Gene

KWMTBOMO02450  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002559

Annotation

ubiquitin_conjugating_enzyme_E2_[Bombyx_mori]

Location

Bomo_Chr5(+):2332492-2333832      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.354 Mitochondrial   Reliability : 1.649

CDS

ATGGCAGCCCTACCACGTAGAATAATCAAAGAGACACAGCGATTGATGCAGGAGCCGGTGCCCGGGATCAGCGCAGTACCTAGCGAGACAAACGCCCGTTACTTCCACGTTATCGTGACGGGCCCAGAGGACTCGCCTTTCGAAGGAGGACTGTTCAAATTAGAATTATTTCTACCGGAGGATTACCCCATGTCGGCACCTAAGGTTAGGTTTATCACGAAAATATATCATCCTAATATAGACCGACTGGGCCGCATTTGTTTGGACATTCTTAAAGATAAATGGAGTCCAGCTCTACAAATACGCACGGTGCTACTGTCTATTCAGGCTCTGCTGTCAGCACCTAACCCTGACGATCCGCTGGCGAACGACGTTGCCGAATTGTGGAAGGTGAACGAGAGTGAAGCTATTAGGAACGCGAAGGAGTGGACGCGGAGATACGCCATGGACAACTGA

Protein

MAALPRRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAKEWTRRYAMDN

Similarity

Belongs to the ubiquitin-conjugating enzyme family.

Uniprot

A0A2W1BVF9   A0A2A4J7D2   A0A0N0PBU7   A0A1E1WS29   A0A2H1W6K4   Q1HQ36   + More
S4PGI9   A0A212FG39   A0A0J7K0U7   A0A151IEG3   E9IKM7   A0A0L7R2F7   A0A154PKP5   A0A151HYB9   A0A2A3E6A5   V9ICY9   A0A0M8ZQK4   A0A088A3B1   E2B9H8   A0A158NSE8   E2AX53   A0A151WXB7   A0A026W879   D6W8B6   A0A1B6G1Y6   A0A1B6HU24   A0A1B6L583   A0A195ES24   A0A0C9PY78   A0A0L7LR21   A0A0C9RHQ9   A0A310SQT3   A0A2J7R3W4   E0W2J0   A0A1S4ES97   V5G6R4   N6U6Q5   A0A067QUW4   A0A2Z5TTP2   A0A2P8YHJ6   A0A232FDW7   F4W5N4   K7J1X2   A0A1I9WLE8   A0A1J1IGY6   A0A1W4WNT0   A0A0K8TP38   A0A1Y1LVM8   T1RTE4   A0A1B0DKC3   A0A1B6EGV3   A0A1J1IM03   A0A182HNZ7   A0A2R7WF44   A0A0A9YCI0   A0A1L8DT45   U5EZB5   T1GMN4   T1DIY7   Q16FT8   Q5MIQ3   A0A0P4VUM3   T1I671   A0A224XYW9   A0A0V0G7B3   A0A023F5U5   A0A069DPG9   A0A1Q3FH14   B0WH99   A0A084WKU4   A0A182IYN3   A0A182XEX1   A0A182VEY4   A0A182YLB5   A0A182MJR9   A0A182P8Q7   A0A182R022   A0A182N1R1   A0A182JZX2   A0A182WAH8   A0A182LBM1   Q7Q9K0   A0A182RX13   A0A182F9N6   T1DNP1   A0A2M3ZHB2   A0A2M4AIQ1   A0A2M4C2N2   W5JQ37   B3MZT3   A0A1D2N6A8   A0A1D2NH33   A0A336LSQ3   A0A0M4F9M7   A0A2S2NWN4   A0A1W4VUA9   A0A3B0JXN2   B4H0K9   B4Q2P5   B4IG91  

Pubmed

28756777    26354079    19121390    23622113    22118469    21282665    + More
20798317    21347285    24508170    30249741    18362917    19820115    26227816    20566863    23537049    24845553    26760975    29403074    28648823    21719571    20075255    27538518    26369729    28004739    25401762    26823975    24330624    17510324    17244540    24945155    26483478    27129103    25474469    26334808    24438588    25244985    20966253    12364791    14747013    17210077    20920257    23761445    17994087    18057021    27289101    17550304   

EMBL

KZ149951    PZC76636.1    NWSH01002604    PCG67871.1    KQ460796    KPJ12159.1    + More
GDQN01001234    JAT89820.1    ODYU01006524    SOQ48452.1    BABH01014585    DQ443216    ABF51305.1    GAIX01003642    JAA88918.1    AGBW02008722    OWR52698.1    LBMM01018398    KMQ83796.1    KQ977894    KYM98957.1    GL764021    EFZ18873.1    KQ414666    KOC65013.1    KQ434938    KZC12044.1    KQ976730    KYM76470.1    KZ288354    PBC27238.1    JR039066    AEY58517.1    KQ435900    KOX69095.1    GL446527    EFN87661.1    ADTU01024876    ADTU01024877    GL443520    EFN62003.1    KQ982669    KYQ52456.1    KK107347    QOIP01000007    EZA52265.1    RLU20330.1    KQ971307    EFA10928.1    GECZ01013312    JAS56457.1    GECU01029530    JAS78176.1    GEBQ01021147    GEBQ01000152    JAT18830.1    JAT39825.1    KQ981993    KYN31055.1    GBYB01006493    JAG76260.1    JTDY01000276    KOB77948.1    GBYB01006491    GBYB01006492    JAG76258.1    JAG76259.1    KQ760133    OAD61782.1    NEVH01007818    PNF35524.1    DS235878    EEB19846.1    GALX01002691    JAB65775.1    APGK01047231    KB741077    KB631792    ENN74247.1    ERL86125.1    KK852921    KDR13781.1    FX985838    BBA93725.1    PYGN01000591    PSN43712.1    NNAY01000355    OXU28951.1    GL887655    EGI70531.1    KU932332    APA33968.1    CVRI01000048    CRK99034.1    GDAI01001494    JAI16109.1    GEZM01045881    JAV77642.1    KC569748    AGO46417.1    AJVK01066813    GEDC01000194    JAS37104.1    CVRI01000051    CRK99497.1    APCN01002820    KK854679    PTY17851.1    GBHO01014791    GBRD01013307    GDHC01007926    JAG28813.1    JAG52519.1    JAQ10703.1    GFDF01004458    JAV09626.1    GANO01001092    JAB58779.1    CAQQ02026378    GALA01000656    JAA94196.1    CH478382    EAT33096.1    EAT33097.1    JXUM01125342    JXUM01145687    AY826157    GAPW01005469    KQ570031    KQ566934    AAV90729.1    JAC08129.1    KXJ68469.1    KXJ69718.1    GDKW01000866    JAI55729.1    ACPB03023977    GFTR01002616    JAW13810.1    GECL01002802    JAP03322.1    GBBI01002157    JAC16555.1    GBGD01003308    JAC85581.1    GFDL01008220    JAV26825.1    DS231933    EDS27557.1    ATLV01024147    KE525350    KFB50838.1    AXCP01006002    AXCM01001476    AXCN02000987    AAAB01008900    EAA09423.2    GAMD01002680    JAA98910.1    GGFM01007173    MBW27924.1    GGFK01007339    MBW40660.1    GGFJ01010280    MBW59421.1    ADMH02000800    GGFL01004234    ETN65000.1    MBW68412.1    CH902635    EDV33884.1    KPU74824.1    KPU74825.1    KPU74826.1    LJIJ01000186    ODN00787.1    LJIJ01000044    ODN04405.1    UFQS01000096    UFQT01000096    SSW99363.1    SSX19743.1    CP012528    ALC48957.1    GGMR01008843    MBY21462.1    OUUW01000011    SPP86814.1    CH479200    EDW29804.1    CM000162    EDX01639.1    CH480835    EDW48825.1   

Proteomes

UP000218220    UP000053240    UP000005204    UP000007151    UP000036403    UP000078542    + More
UP000053825    UP000076502    UP000078540    UP000242457    UP000053105    UP000005203    UP000008237    UP000005205    UP000000311    UP000075809    UP000053097    UP000279307    UP000007266    UP000078541    UP000037510    UP000235965    UP000009046    UP000079169    UP000019118    UP000030742    UP000027135    UP000245037    UP000215335    UP000007755    UP000002358    UP000183832    UP000192223    UP000092462    UP000075840    UP000015102    UP000008820    UP000069940    UP000249989    UP000015103    UP000002320    UP000030765    UP000075880    UP000076407    UP000075903    UP000076408    UP000075883    UP000075885    UP000075886    UP000075884    UP000075881    UP000075920    UP000075882    UP000007062    UP000075900    UP000069272    UP000000673    UP000007801    UP000094527    UP000092553    UP000192221    UP000268350    UP000008744    UP000002282    UP000001292   

PRIDE

Q1HQ36   

Pfam

PF00179   UQ_con

Interpro

IPR000608   UBQ-conjugat_E2        + More
IPR016135   UBQ-conjugating_enzyme/RWD       
IPR023313   UBQ-conjugating_AS       

SUPFAM

SSF54495   SSF54495       

Gene 3D

3.10.110.10    

CDD

cd00195  UBCc

ProteinModelPortal

A0A2W1BVF9   A0A2A4J7D2   A0A0N0PBU7   A0A1E1WS29   A0A2H1W6K4   Q1HQ36   + More
S4PGI9   A0A212FG39   A0A0J7K0U7   A0A151IEG3   E9IKM7   A0A0L7R2F7   A0A154PKP5   A0A151HYB9   A0A2A3E6A5   V9ICY9   A0A0M8ZQK4   A0A088A3B1   E2B9H8   A0A158NSE8   E2AX53   A0A151WXB7   A0A026W879   D6W8B6   A0A1B6G1Y6   A0A1B6HU24   A0A1B6L583   A0A195ES24   A0A0C9PY78   A0A0L7LR21   A0A0C9RHQ9   A0A310SQT3   A0A2J7R3W4   E0W2J0   A0A1S4ES97   V5G6R4   N6U6Q5   A0A067QUW4   A0A2Z5TTP2   A0A2P8YHJ6   A0A232FDW7   F4W5N4   K7J1X2   A0A1I9WLE8   A0A1J1IGY6   A0A1W4WNT0   A0A0K8TP38   A0A1Y1LVM8   T1RTE4   A0A1B0DKC3   A0A1B6EGV3   A0A1J1IM03   A0A182HNZ7   A0A2R7WF44   A0A0A9YCI0   A0A1L8DT45   U5EZB5   T1GMN4   T1DIY7   Q16FT8   Q5MIQ3   A0A0P4VUM3   T1I671   A0A224XYW9   A0A0V0G7B3   A0A023F5U5   A0A069DPG9   A0A1Q3FH14   B0WH99   A0A084WKU4   A0A182IYN3   A0A182XEX1   A0A182VEY4   A0A182YLB5   A0A182MJR9   A0A182P8Q7   A0A182R022   A0A182N1R1   A0A182JZX2   A0A182WAH8   A0A182LBM1   Q7Q9K0   A0A182RX13   A0A182F9N6   T1DNP1   A0A2M3ZHB2   A0A2M4AIQ1   A0A2M4C2N2   W5JQ37   B3MZT3   A0A1D2N6A8   A0A1D2NH33   A0A336LSQ3   A0A0M4F9M7   A0A2S2NWN4   A0A1W4VUA9   A0A3B0JXN2   B4H0K9   B4Q2P5   B4IG91  

PDB

4IP3     E-value=2.68322e-58,     Score=565

KEGG

732928    K10580 ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23] | (RefSeq) Ubc13, BmUbc13; ubiquitin conjugat

PATHWAY

04120    Ubiquitin mediated proteolysis - Bombyx mori (domestic silkworm)
04624    Toll and Imd signaling pathway - Bombyx mori (domestic silkworm)

GO

GO:0016740   GO:0005524   GO:0061631   GO:0005634   GO:0006301   GO:0070534   GO:0016874   GO:0046330   GO:0051124   GO:1902916   GO:0000209   GO:0007630   GO:0045977   GO:0031625   GO:0061057   GO:0072347   GO:0008594   GO:0035370   GO:0048471   GO:0007412   GO:0031624   GO:0007629   GO:0010942   GO:0007625   GO:0006979   GO:0060074  

Length:

151

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00527

Exp number, first 60 AAs:

0.00023

Total prob of N-in:

0.32025

outside

1  -  151

 

 

Pi

168.26074

Theta

190.285796

Tajima's D

-0.563265

CLR

7.054356

CSRT

0.230888455577221

Interpretation

Uncertain