Gene

KWMTBOMO02361  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014208

Annotation

cytochrome_b5_[Bombyx_mori]

Location

Bomo_Chr5(-):171455-172249      View in EpiBrowser

Full name

Cytochrome b5      

Location in the cell

Cytoplasmic   Reliability : 2.523

CDS

ATGCAGCCCGGGCTCAGACAGTACACCAGGGACGAGGTCGCCGATAGTAAGACCGCAACGGAGACGCTCTTCATCATCGATAATATCGTCTACGATGTGCATAAATTTCTGGACGAGCATCCCGGCGGACACGAGGTGCTCATCAACGTCGCCGGCAAGGACGCCTCCGAGGAGTTCGAGGACGTGGGCCACAGCATGGACGCCAGGGAACTCATGAAGGGTTACGTGGTGGGCGAGCTCGTCGATGCCGACAAAGTGCCCATCAGCAAGAAGCAGTACAGCTGGGAGGACACCGCGAAGACCTCCGAGACCGAGGCCTCCTTCGTCAACTCATGGAAGTTCCCGGTGCTGCTGGGCCTCGCGCTCACCTTGCTCTACTCATATATATTCGGATAG

Protein

MQPGLRQYTRDEVADSKTATETLFIIDNIVYDVHKFLDEHPGGHEVLINVAGKDASEEFEDVGHSMDARELMKGYVVGELVDADKVPISKKQYSWEDTAKTSETEASFVNSWKFPVLLGLALTLLYSYIFG

Description

Cytochrome b5 is a membrane-bound hemoprotein which functions as an electron carrier for several membrane-bound oxygenases.

Similarity

Belongs to the cytochrome b5 family.

Keywords

Alternative splicing   Complete proteome   Electron transport   Endoplasmic reticulum   Heme   Iron   Membrane   Metal-binding   Microsome   Reference proteome   Transmembrane   Transmembrane helix   Transport   3D-structure  

Feature

chain  Cytochrome b5
splice variant  In isoform A.

Uniprot

H9JXE2   Q2F5S4   A0A2A4JL07   A0A0L7K413   E7E2N6   A0A0K8TJR3   + More
S4PD20   O76336   A0A2H1WG38   A0A212ESA8   A0A0R8YF94   A0A3G1T1H8   A0A194QAC1   I4DJN2   A0A0N1IPE8   A0A0N1PHD0   B4HR33   B4QEC2   A0A3B0JQS7   B3MHB5   B4P1R4   B4MIM9   A0A0M4EGS4   B4LMG8   A0A1I8Q4S4   A0A1W4V0B7   E9P245   Q9V4N3   A8VEL0   Q28YJ0   B4H8J7   B3N9X4   A0A212F5F3   A0A0L0CBD8   T1PG52   P49096   B4KSK1   A0A067R3L8   A0A0A1WSM2   A0A1L8EES6   A0A183F3V6   A0A3P7TE44   R4UNH6   A0A034WH44   W8AJK5   A0A2H1VTT2   A0A1B0GBU5   A0A1A9X8P6   A0A1B0BYD8   A0A1A9Z7K7   A0A1A9VJ04   A0A0K8W0V0   A0A2P8Y4U4   A0A0C9R7X4   A0A0A9WVI7   B4J6Y8   A0A146KRA0   A0A1W4W366   W4ZGD3   A0A0K8TSV5   D6W9P6   A0A194PVZ8   A0A1Y1NGY9   A0A1L8E0R6   A0A1L8E0L3   A0A1D5PE25   A0A1E1XT28   A0A2S2NIQ7   A0A2G9V7E9   A0A1E1WZD3   Q5ZI85   A0A226NC48   A0A226PE78   A0A2R7VZP6   F1NSI3   T1D375   A0A023FUF0   A0A0N0PEQ7   Q1ZZP7   H9G7M2   Q17CQ7   A0A023GEV1   G3MMY1   A0A023EFA5   A0A2S2R2S6   A0A182JND2   B5FYJ7   A0A0P4VIW4   R4G7X8   A0A218USH7   A0A3P7IC41   A0A0B2VHV0  

Pubmed

19121390    26227816    22689565    28756777    23622113    10196737    + More
22118469    26354079    22651552    17994087    22936249    17550304    21279680    10731132    12537572    12537569    15632085    26108605    24845553    25830018    25348373    24495485    29403074    25401762    26823975    26369729    18362917    19820115    28004739    29209593    28503490    15642098    24621616    15592404    24330624    21881562    17510324    22216098    24945155    26483478    17018643    27129103   

EMBL

BABH01041568    DQ311349    ABD36293.1    NWSH01001215    PCG72092.1    PCG72093.1    + More
JTDY01011131    KOB57491.1    HQ609844    KZ150107    ADU02195.1    PZC73390.1    GBRD01000072    JAG65749.1    GAIX01005152    JAA87408.1    AF061105    AAC33731.1    ODYU01008432    SOQ52033.1    AGBW02012839    OWR44367.1    KP083295    ALA55992.1    MG992403    AXY94841.1    KQ459465    KPJ00361.1    AK401500    BAM18122.1    KPJ00364.1    KQ460401    KPJ14960.1    KPJ14962.1    CH480816    EDW46776.1    CM000362    CM002911    EDX06031.1    KMY92013.1    OUUW01000001    SPP75716.1    CH902619    EDV36892.1    CM000157    EDW89200.1    CH963719    EDW71968.1    CP012524    ALC41660.1    CH940648    EDW62063.1    HQ864711    JN374926    JN374927    JN374928    JN374929    JN374930    JN374931    JN374932    JN374933    JN374934    JN374935    JN374936    JN374937    JN374938    JN374939    JN374940    JN374941    JN374942    JN374943    JN374944    JN374945    JN374946    JN374947    JN374948    KX532130    ADW95864.1    AEO12023.1    AEO12024.1    AEO12025.1    AEO12026.1    AEO12027.1    AEO12028.1    AEO12029.1    AEO12030.1    AEO12031.1    AEO12032.1    AEO12033.1    AEO12034.1    AEO12035.1    AEO12036.1    AEO12037.1    AEO12038.1    AEO12039.1    AEO12040.1    AEO12041.1    AEO12042.1    AEO12043.1    AEO12044.1    AEO12045.1    ANY27940.1    AE013599    BT001378    BT004852    BT015196    EU166920    ABW37749.1    CM000071    EAL25975.2    CH479223    EDW35032.1    CH954177    EDV59670.1    AGBW02010203    OWR48971.1    JRES01000655    KNC29547.1    KA646863    AFP61492.1    L38464    CH933808    EDW09506.1    KK852927    KDR13701.1    GBXI01012213    JAD02079.1    GFDG01001572    JAV17227.1    UZAH01000754    VDO19231.1    KC740896    AGM32720.1    GAKP01004056    JAC54896.1    GAMC01017791    GAMC01017790    JAB88765.1    ODYU01004391    SOQ44220.1    CCAG010005890    JXJN01022588    GDHF01007542    JAI44772.1    PYGN01000929    PSN39277.1    GBYB01002871    JAG72638.1    GBHO01033091    GBRD01010377    JAG10513.1    JAG55447.1    CH916367    EDW02069.1    GDHC01020713    JAP97915.1    AAGJ04046621    AAGJ04046622    GDAI01000161    JAI17442.1    KQ971312    EEZ98523.1    KQ459596    KPI95305.1    GEZM01007769    JAV94947.1    GFDF01001815    JAV12269.1    GFDF01001814    JAV12270.1    GFAA01001275    JAU02160.1    GGMR01004438    MBY17057.1    KZ344990    PIO77670.1    GFAC01007042    JAT92146.1    AJ720899    CAG32558.1    MCFN01000104    OXB65087.1    AWGT02000084    OXB78366.1    KK854198    PTY12966.1    AADN05000558    GALA01001363    JAA93489.1    GBBL01002271    JAC25049.1    KQ459717    KPJ20319.1    ABLF02011610    DQ416029    ABD76376.1    AAWZ02031406    AAWZ02031407    CH477305    EAT44139.1    GBBM01003039    JAC32379.1    JO843232    AEO34849.1    JXUM01024828    GAPW01006133    KQ560702    JAC07465.1    KXJ81223.1    GGMS01015144    MBY84347.1    DQ214014    ACH44108.1    GDKW01002599    JAI53996.1    ACPB03017900    GAHY01001947    JAA75563.1    MUZQ01000150    OWK56689.1    UYWY01021902    VDM45118.1    JPKZ01001707    KHN80580.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000007151    UP000053268    UP000053240    + More
UP000001292    UP000000304    UP000268350    UP000007801    UP000002282    UP000007798    UP000092553    UP000008792    UP000095300    UP000192221    UP000000803    UP000001819    UP000008744    UP000008711    UP000037069    UP000095301    UP000009192    UP000027135    UP000050761    UP000092444    UP000092443    UP000092460    UP000092445    UP000078200    UP000245037    UP000001070    UP000192223    UP000007110    UP000007266    UP000198323    UP000198419    UP000000539    UP000007819    UP000001646    UP000008820    UP000069940    UP000249989    UP000075881    UP000015103    UP000197619    UP000267007    UP000031036   

PRIDE

H9JXE2    Q2F5S4    E9P245    Q9V4N3    A8VEL0    Q5ZI85    + More

Pfam

PF00173   Cyt-b5

Interpro

IPR036400   Cyt_B5-like_heme/steroid_sf        + More
IPR001199   Cyt_B5-like_heme/steroid-bd       
IPR018506   Cyt_B5_heme-BS       

SUPFAM

SSF55856   SSF55856       

Gene 3D

3.10.120.10    

ProteinModelPortal

H9JXE2   Q2F5S4   A0A2A4JL07   A0A0L7K413   E7E2N6   A0A0K8TJR3   + More
S4PD20   O76336   A0A2H1WG38   A0A212ESA8   A0A0R8YF94   A0A3G1T1H8   A0A194QAC1   I4DJN2   A0A0N1IPE8   A0A0N1PHD0   B4HR33   B4QEC2   A0A3B0JQS7   B3MHB5   B4P1R4   B4MIM9   A0A0M4EGS4   B4LMG8   A0A1I8Q4S4   A0A1W4V0B7   E9P245   Q9V4N3   A8VEL0   Q28YJ0   B4H8J7   B3N9X4   A0A212F5F3   A0A0L0CBD8   T1PG52   P49096   B4KSK1   A0A067R3L8   A0A0A1WSM2   A0A1L8EES6   A0A183F3V6   A0A3P7TE44   R4UNH6   A0A034WH44   W8AJK5   A0A2H1VTT2   A0A1B0GBU5   A0A1A9X8P6   A0A1B0BYD8   A0A1A9Z7K7   A0A1A9VJ04   A0A0K8W0V0   A0A2P8Y4U4   A0A0C9R7X4   A0A0A9WVI7   B4J6Y8   A0A146KRA0   A0A1W4W366   W4ZGD3   A0A0K8TSV5   D6W9P6   A0A194PVZ8   A0A1Y1NGY9   A0A1L8E0R6   A0A1L8E0L3   A0A1D5PE25   A0A1E1XT28   A0A2S2NIQ7   A0A2G9V7E9   A0A1E1WZD3   Q5ZI85   A0A226NC48   A0A226PE78   A0A2R7VZP6   F1NSI3   T1D375   A0A023FUF0   A0A0N0PEQ7   Q1ZZP7   H9G7M2   Q17CQ7   A0A023GEV1   G3MMY1   A0A023EFA5   A0A2S2R2S6   A0A182JND2   B5FYJ7   A0A0P4VIW4   R4G7X8   A0A218USH7   A0A3P7IC41   A0A0B2VHV0  

PDB

2IBJ     E-value=1.6165e-19,     Score=229

KEGG

100127129    K23490 cytochrome b5 | (RefSeq) cytochrome b5

GO

GO:0016021   GO:0020037   GO:0046872   GO:0045610   GO:0035206   GO:0055114   GO:0005789   GO:0012505   GO:0008270   GO:0050660   GO:0003995   GO:0005515   GO:0005488   GO:0006289   GO:0004518   GO:0006281   GO:0048384  

Subcellular location

Endoplasmic reticulum membrane  
Microsome membrane  

Length:

131

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.20816

Exp number, first 60 AAs:

0.00019

Total prob of N-in:

0.93092

inside

1  -  107

TMhelix

108  -  130

outside

131  -  131

 

 

Pi

282.728998

Theta

195.633981

Tajima's D

1.401198

CLR

0.005185

CSRT

0.767211639418029

Interpretation

Uncertain