Gene

KWMTBOMO02443  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013503

Annotation

CG10993-like_protein_[Bombyx_mori]

Location

Bomo_Chr5(+):1959698-1961116      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.246

CDS

ATGCCTGATGTTGAAACAGAAAGAGTACCCGAGAATGGTACAGATTGTGAAATCAACCATAAAAATATAGACAGAACATCTAAATTTGATAACAAACTATTAAAACAGAAAACACGAAAACGAGGTATAATATTTTTGTCGACGATTCCCCCTTACATGAACGTTGCCAAAATACGTGAAATATTCAGTCAGTTCGGAGAAGTTGGTCGAATTTATCTTCAGCCGACTGGAAAACCAGGTGAAAAACGCAAAAGAGTTCCTAATCAATTCTCAGAAGGGTGGGTTGAGTTTGAAAAAAAGAAGATTGCAAAGCAAGTCGCAGTGAAATTAAACAATACAAAAATTGGCACAAGAAAGAAATCCCGCTACTATGACATGATTTGGAACATTAAATATATCCCTAGATTTAAATGGATTCATCTCAGTGAAAGATTAGCATACGAGAGGGCTGCAATGAAACAGAGGCTGAGGGCTGAAATTGCACAGGCAAAGAAGGAAGCACACTATTTACAGAGTAATGTAGAAAAAAGTAAAAAAATAAAAAAGAAGAAAAGCATGGAAAATAATTTAACTTCTAATTAA

Protein

MPDVETERVPENGTDCEINHKNIDRTSKFDNKLLKQKTRKRGIIFLSTIPPYMNVAKIREIFSQFGEVGRIYLQPTGKPGEKRKRVPNQFSEGWVEFEKKKIAKQVAVKLNNTKIGTRKKSRYYDMIWNIKYIPRFKWIHLSERLAYERAAMKQRLRAEIAQAKKEAHYLQSNVEKSKKIKKKKSMENNLTSN

Uniprot

H9JVE0   Q1HDZ9   A0A194Q423   A0A2A4JZ55   A0A1E1WIX5   A0A2W1BAN7   + More
A0A2H1W8Q7   A0A0L7LT93   A0A212FI57   S4P994   A0A0N1I6G7   A0A0N0U2T7   A0A154NZR2   A0A067QRK0   A0A2A3E283   A0A310S4P7   A0A088A6Y1   A0A0L7RIZ7   A0A1B6HWH7   E0W4C9   A0A1B6CRS9   F4WC48   A0A1B6LK07   A0A1S3D785   A0A195ELG2   J9JPE4   A0A1W4XUK5   E9J6U5   A0A195FR40   A0A195BKD9   A0A3L8DA22   D6WLW3   A0A195CUS4   A0A158NA15   A0A1S3IVA3   A0A1Y1NB47   E2BFS2   A0A3B0KPL3   B4H2G4   A0A0N7Z8I9   B4L4T2   A0A069DR38   B3MZJ9   A0A151WXA0   A0A0M5J150   B4M2C8   W8C8J5   B4JMI9   A0A0V0GBR3   A0A1I8N5P4   A0A1A9VBY9   A0A023F0K9   B4NDY7   Q171F6   A0A1W4UQD1   A0A1I8PVX5   A0A1Q3F3N0   A0A1B0A3G4   A7SMS8   T1HTQ1   B4PZY3   Q29IG5   A0A182GC92   B3NUI0   K1QMP8   A0A0P5LTI6   A0A336MAR9   A0A0L0C9T7   A0A1B0FCT8   A0A0K8UPE3   D3TQE6   A0A0N8DML4   A0A034WBU8   T1GAB8   B0W9K0   A0A1W0X4U0   A0A1A9W355   A0A1A9YDE9   A0A1W0X4I7   A0A3M6UZA5   A0A1B0B025   C3ZA48   B7QIM3   T2M3R4   A0A0P6JLL7   A0A1J1HTG8   A0A210PEN7   A0A164NH80   A0A131XWW8   A0A1D2M3R3   N6SY48  

Pubmed

19121390    26354079    28756777    26227816    22118469    23622113    + More
24845553    20566863    21719571    21282665    30249741    18362917    19820115    21347285    28004739    20798317    17994087    27129103    26334808    24495485    25315136    25474469    17510324    17615350    17550304    15632085    26483478    22992520    26108605    20353571    25348373    30382153    18563158    24065732    28812685    27289101    23537049   

EMBL

BABH01036028    DQ497198    ABF55963.1    KQ459465    KPJ00292.1    NWSH01000385    + More
PCG76783.1    GDQN01004081    JAT86973.1    KZ150213    PZC72148.1    ODYU01007043    SOQ49450.1    JTDY01000137    KOB78652.1    AGBW02008434    OWR53410.1    GAIX01005606    JAA86954.1    KQ460796    KPJ12164.1    KQ435969    KOX67832.1    KQ434786    KZC05072.1    KK853953    KDQ71485.1    KZ288432    PBC25805.1    KQ775960    OAD52252.1    KQ414583    KOC70804.1    GECU01028700    JAS79006.1    DS235886    EEB20485.1    GEDC01021170    JAS16128.1    GL888070    EGI68028.1    GEBQ01015967    JAT24010.1    KQ978739    KYN28719.1    ABLF02008063    GL768347    EFZ11458.1    KQ981305    KYN42896.1    KQ976455    KYM85080.1    QOIP01000011    RLU17161.1    KQ971343    EFA04174.1    KQ977276    KYN04433.1    ADTU01009937    GEZM01007526    GEZM01007525    JAV95111.1    GL448039    EFN85460.1    OUUW01000015    SPP88559.1    CH479204    EDW30531.1    GDKW01003219    JAI53376.1    CH933810    EDW07560.2    GBGD01002772    JAC86117.1    CH902635    EDV33800.1    KQ982686    KYQ52291.1    CP012528    ALC49174.1    CH940651    EDW65832.2    GAMC01003004    JAC03552.1    CH916371    EDV91932.1    GECL01000634    JAP05490.1    GBBI01003722    JAC14990.1    CH964239    EDW81956.1    CH477456    EAT40635.1    GFDL01012873    JAV22172.1    DS469712    EDO34990.1    ACPB03009761    CM000162    EDX02189.1    CH379063    EAL32688.3    JXUM01242035    KQ635362    KXJ62478.1    CH954180    EDV46303.2    JH817849    EKC30110.1    GDIQ01175578    JAK76147.1    UFQT01000627    SSX25883.1    JRES01000720    KNC28970.1    CCAG010011685    GDHF01023745    JAI28569.1    EZ423648    ADD19924.1    GDIP01018935    JAM84780.1    GAKP01007342    JAC51610.1    CAQQ02096596    CAQQ02096597    CAQQ02096598    CAQQ02096599    DS231864    EDS40225.1    MTYJ01000018    OQV22302.1    OQV22301.1    RCHS01000416    RMX58947.1    JXJN01006524    GG666601    EEN50636.1    ABJB010776461    DS947085    EEC18695.1    HAAD01000365    CDG66597.1    GDIQ01014768    JAN79969.1    CVRI01000020    CRK91293.1    NEDP02076746    OWF34937.1    LRGB01002851    KZS05951.1    GEFM01005058    JAP70738.1    LJIJ01004974    ODM87610.1    APGK01052414    KB741212    KB632279    ENN72709.1    ERL91291.1   

Proteomes

UP000005204    UP000053268    UP000218220    UP000037510    UP000007151    UP000053240    + More
UP000053105    UP000076502    UP000027135    UP000242457    UP000005203    UP000053825    UP000009046    UP000007755    UP000079169    UP000078492    UP000007819    UP000192223    UP000078541    UP000078540    UP000279307    UP000007266    UP000078542    UP000005205    UP000085678    UP000008237    UP000268350    UP000008744    UP000009192    UP000007801    UP000075809    UP000092553    UP000008792    UP000001070    UP000095301    UP000078200    UP000007798    UP000008820    UP000192221    UP000095300    UP000092445    UP000001593    UP000015103    UP000002282    UP000001819    UP000069940    UP000249989    UP000008711    UP000005408    UP000037069    UP000092444    UP000015102    UP000002320    UP000091820    UP000092443    UP000275408    UP000092460    UP000001554    UP000001555    UP000183832    UP000242188    UP000076858    UP000094527    UP000019118    UP000030742   

PRIDE

H9JVE0    Q1HDZ9   

Pfam

PF00076   RRM_1        + More
PF01428   zf-AN1

Interpro

IPR034353   ABT1/ESF2_RRM        + More
IPR035979   RBD_domain_sf       
IPR000504   RRM_dom       
IPR039119   ABT1/Esf2       
IPR012677   Nucleotide-bd_a/b_plait_sf       
IPR000058   Znf_AN1       
IPR035896   AN1-like_Znf       

SUPFAM

SSF54928   SSF54928        + More
SSF118310   SSF118310       

Gene 3D

3.30.70.330     4.10.1110.10    

CDD

cd12263  RRM_ABT1_like

ProteinModelPortal

H9JVE0   Q1HDZ9   A0A194Q423   A0A2A4JZ55   A0A1E1WIX5   A0A2W1BAN7   + More
A0A2H1W8Q7   A0A0L7LT93   A0A212FI57   S4P994   A0A0N1I6G7   A0A0N0U2T7   A0A154NZR2   A0A067QRK0   A0A2A3E283   A0A310S4P7   A0A088A6Y1   A0A0L7RIZ7   A0A1B6HWH7   E0W4C9   A0A1B6CRS9   F4WC48   A0A1B6LK07   A0A1S3D785   A0A195ELG2   J9JPE4   A0A1W4XUK5   E9J6U5   A0A195FR40   A0A195BKD9   A0A3L8DA22   D6WLW3   A0A195CUS4   A0A158NA15   A0A1S3IVA3   A0A1Y1NB47   E2BFS2   A0A3B0KPL3   B4H2G4   A0A0N7Z8I9   B4L4T2   A0A069DR38   B3MZJ9   A0A151WXA0   A0A0M5J150   B4M2C8   W8C8J5   B4JMI9   A0A0V0GBR3   A0A1I8N5P4   A0A1A9VBY9   A0A023F0K9   B4NDY7   Q171F6   A0A1W4UQD1   A0A1I8PVX5   A0A1Q3F3N0   A0A1B0A3G4   A7SMS8   T1HTQ1   B4PZY3   Q29IG5   A0A182GC92   B3NUI0   K1QMP8   A0A0P5LTI6   A0A336MAR9   A0A0L0C9T7   A0A1B0FCT8   A0A0K8UPE3   D3TQE6   A0A0N8DML4   A0A034WBU8   T1GAB8   B0W9K0   A0A1W0X4U0   A0A1A9W355   A0A1A9YDE9   A0A1W0X4I7   A0A3M6UZA5   A0A1B0B025   C3ZA48   B7QIM3   T2M3R4   A0A0P6JLL7   A0A1J1HTG8   A0A210PEN7   A0A164NH80   A0A131XWW8   A0A1D2M3R3   N6SY48  

KEGG

733051    K14785 ESF2/ABP1 family protein | (RefSeq) CG10993-like protein

GO

GO:0003723   GO:0003676   GO:0000447   GO:0005730   GO:0000480   GO:0000472   GO:0034462   GO:0008270   GO:0000166   GO:0000930   GO:0007020   GO:0031122   GO:0003924   GO:0005525   GO:0004518   GO:0006281   GO:0048384  

PANTHER

PTHR12311  

Length:

193

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.17777

Exp number, first 60 AAs:

0.16475

Total prob of N-in:

0.07930

outside

1  -  193

 

 

Pi

181.245343

Theta

154.824978

Tajima's D

0.536865

CLR

0

CSRT

0.529523523823809

Interpretation

Uncertain