SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02318
Pre Gene Modal
BGIBMGA003763
Annotation
hypothetical_protein_KGM_19682_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 3.401
 

Sequence

CDS
ATGGAAGTGAGGGTCAGGGCGGCTGGTCTTCGAACTACGTTGGTCTTAGACGACGACGCCAGGCCGGCGGCACTGCAAGCTTGTCATCCAAAAGGATATTCTAAATTCTCGCTGCAGATGCGTCCCGGTGGTCTGGTGAAGATATACGACTCGGCGCTGATGTCCTCGTCCCAGTACAAGTGCATCCTCACGAGCGAGCGTACAACAGCTGACGAGCTACTGGCCATTCTGTTGCATTGCTACGACTCGACCGAAGGCGTCGAGCGGTTCTCCTTGTACGAGGTGTATCCATCACAAGAATACGAGCGAAAGCTCCATCCAGACGATCTGCCCCTATTGGTGCAACGGGCCTGGCCCCCTGAGAGCGACTGCCATTTCCGTGTGCGGCGGAACCCTCGCGTACCCCCTCCGCCCCCCGCTGCCTCCGTTGGCACCCCACATGCCGCACACCTCGCCTCCTCCCTCCCATCACTCGATGAACCCTCCCGGGCCCTCTCTGCGCTGTCGTTAGAATCAGACGACAAACGATACAGTCCTGTATACAAATTCCCAAGCATAACATATTGCCAGGAAACAAAAAACGATTATCTATACATTTGA
Protein
MEVRVRAAGLRTTLVLDDDARPAALQACHPKGYSKFSLQMRPGGLVKIYDSALMSSSQYKCILTSERTTADELLAILLHCYDSTEGVERFSLYEVYPSQEYERKLHPDDLPLLVQRAWPPESDCHFRVRRNPRVPPPPPAASVGTPHAAHLASSLPSLDEPSRALSALSLESDDKRYSPVYKFPSITYCQETKNDYLYI

Summary

Pfam
PF00788   RA
Interpro
IPR029071   Ubiquitin-like_domsf        + More
IPR000159   RA_dom       
SUPFAM
SSF54236   SSF54236       
PDB
5KHQ     E-value=0.0408027,     Score=82

Ontologies

Topology

Length:
199
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00015
Exp number, first 60 AAs:
0.00015
Total prob of N-in:
0.10880
outside
1  -  199
 
 

Population Genetic Test Statistics

Pi
30.181603
Theta
28.568292
Tajima's D
0.173672
CLR
1.413913
CSRT
0.422578871056447
Interpretation
Uncertain
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