Gene

KWMTBOMO02427  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013512

Annotation

PREDICTED:_neuroblastoma-amplified_sequence-like_[Bombyx_mori]

Location

Bomo_Chr5(-):1781844-1785307      View in EpiBrowser

Full name

Neuroblastoma-amplified sequence      

Alternative Name

Neuroblastoma-amplified gene protein homolog

Location in the cell

Cytoplasmic   Reliability : 3.37

CDS

ATGGCCGCCGAGCAATGTGACCAAAAGGAGGCATTGGCGAGTGAAGAAGGTCGACGTGAATTATTCGAGAAGTTCCTTGAGGAGTCCGACACTTGGCAACAGAGGAAGGCTCTGGTCGACGTGCTGAACTGCTGGCCTCCGATTACTTCCAGCGAGTCGGCGAGTCTGCAGTGCGAGTACCTGTACGCGCTGCTGACGAACCCTCTGGACAGCAAGGAGAGCTTGGAGCTCATCAAGGCGCTGCTCAGCCGGCCCGTCCTTAGCGAGCAGGAAATTAAATGGCTGATCGACGACGTCGTCCCGGACGCAGTCGTGAACGCCATCTGGATTCTCTTGCTCAGTAAATATCAACATTCCAAAGAAGAGATACTGAACATATTGCAACAGCACAAGGAAGAAGTTGCGAAACAAGAAATCGACGATGAGCTGGTCGCGGAGTTGCTCCGCAACGACTTGTTCGTGAGTCTGGTCGGCACTCCGCTGTACCCCAAAATGCTCAGCTACATCATCAGCCGGGAGGGCGGCTCCGAGGACGCGCCGTACTCCGTGCCGTGGGCCACGCGAGAGCTGCTGAAGGCCAACTACCTGGCCGAGGCCGGGCACCTCCGTCTCATGGCTGATGGCGTCCCGCCGCCCCTGCGAGGGTTCTCTCAGTCCGTTCTCTATTGTAAGAATATCTTTAAGAAATAA

Protein

MAAEQCDQKEALASEEGRRELFEKFLEESDTWQQRKALVDVLNCWPPITSSESASLQCEYLYALLTNPLDSKESLELIKALLSRPVLSEQEIKWLIDDVVPDAVVNAIWILLLSKYQHSKEEILNILQQHKEEVAKQEIDDELVAELLRNDLFVSLVGTPLYPKMLSYIISREGGSEDAPYSVPWATRELLKANYLAEAGHLRLMADGVPPPLRGFSQSVLYCKNIFKK

Description

Involved in Golgi-to-endoplasmic reticulum (ER) retrograde transport; the function is proposed to depend on its association in the NRZ complex which is believed to play a role in SNARE assembly at the ER (By similarity).

Subunit

Component of the NRZ complex.

Keywords

Coiled coil   Complete proteome   Endoplasmic reticulum   Protein transport   Reference proteome   Repeat   Transport   WD repeat  

Feature

chain  Neuroblastoma-amplified sequence

Uniprot

H9JVE9   A0A2A4JMH6   A0A2W1BDD6   A0A1E1WTL1   A0A194Q4M9   A0A212FIR2   + More
S4P6G8   A0A0L8GAE7   A0A0L8GA97   A0A210Q6V8   A0A162QEA8   A0A0N8AHJ0   A0A0P5UQI9   A0A0P5XMP1   A0A0P5BBN8   A0A0P6JA84   A0A0P5RID4   A0A0P5T3B6   A0A0N8CIV4   A0A0N8DQ35   A0A0P5FBS2   A0A0P5N4N4   A0A0P5PE49   A0A0P6E266   A0A0P5Q9F4   F7AJ11   V4AB70   R7T8S2   E9H0R3   A0A0P5YGX3   A0A0P5YE61   Q5TYW4   A0A0P5A7L8   A0A1B6DSA4   W5UEB5   A0A2D0T1M5   C3Y2C0   A0A3B3SPE2   A0A2I0UL20   W5NI89   K7GA65   K7GA49   A0A2J8V472   F7G1Z4   F7G1Z9   A0A131YVD2   A0A1D5Q3E8   A0A1L8GBP3   I3IVK2   K9IPL1   A0A2C9KR62   H7BZR3   A0A093P9J3   A0A0P5Y316   A0A3B3DQK4   A0A091JAM3   A0A1D5PK79   H3DFW0   A0A3B4DJ64   A0A1D5P365   A0A3P8P8Z5   A0A3P8P8K8   A0A3P8P880   A0A3P9LQ30   A0A3P8P9A2   Q80XK8   A0A3P9CDM3   A0A093HCD6   Q6PGH6   Q6GQV6   G1NML7   Q3UJX6   E9Q411   Q80X24   A0A0A0AJB7   H2MQ52   A0A3Q0G330   A0A1S3JM80   A0A091MRC3   A0A3B3Z8K3   A0A3P8ZLY7   A0A3B4BNR5   A0A1S3KGU9   G3W2R0   H3A3U3   A0A091V4N4   A0A091WDX1   A0A2L2YH20   A0A2J8NLR1  

Pubmed

19121390    28756777    26354079    22118469    23622113    28812685    + More
20431018    23254933    21292972    23594743    23127152    18563158    29240929    17381049    18464734    26830274    17431167    27762356    25186727    15562597    15815621    29451363    15592404    15496914    17554307    15489334    20838655    10349636    11042159    11076861    11217851    12466851    16141073    17242355    19468303    21183079    25463417    25069045    26383154    21709235    9215903    26561354   

EMBL

BABH01036050    BABH01036051    BABH01036052    BABH01036053    BABH01036054    BABH01036055    + More
NWSH01001095    PCG72633.1    KZ150118    PZC73232.1    GDQN01000777    JAT90277.1    KQ459465    KPJ00304.1    AGBW02008342    OWR53625.1    GAIX01005044    JAA87516.1    KQ422986    KOF73824.1    KOF73823.1    NEDP02004772    OWF44470.1    LRGB01000341    KZS19617.1    GDIP01146817    JAJ76585.1    GDIP01113317    JAL90397.1    GDIP01069875    JAM33840.1    GDIP01186712    JAJ36690.1    GDIQ01020565    JAN74172.1    GDIQ01101166    JAL50560.1    GDIP01133965    JAL69749.1    GDIP01127415    JAL76299.1    GDIP01011967    JAM91748.1    GDIP01149518    JAJ73884.1    GDIQ01147101    JAL04625.1    GDIQ01132065    JAL19661.1    GDIQ01068880    JAN25857.1    GDIQ01117709    JAL34017.1    AAMC01114030    AAMC01114031    AAMC01114032    AAMC01114033    AAMC01114034    AAMC01114035    AAMC01114036    AAMC01114037    AAMC01114038    AAMC01114039    KB200521    ESP01249.1    AMQN01014563    AMQN01014564    KB311057    ELT90143.1    GL732581    EFX74704.1    GDIP01058133    JAM45582.1    GDIP01060426    JAM43289.1    BX649472    BX649264    BX649299    BC135054    GDIP01203007    JAJ20395.1    GEDC01008779    JAS28519.1    JT412617    AHH39924.1    GG666480    EEN66010.1    KZ505701    PKU46708.1    AHAT01009097    AHAT01009098    AHAT01009099    AHAT01009100    AHAT01009101    AHAT01009102    AHAT01009103    AGCU01198987    AGCU01198988    AGCU01198989    AGCU01198990    AGCU01198991    AGCU01198992    AGCU01198993    AGCU01198994    AGCU01198995    AGCU01198996    NDHI03003434    PNJ52334.1    AAPN01436104    AAPN01436105    AAPN01436106    AAPN01436107    AAPN01436108    AAPN01436109    AAPN01436110    AAPN01436111    AAPN01436112    AAPN01436113    GEDV01006117    JAP82440.1    JSUE03010259    JSUE03010260    JSUE03010261    JSUE03010262    CM004474    OCT81253.1    AERX01005424    AERX01005425    AERX01005426    AERX01005427    AERX01005428    GABZ01003407    JAA50118.1    AC007738    AC008278    AC008282    AC074184    KL225502    KFW73071.1    GDIP01064628    JAM39087.1    KK501620    KFP16770.1    AADN05000843    BC046406    AAH46406.1    KL217400    KFV77090.1    BC057020    AAH57020.1    BC072598    AAH72598.1    AK146270    BAE27029.1    AC154517    AC159250    CT025539    CT030206    BC051652    AAH51652.1    KL871774    KGL93548.1    KK833705    KFP78461.1    AEFK01036733    AEFK01036734    AEFK01036735    AEFK01036736    AEFK01036737    AEFK01036738    AEFK01036739    AEFK01036740    AEFK01036741    AEFK01036742    AFYH01168741    AFYH01168742    AFYH01168743    AFYH01168744    AFYH01168745    AFYH01168746    AFYH01168747    AFYH01168748    AFYH01168749    AFYH01168750    KL410622    KFQ97953.1    KK735179    KFR12983.1    IAAA01029226    LAA07456.1    NBAG03000227    PNI72710.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000053454    UP000242188    + More
UP000076858    UP000008143    UP000030746    UP000014760    UP000000305    UP000000437    UP000221080    UP000001554    UP000261540    UP000018468    UP000007267    UP000002279    UP000006718    UP000186698    UP000005207    UP000076420    UP000005640    UP000054081    UP000261560    UP000053119    UP000000539    UP000007303    UP000261440    UP000265100    UP000265180    UP000265160    UP000053875    UP000001645    UP000000589    UP000053858    UP000001038    UP000189705    UP000085678    UP000261520    UP000265140    UP000007648    UP000008672    UP000053283    UP000053605   

PRIDE

H9JVE9    Q5TYW4    H7BZR3    E9Q411   

Pfam

PF08314   Sec39        + More
PF15492   Nbas_N
PF00411   Ribosomal_S11

Interpro

IPR029145   NBAS_N        + More
IPR013244   Sec39_domain       
IPR036322   WD40_repeat_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR001971   Ribosomal_S11       
IPR036967   Ribosomal_S11_sf       
IPR001680   WD40_repeat       
IPR011044   Quino_amine_DH_bsu       
IPR016024   ARM-type_fold       

SUPFAM

SSF50978   SSF50978        + More
SSF50969   SSF50969       
SSF48371   SSF48371       

Gene 3D

2.130.10.10     3.30.420.80    

ProteinModelPortal

H9JVE9   A0A2A4JMH6   A0A2W1BDD6   A0A1E1WTL1   A0A194Q4M9   A0A212FIR2   + More
S4P6G8   A0A0L8GAE7   A0A0L8GA97   A0A210Q6V8   A0A162QEA8   A0A0N8AHJ0   A0A0P5UQI9   A0A0P5XMP1   A0A0P5BBN8   A0A0P6JA84   A0A0P5RID4   A0A0P5T3B6   A0A0N8CIV4   A0A0N8DQ35   A0A0P5FBS2   A0A0P5N4N4   A0A0P5PE49   A0A0P6E266   A0A0P5Q9F4   F7AJ11   V4AB70   R7T8S2   E9H0R3   A0A0P5YGX3   A0A0P5YE61   Q5TYW4   A0A0P5A7L8   A0A1B6DSA4   W5UEB5   A0A2D0T1M5   C3Y2C0   A0A3B3SPE2   A0A2I0UL20   W5NI89   K7GA65   K7GA49   A0A2J8V472   F7G1Z4   F7G1Z9   A0A131YVD2   A0A1D5Q3E8   A0A1L8GBP3   I3IVK2   K9IPL1   A0A2C9KR62   H7BZR3   A0A093P9J3   A0A0P5Y316   A0A3B3DQK4   A0A091JAM3   A0A1D5PK79   H3DFW0   A0A3B4DJ64   A0A1D5P365   A0A3P8P8Z5   A0A3P8P8K8   A0A3P8P880   A0A3P9LQ30   A0A3P8P9A2   Q80XK8   A0A3P9CDM3   A0A093HCD6   Q6PGH6   Q6GQV6   G1NML7   Q3UJX6   E9Q411   Q80X24   A0A0A0AJB7   H2MQ52   A0A3Q0G330   A0A1S3JM80   A0A091MRC3   A0A3B3Z8K3   A0A3P8ZLY7   A0A3B4BNR5   A0A1S3KGU9   G3W2R0   H3A3U3   A0A091V4N4   A0A091WDX1   A0A2L2YH20   A0A2J8NLR1  

KEGG

101744793    K20473 neuroblastoma-amplified sequence | (RefSeq) neuroblastoma-amplified sequence-like

GO

GO:0006890   GO:0006412   GO:0003735   GO:0005840   GO:0000184   GO:0043009   GO:2000623   GO:0005783   GO:0015031   GO:0000956   GO:0016021   GO:0000149   GO:0070939  

Subcellular location

Endoplasmic reticulum  

Length:

229

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03253

Exp number, first 60 AAs:

0.0002

Total prob of N-in:

0.26862

outside

1  -  229

 

 

Pi

199.076333

Theta

164.704377

Tajima's D

0.917229

CLR

0.07914

CSRT

0.635418229088546

Interpretation

Uncertain