SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02408
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC105841899?_partial_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.265
 

Sequence

CDS
ATGGATAAGGAGTTGCTAATGGAGGCGGCCGCTGTTGCTGCGTGGGCGCCAAAACCCGCGCGGCTCGCGGACGTGGATGCGGAGGTCGACTGGTTCCGGGGCACCATGGCAAACATTTGTGATGCCGCCATGCCCCGGGTCGGCCCCCGAGCACCACGTGGGGGTGCGTTCTGGTGGTCGCCCGAGATCGCAAGACTCCGCGAGGAGTGCGTGAGGGCGCGCCGCCGGAGCGCACGCCACCGCCACCGCCGTCGTCGCGACGCTACGTTCGCGGAGACGGCGGCCCGGCTGCATGCTGACTGTCGTCAAAAGCAGACGGCGTTGCAGCTGGCCATCGGCGAGGCCAAGAAGCAGAGCATGAAGACTCTCCTGGAGTCGCTCGACGAAGATCCCTGGGGGCGCCCATACAAGATGGTTCGCAGGAAACTGCAACCGTGGGCGCTCCCGGTGACCGAGTGGCTCCAGCCTCGGCAACTGCGGGAAATTGTTGCGGCACTCTTCCCGCCGGCAGCGGAGGGGGACTTTGAGCCCCCCCAGATGGACGCCACGTGGGGCACGCCTCCGCGTCGCCCCAGCGTTCCCGCTGCCGAGGAGCCCCCTCCCCCTATCACGGGGGCGGAGATCCATGCGGCCGTGTCCAGAATGAGGGCGAAGGACGCGGCCCCCGGCCCTGACGGCGTTCACGGCCGGGTCTGGAGCTTGGCCTTCGAGGCCCTAGGGGACCGGCTCGGGGGGCTTTTCGAAGCGTGCCTCGAGTCGGGACGGTTCCCGTCGAAATGGAAGACGGGCAGACTGGTCCTTCTGCGGAAGGAAGGGCGCCCCGCGGACTCACCCGCGGGCTATCGCCCCATCGTGTTGCTGGACGAGGCGGGCAAGATGCTCGAGAGGATCGTCGCGGCCCGCATCGTCCGGCACCTGACCGAGACGGGTCCCGATCTTTCGACGGAGCAGTACGGCTTCAGAGAGGGCCGCTCAACGATCGACGTGATTTTGCGCGTGCGTGCCCTCTCTGATGAGGCCGTCACCAGGGGCGGGGTGGCAACGGCGGTGTCCTTGGACATAAGGAACGCATTCAACACCCTGCCCTGGTCGGTGATCGCGGGGGCGCTGGAGTATCACGGCGTCCCCGCGTACCTCCGCCGGCTGATCGGCTCCTATCTCGAGGACAGGTCGATCGTATGCGTCGGACACGGTGGGGCAGTCTACCGCTTCCCCGTCGAGCGCGGTGTTCCGCAGGGGTCTGTCCTGGGCCCCTTGCTATGGAACATCGGCTACGACTGGGTCCTGCGGGGCGCCCTATGGGGTTCCCTCCCCGGGCTAAGTGTCGTCTGCTATGCTGACGACACGCTGGTCGTAGCCCCGGGGAGGGACTACCGGGAGTCTGCCCGTCTGGCTTGCGCAGGTGTGGCAAGCGTCGTCGCAAGGATCCGACGGTTGGGGCTCGAGGTGGCGCTCGAAAAAACCCAGGCCCTCTTATTTCACGGGCCGGGACGGGCGCCGCCTGCGGATGCCCACCTCGTGATCGGAGGCGTTCGCATCGGGGTCGGGGTGACCGGTCTCAGGTACCTCGGCCTCGAACTGGATGGTCGTTGGAGCTTCCGCGCTCACTTTAAGAAATTGGGCCCTCGGCTGATCGCGACGGCCGGCTCTTTGTGCCGGCTTCTTCCTAACGTCGGGGGTCCCGATGAGGCGGCGCGCCGCCTATACATGGGGGTGGTGCGGTCGATGGCACTGTACGGGGCTCCCGTATGGTGCCACGCCCTGACCCGCAAGAACGTCGCGGCGCTGCGACGTCCGCAGCGCGCGATCGCGATCAGGGCGATCCGAGGATACCGCACCGTCTCCTTCGAGGCGGCGTGCTTGCTCGCCGGGGCGCCACCCTGGGACCTGGAGGCGGAGGCGCTCGCTGCCGATTACAGGTGGCGTAGCGACCTCCGCTCTAGGGGGGAAGGGCACCCCAGCGAAGGTGTAGTTCGAGCGCGGAGGCTCCACTCTCGGCGGTCCGTGCTGGAGGCGTGGTCTCGCCGCTTGGCGAACCCGTCGGCCGGCCTCCGTACCGTCGAGGCGGTCCGCCCGGTTCTCGCGGACTGGGTGGGCCGCGACCGCGGATGCCTCACCTTCCGGCTGACGCAAATGCTTACCGGCCACGGTTGTTTTGGCCGGTACTTGCATAAGATAGCCGGAAGGGAACCGACGGCGCAGTGCCACCACTGCGCGGACCGCGACGAGGAAGACACGGCGGAACATACATTGGCGCGTTGCTCTGGATTCGACGAGCAACGCGCCGCCCTCGTCGCGGTCATAGGAGAGGACCTCTCGCTGCCGCGCGTCGTGGCTACGATGCTCGGCAGCGACGCGTCCTGGAAGGCGATGCTCGACTTCTGCGAGTCCACCATCTCGCAGAAGGAGGCGGCGGAGCGAGAGAGGGAGAGCTCTTCCCTTTCCGCACCGATCCGTCGCCGTCGAGCCGGGGGCCGGAGGCGGGAATACGCCCGTACGTCCCGGCCCCTGTAG
Protein
MDKELLMEAAAVAAWAPKPARLADVDAEVDWFRGTMANICDAAMPRVGPRAPRGGAFWWSPEIARLREECVRARRRSARHRHRRRRDATFAETAARLHADCRQKQTALQLAIGEAKKQSMKTLLESLDEDPWGRPYKMVRRKLQPWALPVTEWLQPRQLREIVAALFPPAAEGDFEPPQMDATWGTPPRRPSVPAAEEPPPPITGAEIHAAVSRMRAKDAAPGPDGVHGRVWSLAFEALGDRLGGLFEACLESGRFPSKWKTGRLVLLRKEGRPADSPAGYRPIVLLDEAGKMLERIVAARIVRHLTETGPDLSTEQYGFREGRSTIDVILRVRALSDEAVTRGGVATAVSLDIRNAFNTLPWSVIAGALEYHGVPAYLRRLIGSYLEDRSIVCVGHGGAVYRFPVERGVPQGSVLGPLLWNIGYDWVLRGALWGSLPGLSVVCYADDTLVVAPGRDYRESARLACAGVASVVARIRRLGLEVALEKTQALLFHGPGRAPPADAHLVIGGVRIGVGVTGLRYLGLELDGRWSFRAHFKKLGPRLIATAGSLCRLLPNVGGPDEAARRLYMGVVRSMALYGAPVWCHALTRKNVAALRRPQRAIAIRAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRSDLRSRGEGHPSEGVVRARRLHSRRSVLEAWSRRLANPSAGLRTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGCFGRYLHKIAGREPTAQCHHCADRDEEDTAEHTLARCSGFDEQRAALVAVIGEDLSLPRVVATMLGSDASWKAMLDFCESTISQKEAAERERESSSLSAPIRRRRAGGRRREYARTSRPL

Summary

Similarity
Belongs to the AB hydrolase superfamily. Lipase family.
EMBL
AB090825    BAC57926.1    AB078931    BAC06456.1    AB078929    BAC06452.1    + More
AB078930    BAC06454.1    AB078935    BAC06462.1    LBMM01012027    KMQ86470.1    KZ149896    PZC78733.1    D85594    BAA19776.1    LBMM01006671    KMQ90407.1    KQ460685    KPJ12887.1    LBMM01006954    KMQ90166.1    LBMM01008448    KMQ88867.1    LBMM01007036    KMQ90099.1    LBMM01004272    KMQ92618.1    LBMM01003988    KMQ92922.1    LBMM01007425    KMQ89740.1    LBMM01015025    KMQ84953.1    LBMM01006657    KMQ90417.1    LBMM01004505    KMQ92346.1    LBMM01002480    KMQ94776.1    LBMM01008422    KMQ88894.1    LBMM01002052    KMQ95336.1    LBMM01004634    KMQ92224.1    LBMM01012412    KMQ86235.1    LBMM01015018    KMQ84954.1    LBMM01008278    KMQ89009.1    LBMM01005733    KMQ91252.1    LBMM01005948    KMQ91066.1    GGMR01000779    MBY13398.1    LBMM01014122    KMQ85315.1    ABLF02015311    ABLF02015320    ABLF02034009    ABLF02043484    ABLF02011238    LBMM01005474    KMQ91485.1    GGMR01015159    MBY27778.1    LBMM01003245    KMQ93755.1    LBMM01015285    KMQ84870.1    LBMM01004262    KMQ92649.1    LBMM01004261    KMQ92650.1    GGMR01014195    MBY26814.1    LBMM01008445    KMQ88871.1    LBMM01005216    KMQ91703.1    ABLF02041886    KU543683    AMS38371.1    KMQ94772.1    GFXV01003903    MBW15708.1    LBMM01005465    KMQ91492.1    GAMC01020517    JAB86038.1    GAKP01002292    JAC56660.1    GAMC01020519    GAMC01020515    JAB86040.1    ABLF02034925    AJ278684    CAB99192.1    LBMM01006977    KMQ90149.1    GGMR01004600    MBY17219.1    ABLF02041557    ABLF02018808    KQ971309    EEZ99146.1    ABLF02023257    LBMM01013668    KMQ85535.1    GFXV01002090    MBW13895.1    ABLF02021100    KQ972226    KYB24577.1    GGMR01006838    MBY19457.1    ABLF02007989    GGMR01011682    MBY24301.1    ABLF02004674    ABLF02004675    ABLF02004676    ABLF02011637    GGFK01005660    MBW38981.1    GALA01001776    JAA93076.1    GGFJ01001165    MBW50306.1    ABLF02059310    GGFJ01001164    MBW50305.1    ABLF02014378    AB593321    BAK38639.1    GALA01001777    JAA93075.1    GGMR01012748    MBY25367.1    GALA01000302    JAA94550.1    LBMM01008226    KMQ89040.1    GGFJ01001166    MBW50307.1    QOIP01000014    RLU15074.1    GGFM01001554    MBW22305.1   
Pfam
PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1
PF01553   Acyltransferase
PF03372   Exo_endo_phos
PF00098   zf-CCHC
PF00151   Lipase
Interpro
IPR000477   RT_dom        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR002123   Plipid/glycerol_acylTrfase       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR029058   AB_hydrolase       
IPR013818   Lipase/vitellogenin       
IPR000734   TAG_lipase       
SUPFAM
SSF56219   SSF56219        + More
SSF57756   SSF57756       
SSF53474   SSF53474       
Gene 3D
PDB
6AR3     E-value=0.000416713,     Score=107

Ontologies

Topology

Subcellular location
Secreted  
Length:
837
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.05069
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00009
outside
1  -  837
 
 

Population Genetic Test Statistics

Pi
35.312129
Theta
2.490157
Tajima's D
1.626364
CLR
0.992743
CSRT
0.847757612119394
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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