SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02460  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002565
Annotation
PREDICTED:_uncharacterized_protein_LOC106133480_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 1.472
 

Sequence

CDS
ATGAAGGTGATGTACGCTTTCGTGATGATGAGCTGCGCGCTACTGGTGCAAGCGTATCCCTACAATCCCTACTATGGAAACGTGGACTCCCTTTCCTACGGCTCGGGCGATAGTAACCGAGGAGGCTTGGTCATGAGCCGTTACTACAATCCTTACTACAACCCCAGAGCTGTGGGCGGTGGTATGGCCGCGTTCATGTACCGCCAGCCCGAAGCCGCACAGGCGCCTTCAACGGGCCAGGTGTACATACCTGATCGTCGCCGCCAGACCCTTGCCGATACCAGCTACGTACCGCAACAAGAAAACGAAGTCTATTACCCTCAGCAACCAGAGAACCCGATCTTCAGCCCCACTCAAGCGACCGAACTGGCTGACCCCACTGAAAAGATCGAATTGTACTCCACCACTTTGGTACCGGTTGCCAAGGCTACCGAAGCGCCTGCCGCTCCTGAACTACCAGAGCCGGAAGTACTCGAAGTTGAGGAGCCCAAGGCGAAGAAGGCTGTCGCTAATAAGAAGAAACAGGCGAAGAGGCCTCTTGAGGAAGACGAGGAAGAAGATGACTTCGCACCACCCAGAGTGCCCACATCCGCGTTCTTCCCAATGTTCTTCGGATGGGGAGGTAGGGCCGCAGGTGGTCCCGGAGGCCCGACCGCAGTTGCCAACGCATACAGCACAGGTCGAGGAGGCGTCGCCACAAGCCACGCCACCGCCTACGGTGGACCCCGACCGGATGAAAAATTGTAA
Protein
MKVMYAFVMMSCALLVQAYPYNPYYGNVDSLSYGSGDSNRGGLVMSRYYNPYYNPRAVGGGMAAFMYRQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPTQATELADPTEKIELYSTTLVPVAKATEAPAAPELPEPEVLEVEEPKAKKAVANKKKQAKRPLEEDEEEDDFAPPRVPTSAFFPMFFGWGGRAAGGPGGPTAVANAYSTGRGGVATSHATAYGGPRPDEKL

Summary

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.999087
 
 
Length:
248
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.4528
Exp number, first 60 AAs:
0.40575
Total prob of N-in:
0.07354
outside
1  -  248
 
 

Population Genetic Test Statistics

Pi
218.352655
Theta
199.423714
Tajima's D
0.409711
CLR
0.227342
CSRT
0.489825508724564
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 RPLEEDEEEDDFAPPR 100.00 1e-07
28556443 VPTSAFFPMF 100.00 2e-07
26280517 GGMEYGQQWPDRPEMR 100.00 5e-07
25044914 GGTIIQYEDK 100.00 5e-07
28556443 GGVATSHATAYGGPRPDEK 100.00 5e-07
28556443 AAGGPGGPTAVANAYSTGR 100.00 5e-07
28556443 AAGGPGGPTAVANAYSTGR 100.00 5e-07
26280517 QMVPADGGEVSEDIKQMIESHDK 100.00 1e-06
26280517 QNINSVVICIQSIGR 100.00 7e-06
21761556 AVGGGMAAFMYR 100.00 7e-06
28556443 GGVATSHATAYGGPRPDEK 100.00 7e-06
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