Gene

KWMTBOMO02376  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013545

Annotation

19.5_kDa_heat_shock_protein_[Bombyx_mori]

Location

Bomo_Chr5(-):642598-643233      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.997 Mitochondrial   Reliability : 1.672

CDS

ATGTCGCTTGTACCGTACTGGCTACGACACTTGAGGAATCTGGCGTACAGGGATCCGATTGCTAGAGCATTTGAAGATCCTTTCTCCGTCTTCTCCCGGGACCCTTTCTTCCGCGATCCGATCAAGTACATCAGGCAAGCCACCTCACCAATTGAAGACAGTCATGGCATCGAAGGAGTATACTCAGATTCAGAGATCAAAGTTGACGGCAAGAAAGTTGAAGTTCACCTGGATGTGCAGAATTTCACCCCAGAGCAAATTCAAGTGAAAACTGTTGGTAACGAAATTATGATTGAGGGCAAGAAAGAGATAAAGAGAGAAGACGGCTGGACGAGGAGTCACTTCGAGAGAAGGTTCCTTCTTCCTGAAGGTTTCCCGCCGGAACGAGTAGAGTGTCACCTGGATAAAGGGAAGCTGAAGCTTATCGCCTTTAGAGCTGAACCGCTGCAGGAGAGGGCGGTGCCAATTCAGGAGAAATCTGTAAACAGTGAGCAAACAAAGTGA

Protein

MSLVPYWLRHLRNLAYRDPIARAFEDPFSVFSRDPFFRDPIKYIRQATSPIEDSHGIEGVYSDSEIKVDGKKVEVHLDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGWTRSHFERRFLLPEGFPPERVECHLDKGKLKLIAFRAEPLQERAVPIQEKSVNSEQTK

Similarity

Belongs to the small heat shock protein (HSP20) family.

Uniprot

H9JVI2   D2J4T8   A0A2H4G807   A0A385PJZ7   A0A194Q5S4   A0A212ERS5   + More
S4PI12   A0A2H1WVH0   A0A2H1WX86   A0A2A4J8P0   A0A0L7LMZ6   A0A2D1CRP5   A0A0N0PB63   A0A2H4LI79   A0A075BRW2   A0A222NUL1   A0A0K0XR01   A0A0A7BZ72   H9J540   A0A2W1BH28   Q1AMF5   A0A222NUL2   A0A2A4K9P8   A0A2H1WKW0   F1C928   A0A194Q5N9   A0A0A7BZ27   A0A0K0XQY0   A0A0A7BZF0   A0A0L7L8L1   A0A0N1PFQ5   Q1HAT5   A0A2H4G806   A0A1W4WVX2   E2F399   A0A1E1W5U5   A0A2H1W1Y8   A0A2R5LGJ5   A0A2H4LHL7   U5QB76   A0A2A4J9J4   T1ITY9   A0A0K0XR50   A0A2A4JVR5   A0A1D2AIL6  

Pubmed

19121390    26354079    22118469    23622113    26227816    28756777    + More
28755305    26196395    24947609    21510953   

EMBL

BABH01040486    GQ884144    ACZ51258.1    KU522478    APX61064.1    MG816463    + More
AYA93247.1    KQ459465    KPJ00355.1    AGBW02012923    OWR44206.1    GAIX01000309    JAA92251.1    ODYU01011364    SOQ57065.1    ODYU01011703    SOQ57612.1    NWSH01002372    PCG68445.1    JTDY01000581    KOB76586.1    KX977583    ATN45242.1    KQ461134    KPJ08859.1    KX845558    KZ150157    ATB54989.1    PZC72762.1    KC689794    AGQ42772.1    KX958474    ASQ43190.1    KP843897    AKS40076.1    KJ461923    AHW45925.1    BABH01042227    KZ150133    PZC73025.1    DQ063591    AAZ14792.1    KX958479    ASQ43195.1    NWSH01000008    PCG80951.1    ODYU01009326    SOQ53668.1    HQ219475    ADX96000.1    KQ459460    KPJ00669.1    KJ461920    AHW45922.1    KP843906    AKS40085.1    KJ461916    AHW45918.1    JTDY01002346    KOB71621.1    KQ460891    KPJ10838.1    JX491641    KC710020    AB244517    AGC23337.1    AGM90553.1    BAE94664.1    KU522480    APX61066.1    HM046615    ADK55522.1    GDQN01008714    JAT82340.1    ODYU01005718    SOQ46842.1    GGLE01004520    MBY08646.1    KX845562    KZ150055    ATB54993.1    PZC74337.1    KF251046    AGY56063.1    NWSH01002265    PCG68755.1    JH431506    KP843903    AKS40082.1    NWSH01000548    PCG75724.1    GETE01000577    JAT79044.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000218220    UP000037510    UP000053240    + More
UP000192223   

PRIDE

H9JVI2    D2J4T8    H9J540   

Pfam

PF00011   HSP20

Interpro

IPR008978   HSP20-like_chaperone        + More
IPR001436   Alpha-crystallin/HSP       
IPR002068   A-crystallin/Hsp20_dom       

SUPFAM

SSF49764   SSF49764       

Gene 3D

2.60.40.790    

ProteinModelPortal

H9JVI2   D2J4T8   A0A2H4G807   A0A385PJZ7   A0A194Q5S4   A0A212ERS5   + More
S4PI12   A0A2H1WVH0   A0A2H1WX86   A0A2A4J8P0   A0A0L7LMZ6   A0A2D1CRP5   A0A0N0PB63   A0A2H4LI79   A0A075BRW2   A0A222NUL1   A0A0K0XR01   A0A0A7BZ72   H9J540   A0A2W1BH28   Q1AMF5   A0A222NUL2   A0A2A4K9P8   A0A2H1WKW0   F1C928   A0A194Q5N9   A0A0A7BZ27   A0A0K0XQY0   A0A0A7BZF0   A0A0L7L8L1   A0A0N1PFQ5   Q1HAT5   A0A2H4G806   A0A1W4WVX2   E2F399   A0A1E1W5U5   A0A2H1W1Y8   A0A2R5LGJ5   A0A2H4LHL7   U5QB76   A0A2A4J9J4   T1ITY9   A0A0K0XR50   A0A2A4JVR5   A0A1D2AIL6  

PDB

4YE0     E-value=2.62548e-06,     Score=117

KEGG

101741436    K09542 crystallin, alpha B | (RefSeq) heat shock protein Hsp-12.2-like

PATHWAY

04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)
04213    Longevity regulating pathway - multiple species - Bombyx mori (domestic silkworm)

GO

GO:0046872  

Length:

167

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.06583

outside

1  -  167

 

 

Pi

215.319672

Theta

192.296237

Tajima's D

0.417385

CLR

0.157768

CSRT

0.488025598720064

Interpretation

Uncertain