SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02321  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003787
Annotation
hypothetical_protein_KGM_02132_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 2.982
 

Sequence

CDS
ATGAAGTCCGTGTTGACTTATATACGCGGTCTTCTTGGTTGGGTTGATGAAAATCCAACCCTTAGGACAAGTTTCAAACGCGACAGGGCCGACGATGAATACTCTTCAGATGAAGAATTACCAGCATTAAAGCGCGTTAAACAGTTAAAAAGAACAAACTTCCCAGATATTATGACTTCAAAAGATTCAGTTTCTTGGGAGAAAAATGGAAAAAATAGTAAAACCGTTCGTTATGTGCCAATACAATTGGAGGCTGGTCACCCGAGTACATCAACTCCAATTGAACCTGTGAATCAGGGGAGCAGGATCCGAAATGTACCAATTAAATACATACCAGTATTGGAGAATGGATCAGGGACTCCAGCACGGAAACCAAGGATACACACACCAGTGCGCCCAGTCATTAATTGCGCTGATGATGATGATGATGATGATGAGGCTGGGAGTGAGCTTATCCATGTAATTAACTATGAGGCTTGGGACACATCCTTGGTCAAAGTATCTATATCTCTAAAGATAATTGGTATTTAG
Protein
MKSVLTYIRGLLGWVDENPTLRTSFKRDRADDEYSSDEELPALKRVKQLKRTNFPDIMTSKDSVSWEKNGKNSKTVRYVPIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYIPVLENGSGTPARKPRIHTPVRPVINCADDDDDDDEAGSELIHVINYEAWDTSLVKVSISLKIIGI

Summary

Pfam
PF02902   Peptidase_C48
Interpro
IPR038765   Papain-like_cys_pep_sf        + More
IPR003653   Peptidase_C48_C       
SUPFAM
SSF54001   SSF54001       

Ontologies

Topology

Length:
176
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00028
Exp number, first 60 AAs:
0.00017
Total prob of N-in:
0.16956
outside
1  -  176
 
 

Population Genetic Test Statistics

Pi
13.699653
Theta
11.220494
Tajima's D
-0.495855
CLR
0.578046
CSRT
0.244887755612219
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号