Gene

KWMTBOMO02444

Pre Gene Modal

BGIBMGA013505

Annotation

hypothetical_protein_RR46_02679_[Papilio_xuthus]

Location

Bomo_Chr5(-):1961186-1961947      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.476

CDS

ATGAATAATCCAGACGAAATTAAAAGACGTGTTCCGCTATACCCAGGCTTCCCAGAGTTAGCAAGATCGGATGTCAGCATATACCCATCATACACAAAATTAGGATTGGCGTATCGCGTGGTTTGCCGCCATCGTTACCATTGGGCTAAAGTTGCGCAACGCAAGCAGTTTATGAAAGAACTACACAGCTTCGAGAAATTACAGGCCAACGCCCTAGATGGTGTTAGAGTTCATCGGGAATTTTCTCAGGGTATACTGTCACATGTGATACCCCCACGCAGATACATGCAGAAACTGACAACGGACCCTTTGACTCCTAAAGAAAGAATGCGTGTTGAAGAGATTATAAGTGGAAGAGTTAATTTTGGACAGAAATAA

Protein

MNNPDEIKRRVPLYPGFPELARSDVSIYPSYTKLGLAYRVVCRHRYHWAKVAQRKQFMKELHSFEKLQANALDGVRVHREFSQGILSHVIPPRRYMQKLTTDPLTPKERMRVEEIISGRVNFGQK

Uniprot

H9JVE2   A0A2W1BFY9   A0A2H1W8M2   A0A194QA32   A0A2A4JZG4   A0A212FI71   + More
A0A0L7LTH5   A0A0N1PHJ5   A0A2P8XKM2   A0A158NML5   A0A195AZU0   F4WI41   A0A151IZC0   E2AZI7   A0A151X0V5   A0A195CVQ0   E2B8Z2   A0A026WI74   A0A3L8DJZ4   A0A1B6G2P1   E9IXI3   N6TGX7   D6WML1   A0A154P017   A0A0N0BJ16   A0A151JWJ5   A0A1B6KZB3   A0A0C9QDY9   A0A1B6LAH4   A0A088ALR5   A0A182RQX7   A0A182SB43   A0A182PDS4   A0A182WJX5   A0A182N829   A0A182V7H3   A0A182U0Q3   A7UU21   A0A182XP85   A0A182Y2R9   A0A182I1E1   A0A0L0CE87   A0A3B0K7P5   A0A1W4VLJ9   A0A3B0KEH1   A0A1M6ZEU6   A0A1H6DI66  

Pubmed

19121390    28756777    26354079    22118469    26227816    29403074    + More
21347285    21719571    20798317    24508170    30249741    21282665    23537049    18362917    19820115    12364791    14747013    17210077    25244985    26108605   

EMBL

BABH01036028    KZ150213    PZC72147.1    ODYU01007043    SOQ49449.1    KQ459465    + More
KPJ00291.1    NWSH01000385    PCG76782.1    AGBW02008434    OWR53409.1    JTDY01000137    KOB78659.1    KQ460796    KPJ12163.1    PYGN01001852    PSN32522.1    ADTU01020484    KQ976697    KYM77550.1    GL888172    EGI66134.1    KQ980710    KYN14450.1    GL444238    EFN61151.1    KQ982601    KYQ54014.1    KQ977231    KYN04751.1    GL446405    EFN87826.1    KK107238    EZA54809.1    QOIP01000007    RLU20493.1    GECZ01013064    JAS56705.1    GL766755    EFZ14698.1    APGK01027560    APGK01027561    KB740664    ENN79674.1    KQ971343    EFA03283.1    KQ434786    KZC05201.1    KQ435725    KOX78264.1    KQ981676    KYN38156.1    GEBQ01023232    JAT16745.1    GBYB01001534    GBYB01014510    JAG71301.1    JAG84277.1    GEBQ01019279    JAT20698.1    AAAB01008960    EDO63798.1    APCN01000054    JRES01000503    KNC30565.1    OUUW01000008    SPP84090.1    SPP84086.1    FRBI01000003    SHL28865.1    FNVU01000015    SEG84266.1   

Proteomes

UP000005204    UP000053268    UP000218220    UP000007151    UP000037510    UP000053240    + More
UP000245037    UP000005205    UP000078540    UP000007755    UP000078492    UP000000311    UP000075809    UP000078542    UP000008237    UP000053097    UP000279307    UP000019118    UP000007266    UP000076502    UP000053105    UP000078541    UP000005203    UP000075900    UP000075901    UP000075885    UP000075920    UP000075884    UP000075903    UP000075902    UP000007062    UP000076407    UP000076408    UP000075840    UP000037069    UP000268350    UP000192221    UP000184111    UP000236754   

PRIDE

H9JVE2   

Pfam

PF16037   DUF4790        + More
PF00072   Response_reg
PF00196   GerE

Interpro

IPR032004   DUF4790        + More
IPR016032   Sig_transdc_resp-reg_C-effctor       
IPR036388   WH-like_DNA-bd_sf       
IPR011006   CheY-like_superfamily       
IPR000792   Tscrpt_reg_LuxR_C       
IPR001789   Sig_transdc_resp-reg_receiver       

SUPFAM

SSF46894   SSF46894        + More
SSF52172   SSF52172       

Gene 3D

1.10.10.10    

CDD

cd06170  LuxR_C_like
cd00156  REC

ProteinModelPortal

H9JVE2   A0A2W1BFY9   A0A2H1W8M2   A0A194QA32   A0A2A4JZG4   A0A212FI71   + More
A0A0L7LTH5   A0A0N1PHJ5   A0A2P8XKM2   A0A158NML5   A0A195AZU0   F4WI41   A0A151IZC0   E2AZI7   A0A151X0V5   A0A195CVQ0   E2B8Z2   A0A026WI74   A0A3L8DJZ4   A0A1B6G2P1   E9IXI3   N6TGX7   D6WML1   A0A154P017   A0A0N0BJ16   A0A151JWJ5   A0A1B6KZB3   A0A0C9QDY9   A0A1B6LAH4   A0A088ALR5   A0A182RQX7   A0A182SB43   A0A182PDS4   A0A182WJX5   A0A182N829   A0A182V7H3   A0A182U0Q3   A7UU21   A0A182XP85   A0A182Y2R9   A0A182I1E1   A0A0L0CE87   A0A3B0K7P5   A0A1W4VLJ9   A0A3B0KEH1   A0A1M6ZEU6   A0A1H6DI66  

KEGG

101739361    no KO assigned | (RefSeq) uncharacterized LOC101739361

GO

GO:0003677   GO:0006355   GO:0000160  

Length:

125

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.05976

Exp number, first 60 AAs:

0.05976

Total prob of N-in:

0.56689

inside

1  -  125

 

 

Pi

139.589506

Theta

138.60662

Tajima's D

-0.485997

CLR

61.51994

CSRT

0.245887705614719

Interpretation

Uncertain