Silkworm Genome Informatics Database

Gene

KWMTBOMO02395

Pre Gene Modal

BGIBMGA013535

Annotation

PREDICTED:_cysteine-rich_protein_2-binding_protein_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr5(-):1065430-1083591 View in EpiBrowser

Location in the cell

Nuclear Reliability : 1.468 PlasmaMembrane Reliability : 1.303

CDS

ATGACAACGAACTGCGTATATTGTAACGAAGAAGAAGATAAACAACTACAACCGGGCTTAGTATGCGAGAGCTGTTTCTGTTTCGTGCATTTAAAATGTTTGCGCAATGCTGGAACTCCTGGCGATTTCGTATGCGATGTATTCTTCGATTTTACATGCGAGGATTGCTCTTCCGATAAACTTGAAGTCTTTGTCAGGAACAAATTTCCTTGGGTAAATGTTATATACTTGACTCTAAATCATTTAAACTGTCACTCATACGGGATCAGTAACAGAGGTTATTTCCACTACAAAACTCATATTTGTTCATTCATAGATAGAAATTGGCAGGCACTGTTTGGATCAAATTCGAAACAGAAAAAAAATTGGATTGGCACTATAGCAGGAGTCTTATCTATATATAATAAGCTAGTCTTCAAATCTGGTTCGGCAGATCTCGGAGAAATGGGCTGGTGGAAATTGCAGCATAACTTCTCGCCTGCTGTGGCAGCACATATAATTCAGGAGGTTGCTCGAGATAAGCCACTGGGAATGTCAAGGAATCAACTGACACTTGATAACACCTTTTTTATCAGCAGGATCACAAACATGGGCTACAAAGATTACATAATTGAAGAGAAAGATTCAGAGATGAGCGCACCAGCGCCTAATAAGAAAAGACGCCTGGAGCCACCAGAACCAAGTGTCTCCGACTTCCAGGAGCGAGATTCTAATAGCAGGTTGGATAATTTAGAAGAATGCGTCTACGAAGACAGCTACAACATGGACGCAACTGAGGGCTCCTACCCAGAACTAGAGTTCAAAGAGTTCGACTTCACGCCGACAAGCCAAATACCGAATATGCAGAGTGACACCTCAAGCGTAACCTCCTTCCAGCATACGCTCTTCTTCTACGACTCTGACTCCCGAAGCGGCTCAGAACAAGAAAAGAAACTGGAAACAAAACCAAAAAAGACAGAAGAGAAACCAGTAAGAAGAGAATCTCTTTTCTCTACCGAACTCAATTCAGAGGATCTGCCGTGGACGACGACTCCTCGCGCGGAGACGAACGTGGTGGAAATGACTCAATACGAAGAAGTACAGCTCTTGAAGCAGATCGAAGGGCTGGTGACTAAAGTAAAGGACTCTGCAAGACGAGCCTCTCTTCACAGGCTGAAGGCAAAACTGACTCTGCGCAGGCTGAAGAGACACAAGCATTTACCTATATTCACTTTTGACAAGACGGTAAAGTTGCTGAGCGGTCACGCCGCTGAGGATCCGCGGCAGGTCAACAACGTCGAGAGAGTGCTGGACAGGTTCCAGAGATCGTTCCTTATGGATAACCTCTGCGGTACTATAGCAAGTACAACCCACGGAACCCTCCTGCTGTCGCGCATGGAAGCCCTGCCCTTCAGGTCTCCGTACTCCGGAGTCACCCTCAAGCCTTACATAAGACGGGACACCGAAACCTGCACCACCTGGATGAAGCTAATGGACGAGCTGCTGAGGAAAACTCACAGGCACATAAAAGACTACGAGCCACCCGCACGCATGTCCATTGACTACTCCTACGTCCGTCCGCAGCACATCGCTGCAGTCAATAATTTATGTGCCCAATTCTTCTGGCCCGGGATAGACTTAACTGAGGCCCTGCAGTACCCAGAGTTCAGCTGCGTAGTGACGTACGGACGCCTGGTCGTGGGCTGTGCCTTCCTGGTGCCGGACGCGGGACATTCCACCGCGTACATCTCCTTCGTGCTCACCAGGCCGGAGTGGGGCAGGGCCGGCATAGCTACATTCATGCTGTACCATCTACTTCAGACTTGCACGGGCCAAGATATCACACTGCATGTGTCACCAACAAATCCAGCTATATTTTTATATCAAAAATTTGGCTTCAAAGTTGAAGAACTTATACAAGACTTTTATGAGAAGTACTACGACATCGAATACAAGGGATGCCGGCACGCGCTCTTTCTTCGACTTGTCAGATAA

Protein

MTTNCVYCNEEEDKQLQPGLVCESCFCFVHLKCLRNAGTPGDFVCDVFFDFTCEDCSSDKLEVFVRNKFPWVNVIYLTLNHLNCHSYGISNRGYFHYKTHICSFIDRNWQALFGSNSKQKKNWIGTIAGVLSIYNKLVFKSGSADLGEMGWWKLQHNFSPAVAAHIIQEVARDKPLGMSRNQLTLDNTFFISRITNMGYKDYIIEEKDSEMSAPAPNKKRRLEPPEPSVSDFQERDSNSRLDNLEECVYEDSYNMDATEGSYPELEFKEFDFTPTSQIPNMQSDTSSVTSFQHTLFFYDSDSRSGSEQEKKLETKPKKTEEKPVRRESLFSTELNSEDLPWTTTPRAETNVVEMTQYEEVQLLKQIEGLVTKVKDSARRASLHRLKAKLTLRRLKRHKHLPIFTFDKTVKLLSGHAAEDPRQVNNVERVLDRFQRSFLMDNLCGTIASTTHGTLLLSRMEALPFRSPYSGVTLKPYIRRDTETCTTWMKLMDELLRKTHRHIKDYEPPARMSIDYSYVRPQHIAAVNNLCAQFFWPGIDLTEALQYPEFSCVVTYGRLVVGCAFLVPDAGHSTAYISFVLTRPEWGRAGIATFMLYHLLQTCTGQDITLHVSPTNPAIFLYQKFGFKVEELIQDFYEKYYDIEYKGCRHALFLRLVR

Uniprot

H9JVH2 A0A2H1VYC1 A0A2A4JVF5 A0A212ELN7 A0A0N1IGR6 A0A0L7R1V3 + More
A0A2A3EKZ0 A0A026WE22 E2BPS0 A0A0C9PR60 K7IQG6

Pubmed

19121390 22118469 26354079 24508170 20798317 20075255 + More

EMBL

BABH01036153 BABH01036154 BABH01036155 BABH01036156 ODYU01005208 SOQ45839.1 + More
NWSH01000594 PCG75463.1 AGBW02014024 OWR42387.1 KQ460731 KPJ12645.1 KQ414667 KOC64829.1 KZ288229 PBC31681.1 KK107261 EZA53926.1 GL449658 EFN82271.1 GBYB01003728 GBYB01003729 JAG73495.1 JAG73496.1

Proteomes

UP000005204 UP000218220 UP000007151 UP000053240 UP000053825 UP000242457 + More
UP000053097 UP000008237 UP000002358

PRIDE

H9JVH2

Pfam

PF00583   Acetyltransf_1        + More
PF05577   Peptidase_S28
PF13673   Acetyltransf_10

Interpro

IPR037829   KAT14        + More
IPR019786   Zinc_finger_PHD-type_CS
IPR016181   Acyl_CoA_acyltransferase
IPR029058   AB_hydrolase
IPR008758   Peptidase_S28
IPR001965   Znf_PHD
IPR042269   Ser_carbopepase_S28_SKS
IPR011011   Znf_FYVE_PHD
IPR000182   GNAT_dom

SUPFAM

SSF55729   SSF55729        + More
SSF53474   SSF53474
SSF57903   SSF57903

Gene 3D

1.20.120.980 3.40.50.1820

ProteinModelPortal

H9JVH2 A0A2H1VYC1 A0A2A4JVF5 A0A212ELN7 A0A0N1IGR6 A0A0L7R1V3 + More
A0A2A3EKZ0 A0A026WE22 E2BPS0 A0A0C9PR60 K7IQG6

PDB

2PSW E-value=0.00132609, Score=101

KEGG

101743975 no KO assigned | (RefSeq) cysteine-rich protein 2-binding protein

GO

GO:0046872 GO:0008236 GO:0005671 GO:0008080 GO:0051082 GO:0020037 GO:0004674 GO:0007165 GO:0005488 GO:0006289 GO:0004518 GO:0006281 GO:0048384

PANTHER

PTHR20916:SF0

Length:

657

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.420080000000001

Exp number, first 60 AAs:

0.0014

Total prob of N-in:

0.02043

outside

1 - 657

Pi

208.596615

Theta

180.226832

Tajima's D

-2.01907

CLR

3.419751

CSRT

0.0120993950302485

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics