SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02380
Pre Gene Modal
BGIBMGA013478
Annotation
HPO_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.117
 

Sequence

CDS
ATGACGGAAACCTCATCAAAAAGTGAATTAAAGAAGTTATCAGAGGAGAGTTTGACGCGGCAACCAGAGGAGGTATTTGATATAATATGCAAACTAGGCGAAGGTTCATACGGAAGTGTTTACAAGGCGTTACACAAAGAAAGCGGACAAGTGCTTGCTATAAAGCAGGTACCTGTGGATACAGACCTGCAGGAGATCATAAAGGAGATATCAATAATGCAGCAGTGCGACAGTCCTTACGTCGTCAAGTATTACGGGAGCTACTTCAAAAATACCGATCTGTGGATCGTGATGGAGTACTGCGGGGCGGGCTCGGTGTCGGACATAATGCGGCTGCGCAAGAAGACTCTGTCGGAAGACGAGATAGCGACCATCCTCTGCGACACGCTCAAGGGCCTGGAGTATCTGCACCGGCGGAGGAAGATCCACCGGGACATCAAGGCCGGGAACATCCTCTTGAACACCGAGGGACACGCCAAACTGGCGGACTTCGGGGTCGCCGGGCAGCTGACCGTGAGTTCTTTTTTTTATTGCTTAGATGGGTGCACGAGCTCACAACCCATCTAG
Protein
MTETSSKSELKKLSEESLTRQPEEVFDIICKLGEGSYGSVYKALHKESGQVLAIKQVPVDTDLQEIIKEISIMQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHRRRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTVSSFFYCLDGCTSSQPI

Summary

EMBL
GAIX01000986    JAA91574.1    AB378070    BAH36933.1    NWSH01000630    PCG75162.1    + More
PCG75158.1    PCG75165.1    KF904333    AHJ25996.1    EU527369    ACB41090.1    BABH01036209    BABH01036210    BABH01036211    BABH01036212    KP735934    AKZ66620.1    PCG75164.1    KZ150157    PZC72766.1    PCG75161.1    KK855655    PTY23427.1    AGBW02012923    OWR44210.1    GEDC01002862    JAS34436.1    GEDC01000946    JAS36352.1    GEDC01029140    JAS08158.1    GECU01020813    GECU01015155    GECU01008424    GECU01004514    GECU01003832    JAS86893.1    JAS92551.1    JAS99282.1    JAT03193.1    JAT03875.1    GBHO01019821    GBRD01011262    GDHC01015342    JAG23783.1    JAG54562.1    JAQ03287.1    GEBQ01014220    JAT25757.1    GBGD01001178    JAC87711.1    GBBI01002329    JAC16383.1    GECL01000935    JAP05189.1    KQ459465    KPJ00350.1    GECZ01001300    JAS68469.1    ACPB03004826    GEBQ01009209    GEBQ01000429    JAT30768.1    JAT39548.1    KQ434806    KZC06150.1    AFFK01014944    PCG75159.1    LJIG01009286    KRT83383.1    GBYB01003572    JAG73339.1    KQ460401    KPJ14951.1    GL764195    EFZ18201.1    HF969251    CCX34980.1    PYGN01001295    PSN35920.1    GGMS01009474    MBY78677.1    QOIP01000012    RLU16340.1    GFXV01007664    MBW19469.1    KQ971307    EFA11019.1    GFXV01004277    MBW16082.1    GFWV01002183    MAA26913.1    ABLF02030673    GEZM01092715    JAV56489.1    GFXV01000695    MBW12500.1    KZ288310    PBC28575.1    KQ414583    KOC70708.1    ADTU01014740    GFDL01007948    JAV27097.1    KQ981864    KYN34306.1    KB632384    ERL94311.1    GL888818    EGI57844.1    KQ976662    KYM78487.1    KQ979568    KYN20829.1    KQ977754    KYN00067.1    APGK01047174    KB741077    ENN74177.1    DS235886    EEB20471.1    GDIP01227078    JAI96323.1    AXCM01004994    GEDV01000390    JAP88167.1    DS231814    EDS31714.1    GFWV01009346    MAA34075.1    KK116295    KFM67355.1    GFJQ02000849    JAW06121.1    GFDL01008013    JAV27032.1    JXUM01094626    JXUM01094627    KQ564141    KXJ72692.1    GGLE01004348    MBY08474.1    CH477395    EAT41841.1    GFPF01011664    MAA22810.1    AXCN02000400    GL732545    EFX80950.1    ABJB010302342    ABJB010418094    ABJB010501463    ABJB010677184    ABJB010911009    ABJB010998423    ABJB011061190    ABJB011071678    DS866317    EEC14349.1    ATLV01020271    KE525297    KFB44978.1    APCN01000070    AAAB01008960    EAA11663.5    LJIJ01000561    ODM96219.1    GDIQ01078002    JAN16735.1    GDIP01144171    JAJ79231.1    GACK01005056    JAA59978.1    GACK01005059    JAA59975.1    GEFH01002572    JAP66009.1    GEFM01004854    JAP70942.1    GDIP01214120    GDIQ01209985    GDIQ01190857    GDIQ01101541    GDIQ01070851    LRGB01000868    JAJ09282.1    JAN23886.1    KZS15726.1    CVRI01000057    CRL02512.1   
Pfam
PF00069   Pkinase        + More
PF11629   Mst1_SARAH
Interpro
IPR017441   Protein_kinase_ATP_BS        + More
IPR011009   Kinase-like_dom_sf       
IPR000719   Prot_kinase_dom       
IPR001245   Ser-Thr/Tyr_kinase_cat_dom       
IPR011524   SARAH_dom       
IPR024205   Mst1_SARAH_domain       
IPR002048   EF_hand_dom       
SUPFAM
SSF56112   SSF56112       
PDB
5DH3     E-value=7.62774e-78,     Score=735

Ontologies

Topology

Length:
188
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03673
Exp number, first 60 AAs:
0
Total prob of N-in:
0.10341
outside
1  -  188
 
 

Population Genetic Test Statistics

Pi
239.25413
Theta
167.9947
Tajima's D
0.68859
CLR
1.149419
CSRT
0.566521673916304
Interpretation
Uncertain
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