Gene

KWMTBOMO02350

Pre Gene Modal

BGIBMGA014410

Annotation

PREDICTED:_uncharacterized_protein_LOC106718269_[Papilio_machaon]

Location

Bomo_Chr5(+):38526-39057      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.327 Extracellular   Reliability : 1.266

CDS

ATGAAAGCAAACGGCTGGAGCAAGTCACATGTTATGACGGCGCTTACTTTGGGACTCCGTGAACAAGCTTTGACCATCCTGGAAACCTTAGGAAAGGATGCAACCTATGAGCAGCTCGTGGAAGCGTTGGAGTCCAGATATAGAGACGCGCATCTGGAACACGTGTTTCGTGCCCAGTTGAAGGAACGAGTGCAGCGCGGTAACGAGAACCTCCCACAGTGGGCTTTCGAGGTTGAGAAGTTAGTCGGCAAGGCGAACCGCTCTTCACCTGCCCTTATTGATGGTAACCTGGTGCAAGCATTCATCGACGGTATCCGAGACTCCAGTCAGAGCTGCGGTGCGATTGGGTCATCACGAGGCCCTTAA

Protein

MKANGWSKSHVMTALTLGLREQALTILETLGKDATYEQLVEALESRYRDAHLEHVFRAQLKERVQRGNENLPQWAFEVEKLVGKANRSSPALIDGNLVQAFIDGIRDSSQSCGAIGSSRGP

Uniprot

H9JXZ2   A0A2S4PKQ1   A0A1Y1KUJ8   A0A2C9KZC3   T1EMU9   T1F1S0   + More
T1FBT1   T1FLB2   A0A034V2G1   T1ERN8   A0A1B6EBV0   T1FLI2   T1FDM1   A0A1B6EED3   T1F1N1   T1EUD3   A0A3Q0ITM1   T1FIB4   T1FFS5   A0A310SNN0   T1FFF5   T1FGP7   T1F8U0   A0A023EWI1   T1FJK5   A0A0A9W5I2   T1FFW2   T1EUN5   T1F1D1   T1EPR1   T1FLI8   T1FBS8   A0A1B6HG85   T1F6D3   A0A1B6K8J8   T1FEQ7   A0A1B6MHK7   T1FI89   T1F7U7   T1EV56   T1EQZ4   T1FFV1   T1ERI3   T1F7X8   T1PPT0   A0A2H9T5P4   A0A2J7REY1   T1F9L6   T1EUG7   T1FA86   K9LCE4   A0A087U818   A0A2H9T5I1   A0A034VYS8   A0A1B6LVC0   A0A087TBQ9   A0A0J7JVT9   A0A1B6KFC4   A0A1B6KPQ6   A0A087UIG5   A0A087TBY4   A0A0A9YDH8   A0A0L0BW24   A0A087SUZ9   A0A1B6KFC1   A0A1B6KAB4   A0A087T3I4   A0A2J7PND1   A0A1B6LDH1   W8AVY4   W8AJP1   A0A2J7R0R8   A0A2G8KDS6   A0A1A9VE53   A0A0A9Y0N5   A0A2G8JMV7   A0A0A1WD72   A0A2G8JS73   A0A0K8SSG3   A0A0K8TH95   V4AEN8   A0A260YMM9   A0A087UEM8   K7JZZ1   A0A0A9YIJ1   A0A1A9ZSE9  

Pubmed

19121390    28004739    15562597    23254933    25348373    25474469    + More
25401762    29150518    26108605    24495485    29023486    25830018    20075255   

EMBL

BABH01041732    PEDP01002624    POS82547.1    GEZM01079005    JAV62537.1    AMQM01000050    + More
KB095811    ESO12076.1    AMQM01003259    KB096080    ESO08469.1    AMQM01006081    KB097269    ESN97863.1    AMQM01010234    KB097577    ESN94025.1    GAKP01022625    JAC36327.1    AMQM01000852    KB096742    ESO02334.1    GEDC01001886    JAS35412.1    AMQM01010829    KB095936    ESO09675.1    AMQM01006535    KB097487    ESN96915.1    GEDC01001027    JAS36271.1    AMQM01003246    ESO08416.1    AMQM01001433    KB097495    ESN96614.1    AMQM01008234    AMQM01008235    KB097744    ESN90815.1    AMQM01007172    KB097579    ESN93936.1    KQ762552    OAD55663.1    AMQM01007080    KB097563    ESN94735.1    AMQM01007491    KB097628    ESN93232.1    AMQM01005140    KB096830    ESO01055.1    GBBI01005037    JAC13675.1    AMQM01008746    AMQM01008747    KB095840    ESO11223.1    GBHO01043510    GBHO01043509    GBHO01043507    GBHO01043506    JAG00094.1    JAG00095.1    JAG00097.1    JAG00098.1    AMQM01007184    ESN93988.1    AMQM01001501    KB097571    ESN94169.1    AMQM01003171    KB096023    ESO09130.1    AMQM01000492    AMQM01000493    KB096324    ESO05975.1    AMQM01010853    KB095953    ESO09617.1    AMQM01006079    ESN97860.1    GECU01034034    JAS73672.1    AMQM01004449    KB096551    ESO04038.1    GECU01000203    JAT07504.1    AMQM01006849    KB097528    ESN95383.1    GEBQ01004606    JAT35371.1    AMQM01008217    KB097739    ESN90891.1    AMQM01004859    KB096716    ESO02813.1    AMQM01001610    AMQM01001611    ESN94407.1    AMQM01000727    AMQM01000728    ESO01826.1    AMQM01007178    ESN93966.1    AMQM01000828    ESO02231.1    AMQM01004874    ESO02851.1    KA650088    AFP64717.1    NSIT01000165    PJE78522.1    NEVH01004423    PNF39393.1    AMQM01005413    KB096945    ESO00339.1    AMQM01001452    ESN96681.1    AMQM01005564    KB096983    ESO00299.1    JF835027    AFH54163.1    KK118640    KFM73507.1    NSIT01000173    PJE78480.1    GAKP01011740    JAC47212.1    GEBQ01012350    JAT27627.1    KK114486    KFM62548.1    LBMM01026972    KMQ82254.1    GEBQ01029848    JAT10129.1    GEBQ01026576    JAT13401.1    KK119952    KFM77154.1    KK114513    KFM62623.1    GBHO01014451    JAG29153.1    JRES01001250    KNC24232.1    KK112080    KFM56688.1    GEBQ01029815    JAT10162.1    GEBQ01031607    JAT08370.1    KK113242    KFM59673.1    NEVH01023954    PNF17836.1    GEBQ01018473    JAT21504.1    GAMC01021624    JAB84931.1    GAMC01021622    JAB84933.1    NEVH01008218    PNF34431.1    MRZV01000662    PIK46151.1    GBHO01020524    GBRD01015929    JAG23080.1    JAG49897.1    MRZV01001557    PIK37106.1    GBXI01017626    JAC96665.1    MRZV01001335    PIK38624.1    GBRD01009708    JAG56116.1    GBRD01000849    JAG64972.1    KB202199    ESO91816.1    NIPN01001566    OZF74667.1    KK119487    KFM75817.1    AAZX01013784    GBHO01014259    JAG29345.1   

Proteomes

UP000005204    UP000237438    UP000076420    UP000015101    UP000079169    UP000235965    + More
UP000054359    UP000036403    UP000037069    UP000230750    UP000078200    UP000030746    UP000216463    UP000002358    UP000092445   

PRIDE

H9JXZ2   

Pfam

PF17921   Integrase_H2C2        + More
PF00665   rve
PF00078   RVT_1
PF00098   zf-CCHC
PF17919   RT_RNaseH_2
PF01661   Macro
PF03732   Retrotrans_gag
PF02037   SAP
PF02898   NO_synthase
PF00258   Flavodoxin_1
PF12796   Ank_2
PF05699   Dimer_Tnp_hAT
PF03564   DUF1759
PF14893   PNMA
PF13358   DDE_3
PF01498   HTH_Tnp_Tc3_2

Interpro

IPR036397   RNaseH_sf        + More
IPR041588   Integrase_H2C2       
IPR001584   Integrase_cat-core       
IPR012337   RNaseH-like_sf       
IPR001878   Znf_CCHC       
IPR000571   Znf_CCCH       
IPR036875   Znf_CCHC_sf       
IPR002589   Macro_dom       
IPR001969   Aspartic_peptidase_AS       
IPR001995   Peptidase_A2_cat       
IPR041577   RT_RNaseH_2       
IPR000477   RT_dom       
IPR021109   Peptidase_aspartic_dom_sf       
IPR005162   Retrotrans_gag_dom       
IPR036361   SAP_dom_sf       
IPR000727   T_SNARE_dom       
IPR003034   SAP_dom       
IPR036119   NOS_N_sf       
IPR029039   Flavoprotein-like_sf       
IPR008254   Flavodoxin/NO_synth       
IPR004030   NOS_N       
IPR002110   Ankyrin_rpt       
IPR020683   Ankyrin_rpt-contain_dom       
IPR036770   Ankyrin_rpt-contain_sf       
IPR008906   HATC_C_dom       
IPR005312   DUF1759       
IPR026523   PNMA       
IPR002492   Transposase_Tc1-like       
IPR009057   Homeobox-like_sf       
IPR038717   Tc1-like_DDE_dom       

SUPFAM

SSF53098   SSF53098        + More
SSF50630   SSF50630       
SSF57756   SSF57756       
SSF68906   SSF68906       
SSF56512   SSF56512       
SSF52218   SSF52218       
SSF48403   SSF48403       
SSF46689   SSF46689       

Gene 3D

3.30.420.10     2.40.70.10     1.10.720.30     3.40.50.360     1.25.40.20    

CDD

cd00204  ANK

ProteinModelPortal

H9JXZ2   A0A2S4PKQ1   A0A1Y1KUJ8   A0A2C9KZC3   T1EMU9   T1F1S0   + More
T1FBT1   T1FLB2   A0A034V2G1   T1ERN8   A0A1B6EBV0   T1FLI2   T1FDM1   A0A1B6EED3   T1F1N1   T1EUD3   A0A3Q0ITM1   T1FIB4   T1FFS5   A0A310SNN0   T1FFF5   T1FGP7   T1F8U0   A0A023EWI1   T1FJK5   A0A0A9W5I2   T1FFW2   T1EUN5   T1F1D1   T1EPR1   T1FLI8   T1FBS8   A0A1B6HG85   T1F6D3   A0A1B6K8J8   T1FEQ7   A0A1B6MHK7   T1FI89   T1F7U7   T1EV56   T1EQZ4   T1FFV1   T1ERI3   T1F7X8   T1PPT0   A0A2H9T5P4   A0A2J7REY1   T1F9L6   T1EUG7   T1FA86   K9LCE4   A0A087U818   A0A2H9T5I1   A0A034VYS8   A0A1B6LVC0   A0A087TBQ9   A0A0J7JVT9   A0A1B6KFC4   A0A1B6KPQ6   A0A087UIG5   A0A087TBY4   A0A0A9YDH8   A0A0L0BW24   A0A087SUZ9   A0A1B6KFC1   A0A1B6KAB4   A0A087T3I4   A0A2J7PND1   A0A1B6LDH1   W8AVY4   W8AJP1   A0A2J7R0R8   A0A2G8KDS6   A0A1A9VE53   A0A0A9Y0N5   A0A2G8JMV7   A0A0A1WD72   A0A2G8JS73   A0A0K8SSG3   A0A0K8TH95   V4AEN8   A0A260YMM9   A0A087UEM8   K7JZZ1   A0A0A9YIJ1   A0A1A9ZSE9  

KEGG

105842496    no KO assigned | (RefSeq) protein DDI1 homolog

GO

GO:0003676   GO:0015074   GO:0008270   GO:0004190   GO:0006357   GO:0005634   GO:0050684   GO:0043565   GO:0015095   GO:0016409   GO:0046983   GO:0005524   GO:0003677   GO:0006313  

Length:

121

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.003

Exp number, first 60 AAs:

0.00286

Total prob of N-in:

0.39517

outside

1  -  121

 

 

Pi

0.413969

Theta

4.04599

Tajima's D

-2.416374

CLR

405.922446

CSRT

0.00039998000099995

Interpretation

Possibly Positive selection