SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02456
Pre Gene Modal
BGIBMGA002562
Annotation
PREDICTED:_uncharacterized_protein_LOC101747144_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.727
 

Sequence

CDS
ATGGCGACGACGACGACATTGACAATATTCGCTGTGGTTCTCCTCTCAGCACACTGTGCTGTGCTCGGACAGTATTGGCAAAACGAAGATTCACTTACGCGAGTTGTTCGATCCCCGTGTGATGAATGTGAATATCATAGATTTCATCATCATCCACGTCATTTTAGGTACCTTGGGCCTCCGGGACCACCTCCAATATTCCGCACACAGCAATGGACAGGGGTAGCGCGTGGTTCAGATGGAAGCGCCCAAGGTGTATTCAGTGGAGCAGCTGCTGCTGCCGAGGGCGGTGCTCAAACAGCTGGTCAAGCATTCTCCCTAGCTTCTTCCTCTGTTGGATCAGATGTCGGTGCCGGCTTAGGATCTAAATCTGCAGGTTATGGTGCTAGTGGCAATTCAGGAGCTGCAGTTCAGATGGAGTCGGGGGAAACGGACAGAAAGAAAATGCTGCTAGTTTCAAAGAATCACACTATTCATATCAGAGCAAGCAATTTGGAGGTCGCAAGCAATTTGGGGGTTTTAGCTCTCAATCACAAAGTCAAGAGGGTGGATTCGGTGGTTCGCATGGTCAACAGAACGGATTCAGTGGTTCTCAAGGCCAAGGAAGTGGGTTCAGTGGTTCACAAGGCCAAGATAGTGGATTTAGTAGCTCACAAGGTCAAGGAGGTGGATTTAGTAGCTCACAAAACCAAGGCAGTGGGTACAGTGGATCACAAAGCCAAGGGAGTGGATTCAGTGGTTCACATGGTGAAGGGAATGGGTTCAGTGGCTCACAAAGCCAAGGGAGTGGGTACAGTGGATCACAAGGCCAAGGGAGTGGTTCACGTGGTCAAGGGAGTCAATTCACTGGCTCACAAAACCAAGGTAGTGGGTATAGTAGATCACAAGGCCAAGGAAGTGGTTTCAGTGATTCACGTGGTCAAGGGAGTGGATTCAGTGGCTCACAAAATCAAGGGAGTGGATTTGGTAGCTCTCAAGAGCAGAGTGCTCGCTTTAGTTCTGCAAACTCTCAAGTTAAAAGCTCATACGGGAACAGTGGTGGATCTAGTTTTGGTCACAATGATGGCGGATTTTCTGGTGAAGCTCAACAACAGCAAATTGACGCTGGTTCTCAAAGCGGCGGCTTTTCTCAAGGAGGCGATGGTTCGATCAGTGAACAACATCAATCGCAATCATCGAGCGGTGGACAGTGGCAACAAGGCGGTGGATATGGGTCCAGCTCATATAGAAAGGCGGGATCAGCTTTAA
Protein
MATTTTLTIFAVVLLSAHCAVLGQYWQNEDSLTRVVRSPCDECEYHRFHHHPRHFRYLGPPGPPPIFRTQQWTGVARGSDGSAQGVFSGAAAAAEGGAQTAGQAFSLASSSVGSDVGAGLGSKSAGYGASGNSGAAVQMESGETDRKKMLLVSKNHTIHIRASNLEVASNLGVLALNHKVKRVDSVVRMVNRTDSVVLKAKEVGSVVHKAKIVDLVAHKVKEVDLVAHKTKAVGTVDHKAKGVDSVVHMVKGMGSVAHKAKGVGTVDHKAKGVVHVVKGVNSLAHKTKVVGIVDHKAKEVVSVIHVVKGVDSVAHKIKGVDLVALKSRVLALVLQTLKLKAHTGTVVDLVLVTMMADFLVKLNNSKLTLVLKAAAFLKEAMVRSVNNINRNHRAVDSGNKAVDMGPAHIERRDQL

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 23,         Likelihood:  0.963329
 
 
Length:
415
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
14.4171
Exp number, first 60 AAs:
14.20946
Total prob of N-in:
0.68605
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  26
outside
27  -  415
 
 

Population Genetic Test Statistics

Pi
296.374401
Theta
42.99209
Tajima's D
0.908279
CLR
1.768413
CSRT
0.634068296585171
Interpretation
Uncertain
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