 AAs:
1.01896
Total prob of N-in:
0.04844
outside
1  -  469
 
 

Population Genetic Test Statistics

Pi
150.602806
Theta
189.020865
Tajima's D
-0.451371
CLR
0.422658
CSRT
0.248887555622219
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
24093152 NTAEPYPVR 100.00 7e-10
24093152 VADISVIK 100.00 6e-04
24093152 TAQWISK 100.00 0.018
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