Gene

KWMTBOMO02343

Pre Gene Modal

BGIBMGA003570

Annotation

PREDICTED:_uncharacterized_protein_LOC106110672?_partial_[Papilio_polytes]

Location

Bomo_Chr4(-):18570503-18571571      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.97

CDS

ATGGGAGATTTTAACGGTCAGATAGGAAAGCGCAATAACATTGGAGAAGAATACACTATAGAACTGTATGGCTCAGGCAAAATAACTAATAACGGAGAGAGATTAGTGACTTTTGCCTTACAACATAAACTCAGTATTCTTATAAGTTTTTTCAAAAAGAAGGAAAACAAAAAATGGACTTGGACATCCCCAAATGGCATTCATAAAAACGAAATCGATTTTGTCATGTCAAATAATCCTAAGTTTTTCAAGGATGTGTCAATTATCCACAACTTAAATTTCCACTCTGATCATAAAATGGTCCGTGCTGTATTGACTGGGAAACCTATGAAAAGGACAAGGAAGTATCATAACAATAATTCAAGGGTAGTGTGTACGGGAGAAAACGAAGCACTCTCAGCTAATCTCAAATTATTGGCAAAGAAACAACACTTGGATAAAGATTTATCCATTGAAGAAAAATACAATAAGTTCATACAAATATTAAAAGAAGCGACAAGAAAGACTAATACAGAAGATAATAGAGCGATTTCAAAACAAACACAGGAACTACTTCAAGAAAGGAAAAACCTCATTAAAGGAAAGGAGGATAAATATAAAATATCAGAAATTAGTAAGAAGATAAATGAACAAATTAGAAAAGATAGAAAAATTAAACGGAACAGCACTATGGAAAAACACATAGAGAAGACAGGTGGAATTAAAAAGGCTATAAAAGAACTAACAGTAAAAAAGGACTGGATGCCAAAAGTAAAGACTGACAAAAATAACTACACCTGTAAACGACCAGAAATACTGGAGTTGGCTACAGATTATTACAAGAAACTATATAAAAGCAACAAGAGTGGAAGAGCTCAAATAAATGAACTAGAATCTGTAGGAACTAATATCACACCTACAATTTTGACGGAGGAAACATGTATAGCTGCTGGTCGGTAA

Protein

MGDFNGQIGKRNNIGEEYTIELYGSGKITNNGERLVTFALQHKLSILISFFKKKENKKWTWTSPNGIHKNEIDFVMSNNPKFFKDVSIIHNLNFHSDHKMVRAVLTGKPMKRTRKYHNNNSRVVCTGENEALSANLKLLAKKQHLDKDLSIEEKYNKFIQILKEATRKTNTEDNRAISKQTQELLQERKNLIKGKEDKYKISEISKKINEQIRKDRKIKRNSTMEKHIEKTGGIKKAIKELTVKKDWMPKVKTDKNNYTCKRPEILELATDYYKKLYKSNKSGRAQINELESVGTNITPTILTEETCIAAGR

Cofactor

Fe(2+)

Similarity

Belongs to the mitochondrial carrier (TC 2.A.29) family.
Belongs to the carotenoid oxygenase family.

Uniprot

A0A2W1BNL4   A0A2H1VBB6   D7F179   A0A2H1X3Z9   A0A0L7LC08   A0A0L7K2L1   + More
D7F178   D7F176   A0A2A4JIH6   D7F177   A0A2H1WF27   A0A0L7KR57   A0A023EXV2   D7F159   A0A131XMC8   A0A023GFX8   T1HR22   A0A1W4UBD7   D7F165   D7F164   A0A016TK11   A0A016SG46   A0A016W4R1   A0A016ULA1   A0A0L7LVR9   D7F157   A0A2W1BZV1   A0A0L7LL03   A0A0L7L657   D7F158   A0A0L7LQ33   A0A016V9Q8   A0A016THQ0   A0A016TNL5   A0A131ZDH5   A0A3P9KP93   A0A069DZM5   A0A131YWK0   A0A016W0A5   W6N9K0   A0A016V4Q8   A0A016WTM3   A0A016V419   A0A1S3HCU5   A0A2W5U8K4   A0A2H1VS24   A0A1I7Y0E1   A0A3P9HFJ3   A0A2H2J8Y1   A0A023EWU8   A0A069DX96   A0A016VJ99   A0A2H2IXA5   A0A016TV24   A0A016VK03   A0A2H2J0Y8   A0A016TTW5   A0A016TT80   A0A2H2J633   A0A2H2J8F3   A0A2H2IZ26   A0A2H2JGC3   A0A2G9UVW6   A0A016TU14   A0A2H2J184   K7HGJ3   A0A2H2IYX5   K7HGJ4   A0A2H2JJW9   A0A2H2JIE5   A0A0P4VWD0   A0A2H2JGP6   A0A016S1D2   A0A2H2ICN7   A0A2H2J4H2   A0A2H2JMI7   A0A2H2J2K4   K7I444   K7IKP4   A0A2H2JDV9   K7I443   A0A2Q4SIQ7  

Pubmed

28756777    20470440    26227816    25474469    28049606    25730766    + More
26830274    17554307    26334808    26392177    27129103   

EMBL

KZ150049    PZC74456.1    ODYU01001637    SOQ38140.1    FJ265564    ADI61832.1    + More
ODYU01013311    SOQ60019.1    JTDY01001738    KOB73037.1    JTDY01014306    KOB52041.1    FJ265563    ADI61831.1    FJ265561    ADI61829.1    NWSH01001447    PCG71212.1    FJ265562    ADI61830.1    ODYU01008249    SOQ51673.1    JTDY01006707    KOB65758.1    GBBI01004876    JAC13836.1    FJ265544    ADI61812.1    GEFH01000854    JAP67727.1    GBBM01003763    JAC31655.1    ACPB03015413    FJ265550    ADI61818.1    FJ265549    ADI61817.1    JARK01001676    JARK01001446    JARK01001433    EYB83199.1    EYC01126.1    EYC02928.1    JARK01001565    EYB89683.1    JARK01001337    EYC34625.1    JARK01001372    EYC15676.1    JTDY01000008    KOB79474.1    FJ265542    ADI61810.1    KZ149907    PZC78256.1    JTDY01000715    KOB76117.1    JTDY01002682    KOB70937.1    FJ265543    ADI61811.1    JTDY01000361    KOB77547.1    JARK01001351    EYC23458.1    JARK01001435    EYC02484.1    JARK01001424    EYC04321.1    GEDV01000266    JAP88291.1    GBGD01000380    JAC88509.1    GEDV01005625    JAP82932.1    JARK01001338    EYC33045.1    CAVP010052198    CDL93746.1    JARK01001354    EYC21713.1    JARK01000126    EYC42577.1    EYC21986.1    QFQQ01000179    PZR20596.1    ODYU01004088    SOQ43598.1    GBBI01004877    JAC13835.1    GBGD01000453    JAC88436.1    JARK01001345    EYC27376.1    JARK01001413    EYC06243.1    EYC27377.1    EYC06245.1    EYC06244.1    KZ345286    PIO74399.1    EYC06246.1    GDKW01001596    JAI54999.1    JARK01001655    EYB84321.1   

Proteomes

UP000037510    UP000218220    UP000015103    UP000192221    UP000024635    UP000265180    + More
UP000025227    UP000085678    UP000095287    UP000265200    UP000005237   

PRIDE

D7F179    D7F178    D7F176    D7F177    D7F159    D7F165    + More
D7F164    D7F157    D7F158   

Pfam

PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1
PF03372   Exo_endo_phos
PF00153   Mito_carr
PF03055   RPE65

Interpro

IPR027124   Swc5/CFDP2        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR000477   RT_dom       
IPR018108   Mitochondrial_sb/sol_carrier       
IPR023395   Mt_carrier_dom_sf       
IPR016186   C-type_lectin-like/link_sf       
IPR016187   CTDL_fold       
IPR004294   Carotenoid_Oase       

SUPFAM

SSF56219   SSF56219        + More
SSF103506   SSF103506       
SSF56436   SSF56436       

Gene 3D

3.60.10.10     1.50.40.10     3.10.100.10    

ProteinModelPortal

A0A2W1BNL4   A0A2H1VBB6   D7F179   A0A2H1X3Z9   A0A0L7LC08   A0A0L7K2L1   + More
D7F178   D7F176   A0A2A4JIH6   D7F177   A0A2H1WF27   A0A0L7KR57   A0A023EXV2   D7F159   A0A131XMC8   A0A023GFX8   T1HR22   A0A1W4UBD7   D7F165   D7F164   A0A016TK11   A0A016SG46   A0A016W4R1   A0A016ULA1   A0A0L7LVR9   D7F157   A0A2W1BZV1   A0A0L7LL03   A0A0L7L657   D7F158   A0A0L7LQ33   A0A016V9Q8   A0A016THQ0   A0A016TNL5   A0A131ZDH5   A0A3P9KP93   A0A069DZM5   A0A131YWK0   A0A016W0A5   W6N9K0   A0A016V4Q8   A0A016WTM3   A0A016V419   A0A1S3HCU5   A0A2W5U8K4   A0A2H1VS24   A0A1I7Y0E1   A0A3P9HFJ3   A0A2H2J8Y1   A0A023EWU8   A0A069DX96   A0A016VJ99   A0A2H2IXA5   A0A016TV24   A0A016VK03   A0A2H2J0Y8   A0A016TTW5   A0A016TT80   A0A2H2J633   A0A2H2J8F3   A0A2H2IZ26   A0A2H2JGC3   A0A2G9UVW6   A0A016TU14   A0A2H2J184   K7HGJ3   A0A2H2IYX5   K7HGJ4   A0A2H2JJW9   A0A2H2JIE5   A0A0P4VWD0   A0A2H2JGP6   A0A016S1D2   A0A2H2ICN7   A0A2H2J4H2   A0A2H2JMI7   A0A2H2J2K4   K7I444   K7IKP4   A0A2H2JDV9   K7I443   A0A2Q4SIQ7  

KEGG

NA   

GO

GO:0003964   GO:0004519   GO:0016021   GO:0022857   GO:0016702   GO:0046872  

PANTHER

PTHR23227   PTHR10543  

Length:

312

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00681

Exp number, first 60 AAs:

0.00681

Total prob of N-in:

0.01545

outside

1  -  312

 

 

Pi

2.75497

Theta

7.330723

Tajima's D

-1.756536

CLR

1.84507

CSRT

0.0277486125693715

Interpretation

Uncertain