Gene

KWMTBOMO02477  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002572

Annotation

ribosomal_protein_L19_[Bombyx_mori]

Location

Bomo_Chr5(+):2951013-2954098      View in EpiBrowser

Full name

Ribosomal protein L19      

Location in the cell

Nuclear   Reliability : 3.342

CDS

ATGAGTTCCCTCAAGCTGCAGAAGAGGCTTGCAGCCTCTGTTATGCGATGTGGTAAAAAGAAGGTGTGGTTGGATCCAAATGAAATCAATGAGATCGCAAACACCAACTCCAGACAGAACATCCGTAAGATGATCAAGGATGGTCTCGTCATCAAGAAACCTGTAGCAGTCCACTCCCGCGCCCGTGTCCGCAAAAACACAGAGGCACGTAGAAAGGGTCGTCACTGTGGCTTTGGTAAGAGAAGAGGTACTGCCAATGCGCGTATGCCACAGAAGGAACTATGGGTACAAAGACAAAGGGTTCTAAGAAAATTGCTCCTGAAGTACAGAACTGCCAAGAAGATTGACAGGCATCTATACCACTCACTCTACATGAAGGCGAAGGGTAATGTGTTCAAGAACAAGCGTGTGCTCATGGAGTACATCCACAGGAAGAAGGCTGAGAAGGCCAGGACGAAGATGCTTAGCGACCAGGCTGAGGCCCGCCGCAATAAAGTAAAGGAGGCACGCAAGCGCCGCGAGGAACGTATTGCCGCCAAGAAGGAGGAACTGCTGCAGACCTTCGCTAGAGAAGACGAAGCCGCGCTTACCGCTAAGAAGTAA

Protein

MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQRVLRKLLLKYRTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREERIAAKKEELLQTFAREDEAALTAKK

Similarity

Belongs to the eukaryotic ribosomal protein eL19 family.

Feature

chain  Ribosomal protein L19

Uniprot

Q5UAR9   E3UPD6   G0ZEG0   S4NN04   A0A2W1BLA0   A0A2A4IZU1   + More
D1LYM9   I4DM29   I4DII0   A0A3G1T1I9   E7DZ42   A0A1E1W300   H9IZ87   A0A2H1VY06   A0A222AJ37   A0A194QVU0   Q4GXG0   Q4GXF8   A0A1W4X8B4   A0A212EZL1   A0A1Y1LYF0   A0A194Q3Y3   E2BCG5   K7J558   A0A0C9RMS0   X2JFT9   V9IFY2   A0A0X7YDR7   R4WN98   A0A026WD95   X2JK46   A0A023FB14   R4G4J0   D3KCZ8   A0A158NJM1   R4V3K4   A0A2A3EG73   A0A1Y1LX97   A0A151IIN1   E9ILH8   A0A195FM80   A0A1Y1K0X8   A0A2J7PF45   A0A0J7KCJ6   A0A1B6FHR7   Q1W293   A0A2P8XZA0   A0A0K8T6X5   Q4GXF7   A0A0A9XS80   A0A067RS31   D6WLJ5   A0A161MKV6   Q0PXY9   A0A146LQB3   Q56FI2   E9HJW4   D1M821   T1E7H8   A0A2M3YX90   A0A2M3ZYT3   W5JQ52   A0A182FFX2   D3TQA9   A0A1A9YD53   A0A1A9ZE35   A0A182QT94   D6W6N0   A0A182NCW0   A0A182MQW1   A0A182RI15   A0A182Y8Z7   A0A182JP29   A0A182PLI2   A0A182IYK5   A0A0P5E5M0   A0A1B0BQW2   J3JW76   A0A0K8TPU1   B6DDS2   A0A1Q3FAW7   B0X5E2   A0A336M885   A0A0P5MSS8   A0A0L0CBQ5   A0A182V926   A0A182KZR3   A0A182U6D9   A0A182XF78   Q7PQA3   A0A182HVP9   A0A1B6JRV0   A0A336M2R2   A0A2A4AR10   Q1HR74   A0A023ELI8   A0A182W394   A0A1W4V0V7   B4LL16   B4KQS7  

Pubmed

23622113    28756777    22651552    19121390    26354079    22118469    + More
28004739    20798317    20075255    23691247    24508170    30249741    25474469    21347285    21282665    29403074    26823975    25401762    24845553    18362917    19820115    21292972    20920257    23761445    20353571    25244985    22516182    23537049    26369729    19178717    26108605    20966253    12364791    14747013    17210077    17204158    24945155    26483478    17994087   

EMBL

AY769289    DQ443429    AAV34831.1    ABF51518.1    HM536620    ADO95159.1    + More
JF265038    AEL28869.1    GAIX01014151    JAA78409.1    KZ150070    PZC74067.1    NWSH01004519    PCG65016.1    GU084303    ACY95336.1    AK402347    BAM18969.1    AK401098    BAM17720.1    MG992412    AXY94850.1    HQ424745    ADT80689.1    GDQN01009698    JAT81356.1    BABH01014528    ODYU01005146    SOQ45720.1    KY563963    ASO76379.1    KQ461103    KPJ09434.1    AM049063    CAJ17302.1    AM049065    CAJ17304.1    AGBW02011282    OWR46897.1    GEZM01047887    JAV76706.1    KQ459465    KPJ00252.1    GL447274    EFN86617.1    AAZX01005718    GBYB01008301    JAG78068.1    KJ028108    AHN65140.1    JR045464    AEY59985.1    KC507343    AHB12466.1    AK417081    BAN20296.1    KK107260    QOIP01000001    EZA54050.1    RLU26307.1    KJ028107    AHN65139.1    GBBI01000498    JAC18214.1    GAHY01000731    JAA76779.1    GU471220    ADC34226.1    ADTU01018058    ADTU01018059    KC571874    AGM32373.1    KZ288266    PBC30219.1    GEZM01047888    JAV76705.1    KQ977475    KYN02504.1    GL764076    EFZ18575.1    KQ981424    KYN41805.1    GEZM01097768    JAV54118.1    NEVH01026085    PNF14960.1    LBMM01009484    KMQ88108.1    GECZ01026693    GECZ01020276    JAS43076.1    JAS49493.1    DQ445534    GEBQ01016892    ABD98772.1    JAT23085.1    PYGN01001129    PSN37342.1    GBRD01004906    GDHC01002366    JAG60915.1    JAQ16263.1    AM049066    CAJ17305.1    GBHO01021946    JAG21658.1    KK852458    KDR23590.1    KQ971343    EFA04120.1    GEMB01000157    JAS02956.1    DQ673397    ABG81970.1    GDHC01008588    JAQ10041.1    AY961518    AAX62420.1    GL732665    EFX67939.1    GU120445    ACY71295.1    GAMD01003037    JAA98553.1    GGFM01000124    MBW20875.1    GGFK01000311    MBW33632.1    ADMH02000483    GGFL01004431    ETN66266.1    MBW68609.1    EZ423611    ADD19887.1    AXCN02001559    KQ971307    EFA10969.1    AXCM01004942    GDIP01164750    LRGB01000005    JAJ58652.1    KZS22088.1    JXJN01018834    APGK01021409    APGK01021410    APGK01032926    BT127494    KB740857    KB740321    KB631671    KB631745    AEE62456.1    ENN78610.1    ENN80874.1    ERL85259.1    ERL85733.1    GDAI01001209    JAI16394.1    EU934282    ACI30060.1    GFDL01010376    JAV24669.1    DS232375    EDS40827.1    UFQT01000595    SSX25571.1    GDIQ01163236    JAK88489.1    JRES01000644    KNC29675.1    AAAB01008898    EAA09119.6    APCN01005809    GECU01005785    JAT01922.1    UFQS01000374    UFQT01000374    SSX03315.1    SSX23681.1    NWMT01000230    PCC98068.1    DQ440220    ABF18253.1    JXUM01020523    GAPW01004484    KQ560574    JAC09114.1    KXJ81848.1    CH940648    EDW61823.1    CH933808    EDW09276.1   

Proteomes

UP000218220    UP000005204    UP000053240    UP000192223    UP000007151    UP000053268    + More
UP000008237    UP000002358    UP000005203    UP000053097    UP000279307    UP000005205    UP000242457    UP000078542    UP000078541    UP000235965    UP000036403    UP000245037    UP000027135    UP000007266    UP000079169    UP000000305    UP000000673    UP000069272    UP000092443    UP000092445    UP000075886    UP000075884    UP000075883    UP000075900    UP000076408    UP000075881    UP000075885    UP000075880    UP000076858    UP000092460    UP000019118    UP000030742    UP000002320    UP000037069    UP000075903    UP000075882    UP000075902    UP000076407    UP000007062    UP000075840    UP000243750    UP000069940    UP000249989    UP000075920    UP000192221    UP000008792    UP000009192   

PRIDE

Q5UAR9    H9IZ87   

Pfam

PF01280   Ribosomal_L19e

Interpro

IPR033935   Ribosomal_L19_euka        + More
IPR039547   RPL19       
IPR000196   Ribosomal_L19/L19e       
IPR035970   60S_ribosomal_L19/L19e_sf       
IPR023638   Ribosomal_L19/L19e_CS       
IPR015972   Ribosomal_L19/L19e_dom1       

SUPFAM

SSF48140   SSF48140       

Gene 3D

1.10.1650.10    

CDD

cd01417  Ribosomal_L19e_E

ProteinModelPortal

Q5UAR9   E3UPD6   G0ZEG0   S4NN04   A0A2W1BLA0   A0A2A4IZU1   + More
D1LYM9   I4DM29   I4DII0   A0A3G1T1I9   E7DZ42   A0A1E1W300   H9IZ87   A0A2H1VY06   A0A222AJ37   A0A194QVU0   Q4GXG0   Q4GXF8   A0A1W4X8B4   A0A212EZL1   A0A1Y1LYF0   A0A194Q3Y3   E2BCG5   K7J558   A0A0C9RMS0   X2JFT9   V9IFY2   A0A0X7YDR7   R4WN98   A0A026WD95   X2JK46   A0A023FB14   R4G4J0   D3KCZ8   A0A158NJM1   R4V3K4   A0A2A3EG73   A0A1Y1LX97   A0A151IIN1   E9ILH8   A0A195FM80   A0A1Y1K0X8   A0A2J7PF45   A0A0J7KCJ6   A0A1B6FHR7   Q1W293   A0A2P8XZA0   A0A0K8T6X5   Q4GXF7   A0A0A9XS80   A0A067RS31   D6WLJ5   A0A161MKV6   Q0PXY9   A0A146LQB3   Q56FI2   E9HJW4   D1M821   T1E7H8   A0A2M3YX90   A0A2M3ZYT3   W5JQ52   A0A182FFX2   D3TQA9   A0A1A9YD53   A0A1A9ZE35   A0A182QT94   D6W6N0   A0A182NCW0   A0A182MQW1   A0A182RI15   A0A182Y8Z7   A0A182JP29   A0A182PLI2   A0A182IYK5   A0A0P5E5M0   A0A1B0BQW2   J3JW76   A0A0K8TPU1   B6DDS2   A0A1Q3FAW7   B0X5E2   A0A336M885   A0A0P5MSS8   A0A0L0CBQ5   A0A182V926   A0A182KZR3   A0A182U6D9   A0A182XF78   Q7PQA3   A0A182HVP9   A0A1B6JRV0   A0A336M2R2   A0A2A4AR10   Q1HR74   A0A023ELI8   A0A182W394   A0A1W4V0V7   B4LL16   B4KQS7  

PDB

4V6W     E-value=2.0839e-53,     Score=525

KEGG

692696    K02885 large subunit ribosomal protein L19e | (RefSeq) RpL19; ribosomal protein L19

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0003723   GO:0022625   GO:0006412   GO:0003735   GO:0005840   GO:0005622   GO:0008152   GO:0016301   GO:0016773   GO:0006281   GO:0048384  

PANTHER

PTHR10722  

Length:

200

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.09922

outside

1  -  200

 

 

Pi

146.291976

Theta

156.42016

Tajima's D

-0.203588

CLR

137.760607

CSRT

0.317434128293585

Interpretation

Uncertain