Silkworm Genome Informatics Database

Gene

KWMTBOMO02469

Pre Gene Modal

BGIBMGA002720

Annotation

hypothetical_protein_RR46_02648_[Papilio_xuthus]

Location

Bomo_Chr5(-):2878973-2879552 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.331 PlasmaMembrane Reliability : 1.779

CDS

ATGATGAAACTAGTGATTTACTTGTCTTTAATTGTCCTTGTTTTAAATCATACTGCAGGATGCGACGCTTTGCGTAGCTCAAATCGAGGAAATAGTAAATACGGTAGTGGGAACCAGGGTCTAGGGAAGGCTAAACCGTACGGAGGCACTTCCCCGGGTATACCTTCACAGAGCACCACAAGGCGTGGTGTGGGAATATCTGCATGGGGAATTGTGTTCTTAGTCGTGGCACTGGTAGTGGCAGGAATGGGTTTCTATTATTTCTCAATGTGCTACCCTTATTTTTGTCACAGACAAGAAAAATACCATATTATGGGAACCCCTACCATGGCATGA

Protein

MMKLVIYLSLIVLVLNHTAGCDALRSSNRGNSKYGSGNQGLGKAKPYGGTSPGIPSQSTTRRGVGISAWGIVFLVVALVVAGMGFYYFSMCYPYFCHRQEKYHIMGTPTMA

Uniprot

H9IZN5 A0A2A4IYV7 A0A2W1BUZ7 A0A194Q5H5 A0A194R0S0 A0A2H1WUQ9 + More
S4NSR7 A0A0L7KZE4 A0A1B6KAI6 A0A195EA88 B0X0X5 T1I372 A0A1B6EZV6 A0A1B6MF99 A0A2S2N8F2 A0A1B6GLX4

Pubmed

19121390 28756777 26354079 23622113 26227816

EMBL

BABH01014536 NWSH01004519 PCG65005.1 KZ149951 PZC76600.1 KQ459465 + More
KPJ00260.1 KQ461103 KPJ09441.1 ODYU01011208 SOQ56798.1 GAIX01013947 JAA78613.1 JTDY01004081 KOB68628.1 GEBQ01031518 JAT08459.1 KQ979236 KYN22135.1 DS232248 EDS38367.1 ACPB03014798 GECZ01026262 GECZ01023623 GECZ01011144 JAS43507.1 JAS46146.1 JAS58625.1 GEBQ01005391 JAT34586.1 GGMR01000872 MBY13491.1 GECZ01006341 JAS63428.1

Proteomes

UP000005204 UP000218220 UP000053268 UP000053240 UP000037510 UP000078492 + More
UP000002320 UP000015103

PRIDE

H9IZN5

ProteinModelPortal

H9IZN5 A0A2A4IYV7 A0A2W1BUZ7 A0A194Q5H5 A0A194R0S0 A0A2H1WUQ9 + More
S4NSR7 A0A0L7KZE4 A0A1B6KAI6 A0A195EA88 B0X0X5 T1I372 A0A1B6EZV6 A0A1B6MF99 A0A2S2N8F2 A0A1B6GLX4

KEGG

101745543 no KO assigned | (RefSeq) uncharacterized LOC101745543

GO

GO:0016021

SignalP

Position: 1 - 21, Likelihood: 0.994858

Length:

111

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

33.83463

Exp number, first 60 AAs:

11.01825

Total prob of N-in:

0.43232

POSSIBLE N-term signal

sequence

inside

1 - 65

TMhelix

66 - 88

outside

89 - 111

Pi

226.95052

Theta

209.836072

Tajima's D

0.256774

CLR

0

CSRT

0.437378131093445

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics