SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02429
Pre Gene Modal
BGIBMGA013496
Annotation
PREDICTED:_unconventional_prefoldin_RPB5_interactor_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 2.983
 

Sequence

CDS
ATGAATTTTCTAACAGATATTTACGTTAAGAGACTTGCAGAGAATGAAAAGAATTTACAATTCTGGGTAAATTATTTAAAGGAACTACGAGAACTTGACTTAAATGTTTTTGCGGATAAATTGACAGTACCAACTTTAGTACCAATAGGCAATCGTATATTATTTAGAGGTGAAATAATACATACAAATGAGATTACGGTTTCTTTAGGGGCCGATTATTTTGCCAAGTGTTCGTTGAAACAAGCCGAGATATTAAAACAACATAGAATAAAAGATGCTGAAACCAAAGTAGATATGTACGAAAAAGAATATGATTATCTGAAAAGTCAAATAGCATTTAGCAATGAAAACATTTATGGAACTAAAGCCGAAGAAATAGTAGAAATATATTCTGAAGAAGAAGACAAAGCCTGGAGAATAAAACACAGACAAAATGTAAGGAAATATAAAAAAGACCAGCAGATTCAAGAAAAAATAAATAATCTAATATCTGATGAAGAGCTTTGGAACAGGTTAGATGAACTTGAACTTCAAGAAGAATTAGAGAATGAGTTAGTGGAGATGAATAATAACTCGAAATTCAAGTTTACTGAAAATCCCTTTGTTGAACAGGAAGAAGCTCTATTAAAAATGAATGAAGTTGAAAGTGTCAACAATAATAAACTTATACCTGAAGAAATAAAATCAACAGAAACTAATCTAGTGACTAAACAAATTCAGGAGAACAATAATTTAATTTCAAAAGTCAATATTCCAGGACATAATTCCAAAATGGAGCTATTGCAGCAAGTTATAGAGAAACAGACTGAATTAGAACGTAAATTGATCCAATTGCAAAATAGGGAAATTATAACCGAAGGTAAGACAGAACAGGAATTAATATCGAAATTGGATGAGATGGAACAACTGGAAGAGCTAGAAGATGAAATGGACAGATTAGATCATATATTACTAAATGAAAATTTTGATTTGGAAGAACAAGATCAAGAATTAGAGGTAGAAATAGATGATGATAAATGCCAAGATACAAATGAGACAAAACTAAAAAAGAGTGTTTCATTTGCTGATAACAGTGATACGGAAACTTTAGAGATTCTTTTCAAACACAGTGATGTAGAGCCAAGTCAAGAGATGTATTGCCCGGAGAAAGGTATTCGAAAACCAAGTGATGTGTATGAAATGTTCCCAAATTTAATAATTGGAGCTACTTCTATACTGAAGAAATCTAAATACATTAATGAAGATTTTGTCGAAGTTGAAAATTCATTTAAAGCAAATAAAAAAGTACTTTTTCCGACATTACATGAGGAAGATTTAATTAAAACTGTCGGCGTCAAAGATATTCAAGAAAAAGCCAATAATACTCAAGACAAAAAGAAATGTAATTCCACAAGGCCTATGAGCTTGTTCAAGAAAAAAAGGATGCAAAATAAAAAGTAA
Protein
MNFLTDIYVKRLAENEKNLQFWVNYLKELRELDLNVFADKLTVPTLVPIGNRILFRGEIIHTNEITVSLGADYFAKCSLKQAEILKQHRIKDAETKVDMYEKEYDYLKSQIAFSNENIYGTKAEEIVEIYSEEEDKAWRIKHRQNVRKYKKDQQIQEKINNLISDEELWNRLDELELQEELENELVEMNNNSKFKFTENPFVEQEEALLKMNEVESVNNNKLIPEEIKSTETNLVTKQIQENNNLISKVNIPGHNSKMELLQQVIEKQTELERKLIQLQNREIITEGKTEQELISKLDEMEQLEELEDEMDRLDHILLNENFDLEEQDQELEVEIDDDKCQDTNETKLKKSVSFADNSDTETLEILFKHSDVEPSQEMYCPEKGIRKPSDVYEMFPNLIIGATSILKKSKYINEDFVEVENSFKANKKVLFPTLHEEDLIKTVGVKDIQEKANNTQDKKKCNSTRPMSLFKKKRMQNKK

Summary

Pfam
PF02996   Prefoldin
Interpro
IPR004127   Prefoldin_subunit_alpha        + More
IPR009053   Prefoldin       
Gene 3D

Ontologies

GO

Topology

Length:
479
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0092
Exp number, first 60 AAs:
0.00212
Total prob of N-in:
0.02493
outside
1  -  479
 
 

Population Genetic Test Statistics

Pi
314.268053
Theta
200.059996
Tajima's D
1.581043
CLR
0.071055
CSRT
0.8029598520074
Interpretation
Uncertain
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