Gene

KWMTBOMO02359

Annotation

reverse_transcriptase_[Danaus_plexippus]

Location

Bomo_Chr5(-):145547-149515      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.44 Nuclear   Reliability : 1.035

CDS

ATGGCCCGGCTCCGCGAGATCTTGCCTGATCCGGAGGTGGTGAGGATCGACAGGCCTGTCAGAATGGCGGAGATCAAGGTGACGGGCCTGGACGAGTGCGCCACGAAAGAGGAGGTGGCTGCCGCTATCGCATTGCAGGGGAACTGTGCTCTTGCAAACGTCAAGGTGGGGGAGCTTCGGAGTACATATTCCGGAACTCGCTCTGTATGGGCGCGGTGCCCCGTACAGACAGCCACCCTACTGGCTACGCCTGCACAGGGAAAGCCCGCTGACACGCCCGGTAGGCTACGCGTGGGGTGGGTTATTGCCCACGTGCAGTTGCAGGAAGCTCGACCATGGCGATGCCTTCGATGTTTCGGCACCGGGCACGGCCTCGCCAAGTGCTCGTCAGCTGTTGACCGCAGCGGACTATGTTTCCGGTGCGGCCAATCTGGGCACAAGGCCGCTTCCTGCACTGCCGCCATGCCACACTGTGTATTGTGCGACGCGGAGAAGCGGCGGGCCAACCACCGGGCGAATTTGAACCACTCCGCCAGGGCGCAGGATCTCCTCGTCCACACCATGGTGGAGTGGTCAATCGATGTTGCCATAGCCGCGGAGCCGTACTTCGTCCCTGCGGACCAGGATGCCTGGATCGGGGACGTCGACGGCTCCGTGGCTATTACTATCAGGCAGGCCGCGGCGTTACCCCCCCTGGTGATGGTGGCCAGGGGATCCGGTTATGTCGCGGCCAGGGTCGACGAAACCGTCGTGATCGGGGTATACTTCTCTCCGAATAGACATCTCGCCGAGTTCGAGCAGTTCCTGGGCGGGCTTGAGGTGTTGGTTCACCGCCTCGGGTCCCGCCCGGTTATCTTAGCGGGAGACCTCAACGCAAAATGGGTGACTTGGGGTTCCCCCCGCTCGGACTCACGCGGCAGGATGCTCTCGGAGTGGGCGATCGCGGCTGGTCTCTGTCTTTTGAACAGAGGTTCGGTCGCGACTTGCGTGCGATGGAACGGCGAATCTCACGTGGACGTGACATTCGCATCTCCGTCCATCGCACGCCGCACACGTGGCTGGCGCGTTCTTGAGGGGGCGGAGACGCTCTCGGACCATCGATACGTCCGATTTGAGCTCTCAGCCTCCTCTCGATCCGCGTCGGCTATGAACGCCCGCGGTGAGGAGGAGCTCCCGCGAAGTGCTCCTCGGTCATTCCCCAGGTGGGCACTGAAGCGCCTGAATAAGGAGCTCCTGGTGGAGGCAGCCACGGTGGCTGCGTGGGCACCCGTGCCTACTAGCCCCGTGGACGTGGAGTCAGAGGCTGACTGGTTCCGGGGAACGATGGGTCGTATTTGTGACTCAGCGATGCCCCGGGTAGGCAGCAGTGCTCCGCGTGGCGGTGCGTACTGGTGGTCGCCCGAAATCGCGCAACTCCGCGAGGAGTGCGTGCGGGCGCGCCGCCGGAGCGCTCGCCATCGCCGCCGCCGCCTTCGCGATGAGGACTTCGCGGAGGTAGCGGACCGGTTGCGCGCCGACTGCCGCCAAAAGCAGGAAGCGTTGCGACTGGCCATCGGTGAGGCCAAATCTCAGGGCATGCAGACTCTCTTGGAGATGCTCGATCAGGATCCCTGGGGGCGCCCGTACCAAACGGTCCGCAAGAAATTGCGGCCGTGGGCGCTCCCAGTGACGGAGCGTCTCCAGCCTCAGCAGCTGCGGGAGATTGTCTCCGGGCTGTTCCCGCAGATGGAGAGGGACTTTGAGCCTCCCTCCATGGGCGCGCCGCCTCGCAGTGACGTGAGCGGTGTTGCTGAGGTGGTCCCTCCGAGCATTTTGGAGGAAGAGATTCATGCGGCCGTGTTGAGGATGCGGAGAAAAGACGCGGCCCCCGGCCCTGACGGTGTTCACGGCCGGGTCTGGGATTTGGCCTTCGGTGCCCTTGGGGACCGGCTCGTGCGGCTCTTTGAAGCCTGCTTCGAGTCGGGACGGTTTCCTAAGCAGTGGAAGACGGGCAGACTCGTCCTTCTGAGGAAGGAGGGGCGCCCCGCAGACTCACCTGCGGGGTACCGCCCCATCGTGTTGCTGGACGAGGCGGGAAAATTGTTGGAGCGAGTTATCGCCGCCCGCATCGTCCGGCACCTGACCGGGACGGGTCCCGATCTGTCGGAGGAACAGTATGGCTTCAGAGAGGGCCGCTCTACTATCGACGCGATTATGCGCGTGCGTGCCCTCTCTGACGAAGCTGTCGCCCGCGGTGGGGTGGCCTTGGCGGTGTCCCTGGATATCGCCAACGCTTTTAACACCTTGCCCTGGTCAGTGATCGCGGGGGCGCTCGAATATCATGGCGTCCCCGCGTACCTCCGCCGACTGATCGGGTCCTATCTCGAGGACAGATCGGTCGTGTGCACCGGACACGGTGGTGCGGTGCTCCGCTTTCCGGTCGAGCGCGGTGTTCCACAGGGGTCGGTCCTTGGCCCTCTCCTGTGGAATATCGGTTACGACTGGGCTCTGAGGAGCGCCCTGCACGGCCCTCTCCCGGGCCTAAGCGTTGTGTGTTACGCGGATGACACGTTGGTCGTGGCCCGGGGGAGGAACTACCAAGAGTCTGCTCGTCTTGCCTGCGCAGGGGTGGCATTCGTCGTCGGTAAGATCCGAAGGCTGGGCCTCGACGTGGCCCTCGAGAAATCCCAGGCCCTGCTGTTTCACAGGGCTGGGAGAGAGCCGCCACCCGGGGCCCACCTGGTGATTGGAGGCGTCCGCGTCGAGGTCGGGGTGACTGGGTTACGGTACCTCGGTCTCGAATTGGACGGTCGTTGGAACTTCCGCGCTCATTTCGAGAAGTTGGCCCCCCGACTGATGGCGACGGCTGGATCGCTGAGTCGGCTCTTGCCAAACGTCGGAGGGCCTGACACGGTGGTGCGCCGCCTCTACGTGGGGGTGGTGCGGTCTATTGCATTATACGGAGCCCCCGTGTGGTGCCGCGCCTTGACTCGCAGAAACGTCGTGGCGCTGCGACGCCCGCAGCGTGCAATCGCAGTCAGGGCGATTCGTGGATACCGCACCGTCTCCTTCGAGGCGGCGTGCGTTCTCGCCGGGACGCCTCCCTGGGACCTGGAGGCGGAGGCGCTCGCTGCCGATTATGCGTGGCGTTGTGACCTTCGCGACAGGGGGGAACCACGTCCCGGAGAAGGAGCAATTAGAGCGCGGAGGCTCCAATCTCGGCGGTCTGTGTTGGAGGCGTGGTCTCGCCGCTTGGCGGACCCGTCGGCCGGTCTCCGGACCGTCGAGGCGGTGCGCCCGGTCCTCGCGAAATGGGCGAACCGTGACCAAGGGCGTCTCACCTTCCGGTTGACGCAAATGCTTACCGGCCATGGGTGTTTTGGCCGGTACCTGCATCGCGTTGCCCGGAGGGAACCGACGATGGAGTGTCACCACTGTGACTGCGACGAGGACACGGTCGAGCATACGCTCGCATATTGCCCCGCATGGGTGGAGCAACGCCGTGTCCTTGTCTCGCAAATAGGACCGGACTTGTCGCTGCCGACTGTCGTGGCTACGATGCTCGGCAGCGATGAGTCCTGGAAGGCGATGCTCGACTTCTGCGAGTGCACCATCTCGCAGAAGGAGGCGGCGGAACGAGAGAGGGAGAGCTCATCCCTCTCCGCACCTATCCGTCGCCGCCGAGCCGGGGGCCGCAGAAGGGCTTTTGTCCGACTTCGGCCCCTGTAA

Protein

MARLREILPDPEVVRIDRPVRMAEIKVTGLDECATKEEVAAAIALQGNCALANVKVGELRSTYSGTRSVWARCPVQTATLLATPAQGKPADTPGRLRVGWVIAHVQLQEARPWRCLRCFGTGHGLAKCSSAVDRSGLCFRCGQSGHKAASCTAAMPHCVLCDAEKRRANHRANLNHSARAQDLLVHTMVEWSIDVAIAAEPYFVPADQDAWIGDVDGSVAITIRQAAALPPLVMVARGSGYVAARVDETVVIGVYFSPNRHLAEFEQFLGGLEVLVHRLGSRPVILAGDLNAKWVTWGSPRSDSRGRMLSEWAIAAGLCLLNRGSVATCVRWNGESHVDVTFASPSIARRTRGWRVLEGAETLSDHRYVRFELSASSRSASAMNARGEEELPRSAPRSFPRWALKRLNKELLVEAATVAAWAPVPTSPVDVESEADWFRGTMGRICDSAMPRVGSSAPRGGAYWWSPEIAQLREECVRARRRSARHRRRRLRDEDFAEVADRLRADCRQKQEALRLAIGEAKSQGMQTLLEMLDQDPWGRPYQTVRKKLRPWALPVTERLQPQQLREIVSGLFPQMERDFEPPSMGAPPRSDVSGVAEVVPPSILEEEIHAAVLRMRRKDAAPGPDGVHGRVWDLAFGALGDRLVRLFEACFESGRFPKQWKTGRLVLLRKEGRPADSPAGYRPIVLLDEAGKLLERVIAARIVRHLTGTGPDLSEEQYGFREGRSTIDAIMRVRALSDEAVARGGVALAVSLDIANAFNTLPWSVIAGALEYHGVPAYLRRLIGSYLEDRSVVCTGHGGAVLRFPVERGVPQGSVLGPLLWNIGYDWALRSALHGPLPGLSVVCYADDTLVVARGRNYQESARLACAGVAFVVGKIRRLGLDVALEKSQALLFHRAGREPPPGAHLVIGGVRVEVGVTGLRYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYGAPVWCRALTRRNVVALRRPQRAIAVRAIRGYRTVSFEAACVLAGTPPWDLEAEALAADYAWRCDLRDRGEPRPGEGAIRARRLQSRRSVLEAWSRRLADPSAGLRTVEAVRPVLAKWANRDQGRLTFRLTQMLTGHGCFGRYLHRVARREPTMECHHCDCDEDTVEHTLAYCPAWVEQRRVLVSQIGPDLSLPTVVATMLGSDESWKAMLDFCECTISQKEAAERERESSSLSAPIRRRRAGGRRRAFVRLRPL

Uniprot

Q868Q4   Q8MY31   Q8MY27   Q8MY33   Q8MY35   A0A0J7N1D9   + More
O01419   A0A2W1C3J5   A0A0J7KQK3   A0A0J7KRB8   A0A0J7NFZ0   A0A0J7N0R3   A0A0J7KFH2   A0A0J7KJG6   A0A0J7KIY5   A0A0J7KIM6   A0A0J7K3F1   A0A0J7KJH4   A0A0J7KF37   A0A0J7KF91   A0A0J7KPR0   A0A0J7MY17   A0A0J7KYD2   A0A0J7KF40   J9KJG8   J9JWJ3   A0A0J7MWN5   J9KT61   A0A0J7KQY4   A0A2S2PEZ7   X1WJY4   A0A0J7NAV8   A0A0J7KIS5   X1WZ64   A0A2S2NQQ6   A0A2H8TR36   J9KM84   J9KWM9   T1DCM0   J9LA43   A0A139WAH4   A0A2M4BBV9   J9LQQ1   J9LVU7   Q868S4   T1DG89   T1DG59   A0A2M4BC01   J9L0J0   A0A2M4ADW9   F7IYU8   A0A0J7NC28   J9KNS1   A0A2S2P7D1   J9JY94   A0A2H8TIE5   A0A142LX45   A0A2S2PRL8   W8ANK7   W8ADE4   J9KNN8   A0A2M4CS98   A0A2M4BC28   A0A139W940   X1WXT5   J9M6A5   F7IYV5   A0A139W9B3   A0A139WNC9   A0A139WN93   J9LJ80   A0A139W939   A0A034WR48   A0A0J7KMG5   J9LM37   A0A2M4BC18   F7IYV7   Q9N9Z1   J9KUM6   A0A2S2NJ82  

Pubmed

12644555    9092665    28756777    24330624    18362917    19820115    + More
25527032    24495485    25348373   

EMBL

AB090825    BAC57926.1    AB078931    BAC06456.1    AB078935    BAC06462.1    + More
AB078930    BAC06454.1    AB078929    BAC06452.1    LBMM01012027    KMQ86470.1    D85594    BAA19776.1    KZ149896    PZC78733.1    LBMM01004272    KMQ92618.1    LBMM01003988    KMQ92922.1    LBMM01005474    KMQ91485.1    LBMM01012412    KMQ86235.1    LBMM01008278    KMQ89009.1    LBMM01006671    KMQ90407.1    LBMM01006954    KMQ90166.1    LBMM01007036    KMQ90099.1    LBMM01015025    KMQ84953.1    LBMM01006657    KMQ90417.1    LBMM01008448    KMQ88867.1    LBMM01008445    KMQ88871.1    LBMM01004634    KMQ92224.1    LBMM01014122    KMQ85315.1    LBMM01002052    KMQ95336.1    LBMM01008422    KMQ88894.1    ABLF02041886    ABLF02013358    ABLF02013361    ABLF02054869    LBMM01015285    KMQ84870.1    ABLF02009073    ABLF02030702    ABLF02042963    LBMM01004262    KMQ92649.1    GGMR01015159    MBY27778.1    ABLF02011238    LBMM01007425    KMQ89740.1    LBMM01006977    KMQ90149.1    ABLF02011183    ABLF02041884    GGMR01006838    MBY19457.1    GFXV01003903    MBW15708.1    ABLF02018942    ABLF02041885    ABLF02011927    GALA01001777    JAA93075.1    ABLF02018098    KQ971388    KYB24913.1    GGFJ01001369    MBW50510.1    ABLF02030663    ABLF02041312    ABLF02034925    AB090815    BAC57906.1    GALA01001776    JAA93076.1    GALA01000302    JAA94550.1    GGFJ01001370    MBW50511.1    ABLF02027248    GGFK01005660    MBW38981.1    AB593321    BAK38639.1    LBMM01006996    KMQ90130.1    ABLF02018808    GGMR01012748    MBY25367.1    ABLF02007989    GFXV01002090    MBW13895.1    KU543683    AMS38371.1    GGMR01019493    MBY32112.1    GAMC01020517    JAB86038.1    GAMC01020519    GAMC01020515    JAB86040.1    ABLF02023257    GGFL01004044    MBW68222.1    GGFJ01001439    MBW50580.1    KQ972691    KXZ75806.1    ABLF02004854    ABLF02041317    ABLF02020969    AB593325    BAK38646.1    KQ972544    KXZ75869.1    KQ971310    KYB29500.1    KYB29499.1    ABLF02015311    ABLF02015320    ABLF02034009    ABLF02043484    KXZ75807.1    GAKP01002292    JAC56660.1    LBMM01005465    KMQ91492.1    ABLF02014650    GGFJ01001453    MBW50594.1    AB593327    BAK38648.1    AJ278684    CAB99192.1    ABLF02041557    GGMR01004600    MBY17219.1   

Proteomes

UP000036403    UP000007819    UP000007266   

PRIDE

Q868Q4    O01419    Q9N9Z1   

Pfam

PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1
PF03372   Exo_endo_phos
PF01553   Acyltransferase
PF00098   zf-CCHC
PF00075   RNase_H
PF12017   Tnp_P_element

Interpro

IPR000477   RT_dom        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR002123   Plipid/glycerol_acylTrfase       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR012337   RNaseH-like_sf       
IPR002156   RNaseH_domain       
IPR036397   RNaseH_sf       
IPR000663   Natr_peptide       
IPR021896   Transposase_37       

SUPFAM

SSF56219   SSF56219        + More
SSF57756   SSF57756       
SSF53098   SSF53098       

Gene 3D

3.60.10.10     3.30.420.10    

ProteinModelPortal

Q868Q4   Q8MY31   Q8MY27   Q8MY33   Q8MY35   A0A0J7N1D9   + More
O01419   A0A2W1C3J5   A0A0J7KQK3   A0A0J7KRB8   A0A0J7NFZ0   A0A0J7N0R3   A0A0J7KFH2   A0A0J7KJG6   A0A0J7KIY5   A0A0J7KIM6   A0A0J7K3F1   A0A0J7KJH4   A0A0J7KF37   A0A0J7KF91   A0A0J7KPR0   A0A0J7MY17   A0A0J7KYD2   A0A0J7KF40   J9KJG8   J9JWJ3   A0A0J7MWN5   J9KT61   A0A0J7KQY4   A0A2S2PEZ7   X1WJY4   A0A0J7NAV8   A0A0J7KIS5   X1WZ64   A0A2S2NQQ6   A0A2H8TR36   J9KM84   J9KWM9   T1DCM0   J9LA43   A0A139WAH4   A0A2M4BBV9   J9LQQ1   J9LVU7   Q868S4   T1DG89   T1DG59   A0A2M4BC01   J9L0J0   A0A2M4ADW9   F7IYU8   A0A0J7NC28   J9KNS1   A0A2S2P7D1   J9JY94   A0A2H8TIE5   A0A142LX45   A0A2S2PRL8   W8ANK7   W8ADE4   J9KNN8   A0A2M4CS98   A0A2M4BC28   A0A139W940   X1WXT5   J9M6A5   F7IYV5   A0A139W9B3   A0A139WNC9   A0A139WN93   J9LJ80   A0A139W939   A0A034WR48   A0A0J7KMG5   J9LM37   A0A2M4BC18   F7IYV7   Q9N9Z1   J9KUM6   A0A2S2NJ82  

PDB

1WDU     E-value=1.57691e-09,     Score=155

KEGG

101743524    no KO assigned | (RefSeq) uncharacterized LOC101743524

GO

GO:0003964   GO:0016746   GO:0016021   GO:0008270   GO:0003676   GO:0004523   GO:0005179   GO:0005576   GO:0004803   GO:0006313   GO:0004519   GO:0050660   GO:0003995   GO:0005515   GO:0005488   GO:0006289   GO:0004518   GO:0006281   GO:0048384  

Length:

1235

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04652

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00006

outside

1  -  1235

 

 

Pi

0

Theta

0

Tajima's D

0

CLR

316.800667

CSRT

0

Interpretation

Uncertain