SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02330
Pre Gene Modal
BGIBMGA003791
Annotation
hypothetical_protein_KGM_02137_[Danaus_plexippus]
Location in the cell
Cytoplasmic   Reliability : 1.715 Nuclear   Reliability : 2.075
 

Sequence

CDS
ATGACCGTTTTCACGAAGCCCAGTCTCAACGCTCACAAGCCTGAGGCCATTGCCGACCAATTATGTGAAGATGAGCTGATCGATATGCACAACATCGAGGGCCCTTACATCATGAGGAAGCGTTCCGCTACTATGCTGGTGTGTATGTTCCTCATGGCGTTAGTGGTGGCCGCGACCAGCATTGCAGGTGGCGTGCTCTTGTACCGTCAGTACGTGAGAATCGGCACCGTACGACGATACCAGGGCTTCTGTACCATACCCATTTCTACTAGGGACTCGCAATTAATGGAACCAAACTTCCGCACAATGCCTCTTCGTTGGTCCAACGAGCCTGATGTGCAGATTGTGAGCACTTTAGACGAGGCCGCCACTGACCAGCTGATCACGGCGCTGCGTGAGGAACTGGACATCGGGGAGACCGTCGAAAAGATCTCTGTCATTGACAATGGCCGCCGCATTCATTTCATTCATGATTTCCAAACTAATACAACTGGCATCATCGACTCGGACCGTTGCTTCACGATGGAGCTCCAGCCCGAGCTGGTGCTGCTGCCGGGTATGCTGGCGTCGGGGCTGCAGCGCGGGGACGCGTTCGACGTGACCCGCGTGCGCTCGTCGCTGCGCGCGCTGCTGCCGGCGCTCACGGACCTGCCCGACGGCGGCCTGCTGCTCGACGACTGCAACCAGAAACCGGTCTACCGCTTGGAGAAGGACGACCAACCCATGATTCGCAAACGTTCAGTAGACGCGTTGTCTCACGACTACATCCATTTCTCGGGTCGGCACGTCCAGGAGATAGAGATCTCCAACTTGGCCCAGCTGCTGCAGCAGGAGCAGAAGGCCAATCAACCCTAA
Protein
MTVFTKPSLNAHKPEAIADQLCEDELIDMHNIEGPYIMRKRSATMLVCMFLMALVVAATSIAGGVLLYRQYVRIGTVRRYQGFCTIPISTRDSQLMEPNFRTMPLRWSNEPDVQIVSTLDEAATDQLITALREELDIGETVEKISVIDNGRRIHFIHDFQTNTTGIIDSDRCFTMELQPELVLLPGMLASGLQRGDAFDVTRVRSSLRALLPALTDLPDGGLLLDDCNQKPVYRLEKDDQPMIRKRSVDALSHDYIHFSGRHVQEIEISNLAQLLQQEQKANQP

Summary

EMBL
BABH01034508    BABH01034509    BABH01034510    BABH01034511    AGBW02014991    OWR40775.1    + More
GDQN01004119    JAT86935.1    KQ458860    KPJ04786.1    NWSH01000225    PCG78227.1    KQ461191    KPJ07075.1    ODYU01001320    SOQ37351.1    GEFH01003342    JAP65239.1    GGLE01003453    MBY07579.1    GFAH01000298    JAV48091.1    GFPF01009134    MAA20280.1    GEDV01009022    JAP79535.1    GBBM01006593    JAC28825.1    NEVH01013216    PNF29660.1    GACK01005631    JAA59403.1    GFTR01004911    JAW11515.1    JO842706    AEO34323.1    GANP01008779    JAB75689.1    GEFM01000374    JAP75422.1    GFAC01000188    JAT99000.1    GAHY01000027    JAA77483.1    GDKW01000380    JAI56215.1    IAAA01003482    IAAA01003483    LAA00483.1    IAAA01003481    LAA00478.1    GFWV01020220    MAA44948.1    KK853149    KDR10662.1    GANP01008778    JAB75690.1    KQ971342    EFA03700.1    GFAA01000552    JAU02883.1    GBBK01003120    JAC21362.1    GBGD01002244    JAC86645.1    GANP01013230    JAB71238.1    GBBI01001454    JAC17258.1    DS235778    EEB16876.1    GFWZ01000160    MBW20150.1    KK115527    KFM65352.1    GANP01013229    JAB71239.1    LNIX01000016    OXA45882.1    CAEY01000737    JXUM01069303    JXUM01069304    JXUM01069305    JXUM01069306    JXUM01069307    GAPW01002661    KQ562545    JAC10937.1    KXJ75651.1    AK418014    BAN21229.1    UFQS01001049    UFQT01001049    SSX08710.1    SSX28622.1    GECZ01029651    JAS40118.1    GEZM01007024    JAV95473.1    UFQT01000560    SSX25317.1    GFDL01007385    JAV27660.1    GFDL01007277    JAV27768.1    GBYB01005022    JAG74789.1    CH963920    KRF98723.1    GEBQ01031063    JAT08914.1    GBBK01001614    JAC22868.1    GFDL01007477    JAV27568.1    EDW77703.1    GBHO01043085    GBHO01043082    GBHO01043081    GDHC01001693    JAG00519.1    JAG00522.1    JAG00523.1    JAQ16936.1    GDAI01001255    JAI16348.1    GDHC01016425    GDHC01004167    JAQ02204.1    JAQ14462.1    GBHO01043086    GBHO01043084    GBHO01043083    GBRD01009172    JAG00518.1    JAG00520.1    JAG00521.1    JAG56649.1    CH933807    EDW13058.1    GBYB01005023    JAG74790.1    GFDL01007400    JAV27645.1    GFDL01007414    JAV27631.1    DS232149    EDS36094.1    KK107119    EZA58658.1    QOIP01000009    RLU18277.1    CH379060    EAL33808.2    CH479180    EDW29037.1    CCAG010015647    EZ422214    ADD18490.1    GDHF01017422    JAI34892.1    JXJN01018931    KQ434943    KZC12232.1    AJVK01011496    AJVK01011497    KY563415    ARK19824.1    GAKP01006011    JAC52941.1    GBYB01004204    JAG73971.1    LJIJ01000016    ODN05791.1    GAMC01016077    GAMC01016076    JAB90478.1    AXCN02000831    CH954177    EDV57277.1    OUUW01000004    SPP79129.1    GEDC01028583    JAS08715.1    MWRG01000269    PRD36626.1    NNAY01002581    OXU20998.1    KQ435759    KOX75693.1    CH916368    EDW03456.1    AE014134    ABC65865.1    KQ414714    KOC62938.1    AY069416    AAL39561.1    CM000157    EDW87186.1    CM002910    KMY87375.1   
Pfam
PF04089   BRICHOS
Interpro
IPR040145   ITM2        + More
IPR007084   BRICHOS_dom       

Ontologies

Topology

Length:
284
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.84186
Exp number, first 60 AAs:
15.10558
Total prob of N-in:
0.85598
POSSIBLE N-term signal
sequence
inside
1  -  45
TMhelix
46  -  68
outside
69  -  284
 
 

Population Genetic Test Statistics

Pi
18.522765
Theta
20.325955
Tajima's D
-0.613866
CLR
17.025791
CSRT
0.217539123043848
Interpretation
Uncertain
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