Gene

KWMTBOMO02333

Annotation

PREDICTED:_uncharacterized_protein_LOC105664173_[Megachile_rotundata]

Location

Bomo_Chr4(-):18185414-18186507      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.979

CDS

ATGGAGAAATTAAGATTTGATTTTACAATGAAATCAATGGCGGATGGAAAAACAAACGTCATATGCATAACTTCCATTGCTACACAAAGTGGACAAGTTTTTGGAATTCCAGTCGAATATCAACCCGTAAATCTTCATAAGGTGATCACAACTACTCCTAACTACACCAGAGTAAAAAACTCTTTAGTAAAAAGGCATCAAACGAGGAAAATATGTATAACTGTGACGGAGGAAATTTCAAAAACATATTTGGATGAAGAACAAAATTTGCAATTCAATGATTGTTATTTGGAAGAGATTTCAGAACAACCTGTTAGTTATGAATCGACATCTAGTAATTCTAATCACATGCTTGAAAAACTGTTAGAAAAACTACAAGAACAAAAACAGCAGAAACCAGAAAAACAAAATTTAGGGAAAATTGCAAAGGATTTTATTATAGAAAAATTCAACGGCCGTAATTCAAATGCATTACAGTGGATCAAAGATTTTAATAAAGAATGTGAACGTTTTCAAATAAACGAGGATAAACAAAAAATTGAAATTTTGAAGAACTTCTTAGAAAACGCTAGTGTAGATTGGTATAGTTGTATGCTGATGAAGCTTACAGTACAATCAGAATGGAGCAAATGGGAGAAAATTTTCTGTGAGACATTTGCGAACAAAGGATGGTCCTCCACTAGATATGCTCTTGCCTTTAAATATCAATCGGGATCCTTGCTTGAGTATGCTTTAAAGAAGGAGAAATTATTGTTGGAAGTCAGACAGTGGATACCGGAACAATTATTGATCTCATAG

Protein

MEKLRFDFTMKSMADGKTNVICITSIATQSGQVFGIPVEYQPVNLHKVITTTPNYTRVKNSLVKRHQTRKICITVTEEISKTYLDEEQNLQFNDCYLEEISEQPVSYESTSSNSNHMLEKLLEKLQEQKQQKPEKQNLGKIAKDFIIEKFNGRNSNALQWIKDFNKECERFQINEDKQKIEILKNFLENASVDWYSCMLMKLTVQSEWSKWEKIFCETFANKGWSSTRYALAFKYQSGSLLEYALKKEKLLLEVRQWIPEQLLIS

Uniprot

A0A151WVN1   A0A0L7K2E5   A0A0L7KNW2   T1EWY2   A0A0L7KTG0   A0A0L7LFA7   + More
T1EV26   A0A0J7MXJ2   A0A0J7MQ89   T1F604   A0A0N1IPG9   A0A0N1IGA9   J9KFL5   J9LXS8   E9IGZ4   A0A212FE51   A0A2H1W8H0   A0A151IGM2   T1FA65   A0A0Q9XH33   T1EYI6   T1HT13   A0A1B6DSS3   A0A151IZ78   A0A151INU2   A0A151IJA3   A0A2R7W771   A0A2R7WSP7   A0A2R7WV80   T1ETF9   T1F4I2   T1F5V9   T1F8U8   T1FLR0   T1F4L2   A0A2R7VVB8   T1EUP0   K7JVX9   E9IYB6   T1F9Q3   T1EXJ6   T1FA03   A0A151INN8   A0A443QDD2   A0A3S3NS01  

Pubmed

26227816    23254933    26354079    21282665    22118469    17994087    + More
20075255   

EMBL

KQ982715    KYQ51731.1    JTDY01017365    KOB51853.1    JTDY01008086    KOB64751.1    + More
AMQM01002082    KB097700    ESN91473.1    JTDY01005843    KOB66552.1    JTDY01001358    KOB74090.1    AMQM01001573    AMQM01001574    KB097571    ESN94358.1    LBMM01014575    KMQ85130.1    LBMM01023341    KMQ82740.1    AMQM01004377    KB096502    ESO04465.1    KQ460499    KPJ14273.1    KQ460501    KPJ14173.1    ABLF02008319    ABLF02039706    GL763118    EFZ20161.1    AGBW02008978    OWR52011.1    ODYU01007023    SOQ49389.1    KQ977673    KYN00612.1    AMQM01005555    KB096983    ESO00269.1    CH933817    KRG07776.1    AMQM01002557    AMQM01002558    AMQM01002559    KB095812    ESO11752.1    ACPB03003915    GEDC01029643    GEDC01008571    GEDC01007985    JAS07655.1    JAS28727.1    JAS29313.1    KQ980716    KYN14207.1    KQ976913    KYN07139.1    KQ977377    KYN03200.1    KK854406    PTY15552.1    KK855443    PTY22588.1    KK855666    PTY23463.1    AMQM01001240    KB097143    ESN99416.1    AMQM01003909    KB096365    ESO05283.1    AMQM01004332    ESO04369.1    AMQM01005146    KB096830    ESO01074.1    AMQM01011378    KB096295    ESO06747.1    AMQM01003919    AMQM01003920    ESO05345.1    KK854101    PTY11289.1    AMQM01001502    ESN94174.1    AAZX01023363    GL766977    EFZ14439.1    AMQM01005441    KB096945    ESO00403.1    AMQM01002230    AMQM01002231    KB097753    ESN90333.1    AMQM01005502    ESO00169.1    KQ976921    KYN07071.1    NCKU01010003    RWS01022.1    NCKU01005203    RWS04879.1   

Proteomes

UP000075809    UP000037510    UP000015101    UP000036403    UP000053240    UP000007819    + More
UP000007151    UP000078542    UP000009192    UP000015103    UP000078492    UP000002358    UP000285301   

Pfam

PF17921   Integrase_H2C2        + More
PF17919   RT_RNaseH_2
PF17917   RT_RNaseH
PF00078   RVT_1

Interpro

IPR012337   RNaseH-like_sf        + More
IPR041588   Integrase_H2C2       
IPR036397   RNaseH_sf       
IPR021109   Peptidase_aspartic_dom_sf       
IPR041577   RT_RNaseH_2       
IPR041373   RT_RNaseH       
IPR000477   RT_dom       

SUPFAM

SSF53098   SSF53098        + More
SSF50630   SSF50630       

Gene 3D

3.30.420.10     2.40.70.10    

ProteinModelPortal

A0A151WVN1   A0A0L7K2E5   A0A0L7KNW2   T1EWY2   A0A0L7KTG0   A0A0L7LFA7   + More
T1EV26   A0A0J7MXJ2   A0A0J7MQ89   T1F604   A0A0N1IPG9   A0A0N1IGA9   J9KFL5   J9LXS8   E9IGZ4   A0A212FE51   A0A2H1W8H0   A0A151IGM2   T1FA65   A0A0Q9XH33   T1EYI6   T1HT13   A0A1B6DSS3   A0A151IZ78   A0A151INU2   A0A151IJA3   A0A2R7W771   A0A2R7WSP7   A0A2R7WV80   T1ETF9   T1F4I2   T1F5V9   T1F8U8   T1FLR0   T1F4L2   A0A2R7VVB8   T1EUP0   K7JVX9   E9IYB6   T1F9Q3   T1EXJ6   T1FA03   A0A151INN8   A0A443QDD2   A0A3S3NS01  

KEGG

NA   

GO

GO:0003676  

Length:

265

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0992299999999999

Exp number, first 60 AAs:

0.09902

Total prob of N-in:

0.03249

outside

1  -  265

 

 

Pi

3.883158

Theta

19.236997

Tajima's D

-1.532932

CLR

56.867268

CSRT

0.0540972951352432

Interpretation

Uncertain