Silkworm Genome Informatics Database

Gene

KWMTBOMO02410

Annotation

PREDICTED:_uncharacterized_protein_LOC101745080_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr5(+):1513518-1521292 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.888

CDS

ATGACCACTGATAGACAACAGCGCGCTTTGAAGCGGCAAGATTTTGAGACGAACGGAGAGTGTGATCAGCGCAAGCGATGTTCGAAGCCTTCGAGAGAGTACATCTGTCGTAGATGTGGCGGCGACAAAACAGGAGGATTCGTGCCCTGCATTTGTAACTCGCGGCCGCAAGAGGTGAAATTTGAATCCGGCGCATGGTTCCTGAGACAAGTGCAACAAGCGCTCAGCCTCATGCCGTGGTCTATATCGACAGAGAAACTTGAGCAGATTGACGAAGAAAATGATGACCGAGATGGTCCCGGGCCAAGCGAATTGGCTCACAAAGAACTTCGGACTATACGAGAGTTCTTAGAGACGCTGTCAAGAAAGTTAGCCGGTGGACACCTTGAGAGAACTAGGATCGGTCCATTGTACGACCACCCTGCCTATGTACTTATGTTCGAGAGACACCACTCGGCGCTGCGCATCACGCTAACGCAGCTCGCCATCGCGCTGAGAGACGCGCTAACACGTAAGATAGCGTAG

Protein

MTTDRQQRALKRQDFETNGECDQRKRCSKPSREYICRRCGGDKTGGFVPCICNSRPQEVKFESGAWFLRQVQQALSLMPWSISTEKLEQIDEENDDRDGPGPSELAHKELRTIREFLETLSRKLAGGHLERTRIGPLYDHPAYVLMFERHHSALRITLTQLAIALRDALTRKIA

Uniprot

A0A2A4JXA9 A0A2H1VRV2 A0A194Q451 A0A0L7KQX0 A0A0N1PJ99 A0A2W1BH60 + More
A0A1Y1K5I7 A0A1B6EC84 A0A1B6E738 A0A1Y1K094 A0A1Y1K099 A0A1Y1K5J5 A0A1B6EA48 A0A0T6B799 A0A182RZ04 A0A1B6KI04 A0A182KCF2 A0A1B6F7P3

Pubmed

26354079 26227816 28756777 28004739

EMBL

NWSH01000405 PCG76647.1 ODYU01004054 SOQ43537.1 KQ459465 KPJ00318.1 + More
JTDY01006820 KOB65668.1 KQ460393 KPJ15369.1 KZ150214 PZC72140.1 GEZM01096387 JAV54935.1 GEDC01001798 JAS35500.1 GEDC01003562 JAS33736.1 GEZM01096383 GEZM01096379 JAV54939.1 GEZM01096385 GEZM01096380 JAV54942.1 GEZM01096382 GEZM01096377 JAV54945.1 GEDC01002505 JAS34793.1 LJIG01009375 KRT83206.1 GEBQ01028889 JAT11088.1 GECZ01023517 JAS46252.1

Proteomes

UP000218220 UP000053268 UP000037510 UP000053240 UP000075900 UP000075881 + More

Pfam

PF02318 FYVE_2

Interpro

IPR011011   Znf_FYVE_PHD        + More
IPR013083   Znf_RING/FYVE/PHD
IPR041282   FYVE_2

SUPFAM

SSF57903 SSF57903

Gene 3D

3.30.40.10

ProteinModelPortal

A0A2A4JXA9 A0A2H1VRV2 A0A194Q451 A0A0L7KQX0 A0A0N1PJ99 A0A2W1BH60 + More
A0A1Y1K5I7 A0A1B6EC84 A0A1B6E738 A0A1Y1K094 A0A1Y1K099 A0A1Y1K5J5 A0A1B6EA48 A0A0T6B799 A0A182RZ04 A0A1B6KI04 A0A182KCF2 A0A1B6F7P3

KEGG

101745080 no KO assigned | (RefSeq) uncharacterized LOC101745080

GO

GO:0016021 GO:0046872

Length:

174

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01846

Exp number, first 60 AAs:

0

Total prob of N-in:

0.51290

inside

1 - 174

Pi

169.258646

Theta

154.7606

Tajima's D

1.140813

CLR

0.297899

CSRT

0.699115044247788

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics