SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02441
Pre Gene Modal
BGIBMGA013502
Annotation
PREDICTED:_protein_pigeon_[Bombyx_mori]
Full name
Protein pigeon      
Alternative Name
Protein linotte
Location in the cell
Cytoplasmic   Reliability : 1.071 PlasmaMembrane   Reliability : 1.5
 

Sequence

CDS
ATGGCTGTTCAAAATATTGCGGTGAAATTGTGTGGAATACTTCAGGCAGCAAGTGAGGAGGAAATTACAGCACGAGAGTGGCGTCTTTTAGGACAAGAACAAGATGGTTCACAACTTCTTACTTGGCTTTCAAATACAAAAAATAATGCGGAGGTCCTCAACATTGGCATATATGTAAATAAAACCAAATCTCTGACTATTCTACACACATTTGACAAGAAAACTAATATCATACAAGCTTCAGTGAATGCGACACAAAGTCTTTTAGCATATGTTGTCAAGAAACTTCCAACTGATGATGCTGAGGCAAAAGAGCCTTTGTACTGTGCTTATTTAATGTGTTTACTTCCTGACAAAGAAAGAGTCAGTGAACAAATTGAAGATAGCTCTACAAAACAAATAATGGTACAATATATATACGGGAAGAGTAATAAATACAGCCCTGGTATAAGAAATGACAGATTCCTGCTGTTCAAACATTTGGAATACATAAAAATATATCGCACGCCAATGTTTCTAAATGAATATGACGATGGAACAGAGAAATGGGGCTTTGATGGCATATATCCTGAACCGGAAACCATTGTAAAAGTTTTTTCCTGGGCTCAGTGGGATTGTGTTAATCAGGTTTTGTACCACATTCATTTTCGACAAGCATCGCAGAGCTTCGCTGAGGGCGAGGAGGTGAAATCTCCCTCAGAAATTACGCCCACTCTATCCGCTCTACAGTTCCACGCCGATCTCCCGCACGAGACTGTCGTGAACATCCCCCTAAGTCTGCCTCACGTATCGAGCTCGGCGGAGGGGGCCGCTTGCGGGGCTTACGAGGACGATCCTATACCATTACGAGTCCACGACTGCAGCCTCGACTTGCAGATCGTGTGCGACCAGCGGGGCGTGTTGTGCATCTGTCATCACTACTTGTACAAGCCCCTAGACGATTCCGCCACATCCCTAGTGCTGGAAGACAGCACGGACCTGAAGGACTCCGGAGTCAACTTCGCGTATTCGATAACCCTGCTGCATCACGGCTGCGTGGTGCACACTGTAGTGCCGGACCTGCCGTGGGCCTTGGCCAAGTCGTTACGGCCATCTTACACTTTATACGAAGAAAATCATCTTTTGGTGAATATACCGATGCTGTACACGCATCTGATAGACATCAGCCTCCACCACGAGCCGTGCTGTCACATCGTCCTGCCGGTGGACGAGTGTGACAGCGGGCCCAGCCTCGCGCCCCTGCTGGGCTGGGGTCAGCACGCCATGGTCGACCTCAATACTCTGGACGTGGTGGCCATGGTCATCCCTGAAAAGGATTTGACCGCGACGTTCAAGAGCAACACGGCCATAGAAAATAAACTCGCCATCATACATTACTTGGTGCAGCACGAGAACAATATGGAATTGGCTGAAGAGCTGATATCGTGGATGTGCCTGAATCAGCGCGGCGGGCTGGGCTCGTTCCAGCGCGTCATGCAAGAGTACCTGGTGGCGACCACGTGCGCGGTCACTCGACGCTCGCTACCCTCTTCCGCACTGGGACTTATGAAGATGCTTCCATTCATGCTGCACCTAAAGTTTTCTGATGTCAAGGTTCGCGACATGTGCGTGTCGGTGAGCCAGGAGAAGCTGTGGAGCAGCAGCGCGGTCGTGCTGGCTCCTCGGCAGCGCGTGTGCCAGTTTTCCGAGGACGTGTGGACTAGGGTCTGGGCGTCTCTGTCCGCTCCGTCAGTCACCCGTCTACATCCGACCGTCGTCACCGATAAGCTGCGAGTGAGCCTGCATTGTTACCAGCCGGAAGCGTTGTCTCGGTGCAGCACCCCGCTGTCCCCGAGCGGCCCGGGGCCCGCGCTGGGTTCTCAACGCCGTTCGTCGCTGGGCAACGGGCAGGACCTGCTGCCCTTCTTTGAACTGGACGTGTGCACTGCCAGCAAACAGGAGCATATAGTGGCTGCGGAACTCGCACTAAGCACACTGGTGGCACAGAACTTGCGCGAGGTGAGCGTGCACCTGATGCGCGAGAGCGGCGGCGCGGCGGGCGTGCAGGGCGGCGTGCACGCGGCCGCCACGCGCTGGGCGGCGGCGCAGCTGGATGCCGCGCGCGCGCTGTGCCGGGCGCTGTGCCGCGCGCTCGCCGCCGTGCCCGCGCACCAGCAGCAGCGCGGATTCACTTTCATTGACGATATGGATCCTAACCACGCATACATACTGTTCAAAGTCCTAGAGCAGTACTACCTGGCGACCGACTCCATAGCGTTCCCTGTGCCGCAAGGATTCACATCATTCTTCACGTACTTGGGTTACCGCACTCTGCCCTTTCCCGCCTTCGCGCAGTACGTGCACAGGAGCGTCTTCGAACTGCAGATCGACGTTCTGAAAGCTATCGTGACTGATAAAGAAGAAGACAAGTGCAGCGTGAACAAGAAGCTGCGGCTGATTCAGGTGGCGGGGGAGGGGCGCGGGCGGCGCGCGCTGGCGGCGTGGGGCGCGCGGGCGGCGCTGGTGCTGCGGGCGCGCGACCACGCCGCCGCGCTGCTGTCCGGCGCCGCGCCCGCCCGCCACGACCGCGCGCGACACCGCCCCGTCCGCGACACCGATGATCTAAGAGAAAACATACATTGGAGGAGTGTCAGAACTTAA
Protein
MAVQNIAVKLCGILQAASEEEITAREWRLLGQEQDGSQLLTWLSNTKNNAEVLNIGIYVNKTKSLTILHTFDKKTNIIQASVNATQSLLAYVVKKLPTDDAEAKEPLYCAYLMCLLPDKERVSEQIEDSSTKQIMVQYIYGKSNKYSPGIRNDRFLLFKHLEYIKIYRTPMFLNEYDDGTEKWGFDGIYPEPETIVKVFSWAQWDCVNQVLYHIHFRQASQSFAEGEEVKSPSEITPTLSALQFHADLPHETVVNIPLSLPHVSSSAEGAACGAYEDDPIPLRVHDCSLDLQIVCDQRGVLCICHHYLYKPLDDSATSLVLEDSTDLKDSGVNFAYSITLLHHGCVVHTVVPDLPWALAKSLRPSYTLYEENHLLVNIPMLYTHLIDISLHHEPCCHIVLPVDECDSGPSLAPLLGWGQHAMVDLNTLDVVAMVIPEKDLTATFKSNTAIENKLAIIHYLVQHENNMELAEELISWMCLNQRGGLGSFQRVMQEYLVATTCAVTRRSLPSSALGLMKMLPFMLHLKFSDVKVRDMCVSVSQEKLWSSSAVVLAPRQRVCQFSEDVWTRVWASLSAPSVTRLHPTVVTDKLRVSLHCYQPEALSRCSTPLSPSGPGPALGSQRRSSLGNGQDLLPFFELDVCTASKQEHIVAAELALSTLVAQNLREVSVHLMRESGGAAGVQGGVHAAATRWAAAQLDAARALCRALCRALAAVPAHQQQRGFTFIDDMDPNHAYILFKVLEQYYLATDSIAFPVPQGFTSFFTYLGYRTLPFPAFAQYVHRSVFELQIDVLKAIVTDKEEDKCSVNKKLRLIQVAGEGRGRRALAAWGARAALVLRARDHAAALLSGAAPARHDRARHRPVRDTDDLRENIHWRSVRT

Summary

Miscellaneous
'Linotte' used in the colloquial sentence 'Tete de linotte' literally means 'Scatterbrain' in French.
Similarity
Belongs to the GSAP family.
Keywords
Complete proteome   Reference proteome  
Feature
chain  Protein pigeon
EMBL
BABH01036029    BABH01036030    BABH01036031    BABH01036032    ODYU01007043    SOQ49452.1    + More
KZ150213    PZC72150.1    KQ459465    KPJ00294.1    AGBW02008434    OWR53412.1    GEZM01017015    GEZM01017013    JAV90972.1    KQ971307    EFA10899.2    GEZM01017012    GEZM01017011    JAV90973.1    PYGN01000905    PSN39504.1    KK107131    EZA58189.1    GL446286    EFN88104.1    NNAY01000955    OXU25744.1    QOIP01000012    RLU15887.1    KZ288282    PBC29555.1    KQ982446    KYQ56335.1    KQ978009    KYM98137.1    KQ434826    KZC07446.1    KQ981305    KYN42990.1    KQ435726    KOX78253.1    KQ414584    KOC70599.1    KQ976455    KYM85166.1    KK853244    KDR09428.1    GBXI01012808    JAD01484.1    GBXI01007978    JAD06314.1    KQ980734    KYN13850.1    ADTU01010074    GDHF01004778    JAI47536.1    GDHF01021535    GDHF01016228    GDHF01009331    JAI30779.1    JAI36086.1    JAI42983.1    GDHF01026748    GDHF01017070    JAI25566.1    JAI35244.1    GL435215    EFN73767.1    GL888529    EGI59686.1    GAKP01011168    JAC47784.1    GAKP01011164    JAC47788.1    GAMC01009672    GAMC01009670    JAB96883.1    JRES01001284    JRES01000418    KNC23936.1    KNC31450.1    UFQS01002029    UFQT01002029    SSX13007.1    SSX32447.1    SSX13006.1    SSX32446.1    AXCM01002194    AJWK01028078    ADMH02000239    ETN67275.1    GGFL01006430    MBW70608.1    JXJN01013003    CCAG010007529    GBGD01000434    JAC88455.1    CH902620    EDV31120.1    KPU73226.1    AAAB01008944    EAA10179.4    AXCN02002069    DS231866    EDS40528.1    GECL01001695    JAP04429.1    APCN01000708    GBBI01003751    JAC14961.1    ATLV01014396    KE524970    KFB38660.1    CH933807    EDW11605.1    UFQT01001120    SSX28999.1    KRG02805.1    CH954179    KQS61900.1    EDV54680.1    GFDL01013093    JAV21952.1    CM000361    EDX05486.1    CH940654    EDW57721.1    KRF77913.1    CM002910    KMY90963.1    CH480822    EDW55734.1    CM000158    KRJ99148.1    EDW90391.1    KMY90964.1    CH963852    EDW75424.2    U32865    AE014134    AY061465    ADV37093.1    CH916372    EDV98730.1    CH379061    EAL33345.2    CH479195    EDW27263.1    KRT04929.1    OUUW01000010    SPP85515.1   
Pfam
PF14959   GSAP-16
Interpro
IPR026172   GSAP_fam        + More
IPR028010   GSAP_C_dom       

Ontologies

Topology

Length:
879
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.11933
Exp number, first 60 AAs:
0.00059
Total prob of N-in:
0.00033
outside
1  -  879
 
 

Population Genetic Test Statistics

Pi
257.795788
Theta
197.774166
Tajima's D
0.740457
CLR
0.381384
CSRT
0.578121093945303
Interpretation
Uncertain
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