Gene

KWMTBOMO02390

Annotation

PREDICTED:_mutS_protein_homolog_5-like_[Amyelois_transitella]

Location

Bomo_Chr5(+):990664-992124      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.994

CDS

ATGCAGCATCCGAGCAGGGATATAGCGGAGTTGCGCCGCCGCCAAGAAGTCGTGGCCTACTTCTTACGATCACAGAATGATCCTTTAATGAGGAATATCTGTTCTGCGCTAAGGTTCATTAGGAATGTTAATACGCTGTATAACGCGGTGCTGATATGCGAGATGTGTGAGAACGCCGGAAAATCCAGTTCTTTTTTAGAGCAGCTTGCCTCATGCGATAATAAGAAACTTTATGAGATGGCCCTATACATGAATCGCATTATAGACTTCGATCAGTCTAAAACTGAAGGAAAGTTCACTGTAAAATCCGGCGTGGATCCTGAATTAGATCGAAGTAAGTATTATGAATTTGTACATATGTATGTAATTCCTCAAGATTTTCTATGTATCTCTTGA

Protein

MQHPSRDIAELRRRQEVVAYFLRSQNDPLMRNICSALRFIRNVNTLYNAVLICEMCENAGKSSSFLEQLASCDNKKLYEMALYMNRIIDFDQSKTEGKFTVKSGVDPELDRSKYYEFVHMYVIPQDFLCIS

Uniprot

A0A2H1WF92   A0A0L7KSI4   A0A2A4JH95   A0A0N0PC03   A0A146PCN1   A0A3M6UXS0   + More
A0A3P8UH54   A0A1B6G0S2   E0VH19   A0A146YV20   A0A146YWX9   A0A2B4SNF7   A0A2J7PJ84   A0A287A489   A0A3B3XQZ1   A0A087YG51   A0A3B3XQX1   A0A1S3QLF1   A0A315WBZ4   A0A3P9PXH0   A0A3P9PX29   A0A2I4BTG0   A0A3B3TXS7   L9KL48   A0A1S3IM19   A0A3B5N002   A0A2U9AYC4   A0A2U9AYD9   A0A1B6CQJ5   A0A2D0SW95   V9KW58   A0A1A6G2W5   A0A1B6E3S8   A0A3B5B9S0   A0A0P7WT52   A0A1W4YX02   A0A3P8ZTH7   A0A210PVY1   G3P3K3   A0A3B4GUF4   A0A3P9B923   A0A3P8P4D8   A0A3B3SSG7   I3JFQ1   A0A3P8ZTE9   A0A0C2C7B7   M4AF55   A0A091UUP9   A0A3B4BAL3   K7F053   A0A093CW40   H2T542   A0A1A8C3W8   A0A3P8RUS4   A0A091X187   A0A3B4T799   A0A3B4T6Z8   A0A091RC36   A0A091P9R4   A0A091M8I5   R0KF26   E7F6L5   A0A091G5I4   X1WGV2   A0A0L8GVI6   A0A0L8GVZ0   A0A3B4XPR8   A0A0N0U6R9   A0A087R6E4   A0A093RCP4   A0A091Q4V5   A0A091U575   A0A2I0MUJ1   A0A087TCW0   A0A0A0A5H8   A0A1A7ZE46   A0A093IE51   A0A093NHP7   A0A1A8AJJ1   H2LZA0   A0A1A8NGB3   A0A1X7UDR7   T1ITD3   A0A151M3E2   A0A1V4JLK5   G3VWQ2   A0A1U7S455   A0A3B3D2Y3   A0A2Y9EC45   H0UUX2   M3W2B2   A0A291S6V4   A0A091TIR9   A0A1A8QLR5   A0A368H5N1  

Pubmed

26227816    26354079    30382153    24487278    20566863    29703783    + More
23385571    24402279    25069045    28812685    25186727    29240929    23542700    25463417    17381049    21551351    23594743    23371554    17554307    22293439    21709235    29451363    21993624    17975172    28992199   

EMBL

ODYU01008277    SOQ51721.1    JTDY01006446    KOB66004.1    NWSH01001581    PCG70800.1    + More
KQ460731    KPJ12650.1    GCES01144621    JAQ41701.1    RCHS01000531    RMX58389.1    GECZ01013749    JAS56020.1    DS235157    EEB12675.1    GCES01028387    JAR57936.1    GCES01028386    JAR57937.1    LSMT01000056    PFX30047.1    NEVH01024950    PNF16373.1    AEMK02000053    AYCK01006477    NHOQ01000034    PWA33565.1    KB320852    ELW61867.1    CP026243    AWO96616.1    AWO96617.1    GEDC01021499    JAS15799.1    JW870427    AFP02945.1    LZPO01107916    OBS60140.1    GEDC01004718    JAS32580.1    JARO02006617    KPP65000.1    NEDP02005458    OWF40626.1    AERX01025173    KN772147    KIH45542.1    KL410062    KFQ93670.1    AGCU01055945    KL474402    KFV20075.1    HADZ01010328    SBP74269.1    KK734375    KFR07341.1    KK813311    KFQ37076.1    KK655140    KFQ04385.1    KK524969    KFP67796.1    KB742432    EOB08672.1    CR854893    CU695006    KL447830    KFO77640.1    KQ420166    KOF81071.1    KOF81072.1    KQ435719    KOX78802.1    KL226140    KFM09048.1    KL439558    KFW93842.1    KK686991    KFQ14960.1    KK418529    KFQ85939.1    AKCR02000002    PKK33333.1    KK114637    KFM62949.1    KL870806    KGL89306.1    HADY01002273    SBP40758.1    KK586012    KFV97048.1    KL224787    KFW63646.1    HADY01016368    SBP54853.1    HAEH01002034    SBR68105.1    JH431477    AKHW03006769    KYO19006.1    LSYS01006902    OPJ73063.1    AEFK01165534    AAKN02021589    AANG04003556    MF432998    ATL75349.1    KK454712    KFQ75666.1    HAEG01013243    SBR94422.1    JOJR01000010    RCN51902.1   

Proteomes

UP000037510    UP000218220    UP000053240    UP000275408    UP000265120    UP000009046    + More
UP000225706    UP000235965    UP000008227    UP000261480    UP000028760    UP000087266    UP000242638    UP000192220    UP000261500    UP000011518    UP000085678    UP000261380    UP000246464    UP000221080    UP000092124    UP000261400    UP000034805    UP000192224    UP000265140    UP000242188    UP000007635    UP000261460    UP000265160    UP000265100    UP000261540    UP000005207    UP000002852    UP000053283    UP000261520    UP000007267    UP000005226    UP000265080    UP000053605    UP000261420    UP000000437    UP000053760    UP000053454    UP000261360    UP000053105    UP000053286    UP000053872    UP000054359    UP000053858    UP000054081    UP000001038    UP000007879    UP000050525    UP000190648    UP000007648    UP000189705    UP000261560    UP000248480    UP000005447    UP000011712    UP000252519   

Pfam

PF01146   Caveolin        + More
PF05192   MutS_III
PF00488   MutS_V
PF05190   MutS_IV

Interpro

IPR001612   Caveolin        + More
IPR027417   P-loop_NTPase       
IPR036187   DNA_mismatch_repair_MutS_sf       
IPR007696   DNA_mismatch_repair_MutS_core       
IPR000432   DNA_mismatch_repair_MutS_C       
IPR017261   DNA_mismatch_repair_MutS/MSH       
IPR007861   DNA_mismatch_repair_MutS_clamp       
IPR011184   DNA_mismatch_repair_Msh2       
IPR036678   MutS_con_dom_sf       

SUPFAM

SSF48334   SSF48334        + More
SSF52540   SSF52540       
SSF53150   SSF53150       

ProteinModelPortal

A0A2H1WF92   A0A0L7KSI4   A0A2A4JH95   A0A0N0PC03   A0A146PCN1   A0A3M6UXS0   + More
A0A3P8UH54   A0A1B6G0S2   E0VH19   A0A146YV20   A0A146YWX9   A0A2B4SNF7   A0A2J7PJ84   A0A287A489   A0A3B3XQZ1   A0A087YG51   A0A3B3XQX1   A0A1S3QLF1   A0A315WBZ4   A0A3P9PXH0   A0A3P9PX29   A0A2I4BTG0   A0A3B3TXS7   L9KL48   A0A1S3IM19   A0A3B5N002   A0A2U9AYC4   A0A2U9AYD9   A0A1B6CQJ5   A0A2D0SW95   V9KW58   A0A1A6G2W5   A0A1B6E3S8   A0A3B5B9S0   A0A0P7WT52   A0A1W4YX02   A0A3P8ZTH7   A0A210PVY1   G3P3K3   A0A3B4GUF4   A0A3P9B923   A0A3P8P4D8   A0A3B3SSG7   I3JFQ1   A0A3P8ZTE9   A0A0C2C7B7   M4AF55   A0A091UUP9   A0A3B4BAL3   K7F053   A0A093CW40   H2T542   A0A1A8C3W8   A0A3P8RUS4   A0A091X187   A0A3B4T799   A0A3B4T6Z8   A0A091RC36   A0A091P9R4   A0A091M8I5   R0KF26   E7F6L5   A0A091G5I4   X1WGV2   A0A0L8GVI6   A0A0L8GVZ0   A0A3B4XPR8   A0A0N0U6R9   A0A087R6E4   A0A093RCP4   A0A091Q4V5   A0A091U575   A0A2I0MUJ1   A0A087TCW0   A0A0A0A5H8   A0A1A7ZE46   A0A093IE51   A0A093NHP7   A0A1A8AJJ1   H2LZA0   A0A1A8NGB3   A0A1X7UDR7   T1ITD3   A0A151M3E2   A0A1V4JLK5   G3VWQ2   A0A1U7S455   A0A3B3D2Y3   A0A2Y9EC45   H0UUX2   M3W2B2   A0A291S6V4   A0A091TIR9   A0A1A8QLR5   A0A368H5N1  

KEGG

NA   

GO

GO:0005524   GO:0030983   GO:0006298   GO:0070836   GO:0016021   GO:0032300   GO:0008094   GO:0007131   GO:0004674   GO:0007165   GO:0005488   GO:0006289   GO:0004518   GO:0006281   GO:0048384  

Length:

131

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00514

Exp number, first 60 AAs:

0.00507

Total prob of N-in:

0.21953

outside

1  -  131

 

 

Pi

148.397757

Theta

163.159336

Tajima's D

0.159416

CLR

0.913285

CSRT

0.415279236038198

Interpretation

Uncertain