SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02363
Pre Gene Modal
BGIBMGA014206
Annotation
PREDICTED:_peroxidasin_homolog_[Papilio_polytes]
Location in the cell
Extracellular   Reliability : 2.274
 

Sequence

CDS
ATGCAAATAACTCAAGTGTCATGGATACGTCACCGCGACCTGCACATCCTGACCGTGGGCGGGTACACGTACACGTCCGACCAGCGCTTCCAGGCCACGCACTCCCCTCAGACCGACGACTGGACGCTGCACATCAAGTGGGCCCAGCAGAGAGACGCGGGAGTGTACGAGTGCCAAGTCTCCACGCAGCCGGTGCGCTCATTCTTCGTGACCCTACATGTTGTGGTACCGTCAGCCAGGATCCTAGGTGGACCAGACCTGCACGTGGACATTGGCTCCACAATCAACCTCACCTGCCTCATCCAGTTCAGCCCGGAGCCCCCTGCCTACATATTCTGGTACCATGAGGACGAGGTGAGCGGAAACAAACAGGTGATCTCGTACGACTCCTCCCGGGGCGGCGTCTCCGTGGTGACCGAGAAGGGCGCCGCCACCACGTCGTACCTGCTGGTGCAGGACGCGACGCCCGCGGACTCCGGCCGCTACTCCTGCTCGCCTTCCAACGCCGAGGTCGCTTCCGTCCGCGTCCACGTACTCAATGGCGAGCGTCCGGCGGCCATGCAGACGGGCTCGGCCGGTCTGTCTAACAGCTGGAGGTGTATCGTGGCGCTACTGGCGGTGGCCGTACTCCGCGCCAAGCTACTGCACGCCCTGCTCGACAGCTGA
Protein
MQITQVSWIRHRDLHILTVGGYTYTSDQRFQATHSPQTDDWTLHIKWAQQRDAGVYECQVSTQPVRSFFVTLHVVVPSARILGGPDLHVDIGSTINLTCLIQFSPEPPAYIFWYHEDEVSGNKQVISYDSSRGGVSVVTEKGAATTSYLLVQDATPADSGRYSCSPSNAEVASVRVHVLNGERPAAMQTGSAGLSNSWRCIVALLAVAVLRAKLLHALLDS

Summary

EMBL
KZ150107    PZC73388.1    KQ460401    KPJ14958.1    ODYU01004497    SOQ44437.1    + More
KQ459465    KPJ00358.1    KQ971307    EFA11032.2    GEDC01017259    GEDC01001577    JAS20039.1    JAS35721.1    GEBQ01005423    JAT34554.1    CH379069    EDY73643.2    CH902618    EDV40592.2    OUUW01000002    SPP76996.1    DS235440    EEB15741.1    CH940647    EDW69466.2    CH916366    EDV96087.1    GGMS01014578    MBY83781.1    CH933809    EDW18033.2    CM000159    EDW93988.1    KYB29813.1    CM002912    KMY98810.1    AE014296    AGB94367.1    JRES01000260    KNC32896.1    CH954178    EDV51282.2    ABLF02022137    ABLF02022138    ABLF02033119    ABLF02033121    ABLF02033124    ABLF02033126    ABLF02033127    ABLF02033128    ABLF02033129    ABLF02033130    KPU78634.1    SPP76995.1    KRF84403.1    KRK01590.1    AHN58043.1    CVRI01000060    CRL03849.1    LJIG01002178    KRT84762.1    JXJN01010073    JXJN01010074    JXJN01010075    CH963847    EDW73260.2    CH479206    EDW30922.1    KMY98812.1    APCN01005575    APCN01005576    APCN01005577    APCN01005578    APCN01005579    APCN01005580    APCN01005581    AY069421    AAF50177.2    AAL39566.1    CM000363    EDX09940.1    AGB94369.1    KMY98811.1    AGB94368.1    CH480815    EDW40958.1    AAAB01008933    PYGN01000781    PSN40872.1    LJIJ01000015    ODN05835.1    APGK01047059    KB741077    ENN74097.1    KB632384    ERL94228.1    ACPB03002867    UFQS01001348    UFQT01001348    SSX10453.1    SSX30139.1    AJWK01013547    KQ459606    KPI91128.1    QOIP01000007    RLU20593.1    CCAG010018348    CCAG010018349    KQ981656    KYN38560.1    GL452255    EFN77710.1    AAZX01000015    AAZX01000039    AAZX01005416    AAZX01007570    AAZX01007787    AAZX01009562    AAZX01012879    AAZX01013757    AAZX01022366    GBYB01012655    JAG82422.1    NWSH01000633    PCG75139.1    GL435087    EFN74030.1    AXCN02002398    CVRI01000017    CRK90201.1    GAMC01021286    JAB85269.1    GAKP01002963    JAC55989.1    NNAY01000555    OXU27698.1    GEDC01019431    JAS17867.1    PCG75138.1    BABH01001301    BABH01001302    AGBW02013403    OWR43480.1    KQ460947    KPJ10533.1    GDHC01011973    JAQ06656.1    CM000160    KRK03800.1    CH902617    KPU79571.1    KRK01594.1    KPU78637.1    GEBQ01008578    JAT31399.1    GECZ01030217    GECZ01002715    JAS39552.1    JAS67054.1    CCAG010017875    CCAG010017876    AGB94370.1    KMY98822.1    KQS43764.1    ACPB03002071    ACPB03002072    EDW70167.2    GFTR01004621    JAW11805.1    GBXI01015453    GBXI01011772    JAC98838.1    JAD02520.1   
Pfam
PF07679   I-set        + More
PF07686   V-set
PF00047   ig
PF13895   Ig_2
Interpro
IPR003598   Ig_sub2        + More
IPR036179   Ig-like_dom_sf       
IPR037448   Zig-8       
IPR013098   Ig_I-set       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR013783   Ig-like_fold       
IPR013106   Ig_V-set       
IPR013151   Immunoglobulin       
SUPFAM
SSF48726   SSF48726       
Gene 3D
PDB
6EG0     E-value=3.55573e-42,     Score=428

Ontologies

Topology

Length:
221
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.56638
Exp number, first 60 AAs:
0.00102
Total prob of N-in:
0.26978
outside
1  -  221
 
 

Population Genetic Test Statistics

Pi
227.641117
Theta
193.084092
Tajima's D
0.543666
CLR
0.252765
CSRT
0.527973601319934
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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