Silkworm Genome Informatics Database

Gene

KWMTBOMO02335

Pre Gene Modal

BGIBMGA003794

Annotation

Endonuclease-reverse_transcriptase_[Operophtera_brumata]

Location

Bomo_Chr4(+):18263878-18267969 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.143

CDS

ATGTCTGGTGTCAGGACAGTAGACGTCCAGGCCGTCGAAGGGATGGTGGCACAGTTCCCCTGCGACCTTGGAACGGCAGCCAACGATAAAGTCTACATGGTATTCTGGTTCAGAGATGATGCTGGAATACCACTGTACAGATCATCTGGACGCAGTGACCAAAATCTCAAGCCAATCTCAAACGGTCTCACACCTCCAATTTCGACTAAACCGAAAACAATCCTCGACCCTAAGGAGTCAGATTTATCCCATACATCAAAACTAATGTAG

Protein

MSGVRTVDVQAVEGMVAQFPCDLGTAANDKVYMVFWFRDDAGIPLYRSSGRSDQNLKPISNGLTPPISTKPKTILDPKESDLSHTSKLM

Uniprot

A0A0L7L348 A0A0L7KKW3 A0A1I8NLN2

Pubmed

26227816

EMBL

JTDY01003239 KOB69897.1 JTDY01009285 KOB63745.1

Proteomes

UP000037510 UP000095300

Interpro

IPR013783 Ig-like_fold + More
IPR036179 Ig-like_dom_sf

SUPFAM

SSF48726 SSF48726

Gene 3D

2.60.40.10

ProteinModelPortal

A0A0L7L348 A0A0L7KKW3 A0A1I8NLN2

KEGG

101741569 no KO assigned | (RefSeq) nephrin-like

GO

GO:0003964 GO:0004519

Length:

89

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04643

Exp number, first 60 AAs:

0.04643

Total prob of N-in:

0.45019

outside

1 - 89

Pi

30.106507

Theta

26.995139

Tajima's D

0.036428

CLR

1.887019

CSRT

0.386830658467077

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics