Gene

KWMTBOMO02446

Pre Gene Modal

BGIBMGA014506

Annotation

neuropeptide_receptor_A17_[Bombyx_mori]

Location

Bomo_Chr5(-):2184110-2187021      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.171

CDS

ATGGCAGCCCTAGCGTCTGGTGGCGCTGCCAGGCTCCGCACCCCGCAAATGCTGAGCGCGTGCGCGGCAGATTTCTTGGTTTGCGCGGCGAGTGCACCTCTTGCGGCAACACGCGCTGCTACCGTCGAATCACTACCATGTCATGTCACTTATTACATCGAGACATTCCCGGTGGCGGCAAGTACGTTATCCTTAGTGGCGATCGCGGCAGATCGCTGTGGAGCAATACACCGTGGCCGAGGTACCACGCTCTGTTCAAGGCCCTTCCTTGCTGTTGCTGCAGTGTGGTCTATGGCGCTACTGCTTGGTGCCGCAGCATTCACAACAACTTGCATAACGTGCCCGCCACTCGCAGCCGTACATGCAGTAGTGGCTTTTTGCTTCCCGGTCATTGCCGTGGCGAGATGCCATTGGTCGGTTCGTGTCAAGCTGACTGCATTATCGCTGACAGCACGCGCAGCTCACGGAGAGCTACCTCTACCAGTTCCACTGATGCGGCGTCCGACTCATGTCATTATCGTTGCTGGAGTGGGACCTAGAGAAAGACGCGACGCAGTGGATGTTGGTGATGCCAGATCTAAGAAAAAGCTACAGCCCAGTCTTCTGGGTCCGCAACCGCAAACCTCGACGCTGCGCTCACGTCGACGTCTCGGCAACGTGTTGATGGGCATCGCTGGAATCTTCGCTATGTGCTGGTGTCCGCATGCCGCGATAGTGATATGTGGATCATTTGGTATCCACGTCCCTGAAATGGTTGGTCACTACGCGCTTCTTCTGGGTTATGCGCACTCAGCCTTGAATGCTGTAGCGTACTGGGTCTTGAACCGGCACGCTCTTACGTCAGCGTGCACCGCCTGGCACCTTCCTCAGCTGCGCGTCAGGGAGGAGAGACCGTCTTCTACCAACGAAGCGGCACTAGGCGCTTTCCACCCCCGGCTCGCGAGACCTGCTCCGTCGCCTCGCCCCCCTCCCTCCAGCTTCTTATATTGA

Protein

MAALASGGAARLRTPQMLSACAADFLVCAASAPLAATRAATVESLPCHVTYYIETFPVAASTLSLVAIAADRCGAIHRGRGTTLCSRPFLAVAAVWSMALLLGAAAFTTTCITCPPLAAVHAVVAFCFPVIAVARCHWSVRVKLTALSLTARAAHGELPLPVPLMRRPTHVIIVAGVGPRERRDAVDVGDARSKKKLQPSLLGPQPQTSTLRSRRRLGNVLMGIAGIFAMCWCPHAAIVICGSFGIHVPEMVGHYALLLGYAHSALNAVAYWVLNRHALTSACTAWHLPQLRVREERPSSTNEAALGAFHPRLARPAPSPRPPPSSFLY

Similarity

Belongs to the G-protein coupled receptor 1 family.
Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.

Uniprot

B3XXN0   A0A2H1WFL4   A0A2W1BNK8   A0A0S1YD79   A0A0L7L6V2   A0A194Q422   + More
A0A212EYU5   A0A0N0PFR0   D6W7I4   A0A1W4XGI1   A0A336LJ44   B4G6J2   Q29PN5   A0A3B0KI70   B4JB12   B3MKI9   B4NZQ9   B4I1Q5   A0A0J9QWL4   B3N9R4   B4KL72   W8C0X1   B4LRL5   A0A1I8NXM7   U3U8Y8   A0A1A9W853   A0A1A9V1J1   A0A1A9ZWA4   A0A1B0FDZ2   A0A0L0C9G4   A0A1A9YLI1   A0A1B0BQ19   A0A1I8MM44   E0VQM3   A0A0M4DZS8   A0A2U9PFU9   A0A3Q0JHF4   A0A2S2NLA1   A0A2J7Q3N6   A0A2S2QCV9   A0A2H8TLX2   J9KBZ3   A0A091KKJ1   A0A091SBD5   A0A151NHS6  

Pubmed

18725956    28756777    26227816    26354079    22118469    18362917    + More
19820115    17994087    15632085    23185243    18057021    17550304    22936249    24495485    23932938    26108605    25315136    20566863    22293439   

EMBL

AB330438    BAG68416.1    ODYU01008284    SOQ51736.1    KZ149951    PZC76639.1    + More
KT031015    RSAL01000095    ALM88313.1    RVE47790.1    JTDY01002560    KOB71177.1    KQ459465    KPJ00288.1    AGBW02011433    OWR46678.1    LADJ01052618    KPJ21541.1    KQ971307    EFA11282.2    UFQT01000017    SSX17870.1    CH479180    EDW28217.1    CH379058    EAL34257.1    KRT03320.1    OUUW01000010    SPP86109.1    CH916368    EDW02882.1    CH902620    EDV31542.1    KPU73464.1    CM000157    EDW88843.1    CH480820    EDW54462.1    CM002910    KMY88452.1    CH954177    EDV58559.1    CH933807    EDW11733.2    KRG02872.1    GAMC01001223    JAC05333.1    CH940649    EDW63610.1    KRF81188.1    AB817300    BAO01067.1    CCAG010016923    JRES01000699    KNC29078.1    JXJN01018357    DS235430    EEB15679.1    CP012523    ALC38166.1    MG550206    AWT50640.1    GGMR01005298    MBY17917.1    NEVH01019066    PNF23169.1    GGMS01006375    MBY75578.1    GFXV01003351    MBW15156.1    ABLF02029140    ABLF02029142    ABLF02029144    ABLF02029145    ABLF02029147    ABLF02029148    ABLF02029149    KK747066    KFP40567.1    KK946896    KFQ55130.1    AKHW03002956    KYO36348.1   

Proteomes

UP000283053    UP000037510    UP000053268    UP000007151    UP000053240    UP000007266    + More
UP000192223    UP000008744    UP000001819    UP000268350    UP000001070    UP000007801    UP000002282    UP000001292    UP000008711    UP000009192    UP000008792    UP000095300    UP000091820    UP000078200    UP000092445    UP000092444    UP000037069    UP000092443    UP000092460    UP000095301    UP000009046    UP000092553    UP000079169    UP000235965    UP000007819    UP000050525   

PRIDE

B3XXN0   

Pfam

PF00001   7tm_1        + More
PF01699   Na_Ca_ex

Interpro

IPR000276   GPCR_Rhodpsn        + More
IPR017452   GPCR_Rhodpsn_7TM       
IPR004837   NaCa_Exmemb       
IPR000405   Galanin_rcpt       

ProteinModelPortal

B3XXN0   A0A2H1WFL4   A0A2W1BNK8   A0A0S1YD79   A0A0L7L6V2   A0A194Q422   + More
A0A212EYU5   A0A0N0PFR0   D6W7I4   A0A1W4XGI1   A0A336LJ44   B4G6J2   Q29PN5   A0A3B0KI70   B4JB12   B3MKI9   B4NZQ9   B4I1Q5   A0A0J9QWL4   B3N9R4   B4KL72   W8C0X1   B4LRL5   A0A1I8NXM7   U3U8Y8   A0A1A9W853   A0A1A9V1J1   A0A1A9ZWA4   A0A1B0FDZ2   A0A0L0C9G4   A0A1A9YLI1   A0A1B0BQ19   A0A1I8MM44   E0VQM3   A0A0M4DZS8   A0A2U9PFU9   A0A3Q0JHF4   A0A2S2NLA1   A0A2J7Q3N6   A0A2S2QCV9   A0A2H8TLX2   J9KBZ3   A0A091KKJ1   A0A091SBD5   A0A151NHS6  

PDB

5WIV     E-value=0.0681259,     Score=83

KEGG

100174928    K04231 galanin receptor 2 | (RefSeq) NGR-A17, BNGR-A17; neuropeptide receptor A17

PATHWAY

04080    Neuroactive ligand-receptor interaction - Bombyx mori (domestic silkworm)

GO

GO:0004930   GO:0007218   GO:0016021   GO:0055085   GO:0007186   GO:0007020   GO:0031122   GO:0003924   GO:0005525   GO:0004518   GO:0006281   GO:0048384  

Length:

329

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

119.14419

Exp number, first 60 AAs:

23.00512

Total prob of N-in:

0.66902

POSSIBLE N-term signal

sequence

outside

1  -  47

TMhelix

48  -  70

inside

71  -  89

TMhelix

90  -  112

outside

113  -  116

TMhelix

117  -  139

inside

140  -  216

TMhelix

217  -  239

outside

240  -  251

TMhelix

252  -  274

inside

275  -  329

 

 

Pi

240.781033

Theta

184.566605

Tajima's D

0.976815

CLR

0.144593

CSRT

0.655217239138043

Interpretation

Uncertain