Gene

KWMTBOMO02317

Pre Gene Modal

BGIBMGA003786

Annotation

PREDICTED:_voltage-dependent_L-type_calcium_channel_subunit_beta-2_[Amyelois_transitella]

Location

Bomo_Chr4(+):17626912-17640286      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.077

CDS

ATGTGTTTGTTTGTTGTTTTCCAGGGCTCCGCGGAGTCGAATTGTTCGCAGCCGTCGTCGGAGCTGTCGCTGGACGATGACAAGGAGGCGCTGCGCAGAGAAAAGGAAGCGCAGGCTCTCTCACAGCTGGATAAGGCGAGGTCAAAGCCGGTCGCGTTCGCCGTCCGCACGAACGTCGCTTACGACGCGAAGATCGACGACGACTCGCCCGTGCACGGCACCGCCATCTCCTTCGACGTTCGAGACTTCCTGCACATTAAGGAGAAGTACGACAACAACTGGTGGATCGGTCGGCTCGTGGCGGAGAACTCTGACATAGGGTTCATCCCGTCCCCCGTGAAGCTGGAGATGGTGCGCGCGGGGCTGGCCGCCAGGGGCCGCTCCGCGCTCGCCGCCCACCCCCACTCCCGAGGTAGCACTCCCCCCACGCCCGGTGACGAATCCGACTCGGCGGGCAGGGGGCGCGGGGCGGGCGCGCTGCCCGCTGGCAAGGAAAAGAAGAAGCCATTCTTCAAGAAGCAGGAGGCCTGCACTCCGTACGACGTGGTGCCCTCGATGAGGCCGGTCGTCCTCGTGGGGCCCTCGCTCAAAGGATACGAAGTCACGGACATGATGCAGAAGGCGCTTTTTGATTTCTTAAAAAGGCGCTTCGAAGGACGGATAATAATAACGAGGGTGATGGCGGACATATCGCTGGCGAAGCGCTCGCTGCTCAACAACCCCTCCAAGAGGGCCATCATGGAGCGCTCCAACTCGCGCTCCACCTGCCTGGCCGAGGTGCAGGCTGAAATCGAGAGGATATTCGACCTAGCGCGGACCCTGCAGCTGGTGGTGCTGGACTGCGACACCATCAACCACCCGTCGCAACTGGCCAAGACCTCACTAGCGCCCACTATCGTCTACTTAAAGATCACCAGCCCCAAGGTGCTGCAGCGATTGATCAAGTCCCGGGGCAAGGGCCAGACCAAGAACCTGTCCGTGCAAATGGTGGCGGCCGAGAAGCTGTCGCAGTGTCCCAAGGAGATGTTCGACCTCGTGCTGGACGAAAACCAGCTGGAGGACGCCTGCGACCGCATCGCAGAGCATCTGGAGAAGTACTGGCGCGCCACGCACCCCCCAGCCGCCGCCCCGCTGGCGCCGCCCGCCGCCCCCCGCGCGCACCTCGCCCCCCTGCCCCACCTCGCGCACCTCGCGCACGCCCAGCCCGTACAAGCGTCTGGCGGGCGAGCCCGCGGGCCGCGCCCCGAGCGGCTGGAGGAGGAGTACTACGGGCGGGAGCGGTACGCGCGCGAGTACGAGTACGGACACGACTACACGCGCCGCGACCCCGACGCCGACGAGTACGGGCCCTCGCGCCGAGCGCTCAACGCTGTCTAG

Protein

MCLFVVFQGSAESNCSQPSSELSLDDDKEALRREKEAQALSQLDKARSKPVAFAVRTNVAYDAKIDDDSPVHGTAISFDVRDFLHIKEKYDNNWWIGRLVAENSDIGFIPSPVKLEMVRAGLAARGRSALAAHPHSRGSTPPTPGDESDSAGRGRGAGALPAGKEKKKPFFKKQEACTPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKRRFEGRIIITRVMADISLAKRSLLNNPSKRAIMERSNSRSTCLAEVQAEIERIFDLARTLQLVVLDCDTINHPSQLAKTSLAPTIVYLKITSPKVLQRLIKSRGKGQTKNLSVQMVAAEKLSQCPKEMFDLVLDENQLEDACDRIAEHLEKYWRATHPPAAAPLAPPAAPRAHLAPLPHLAHLAHAQPVQASGGRARGPRPERLEEEYYGRERYAREYEYGHDYTRRDPDADEYGPSRRALNAV

Uniprot

A0A2A4JPC1   A0A2A4JP69   A0A212EML9   A0A2A4JNF4   A0A194QH78   V9IAN0   + More
A0A087ZMZ3   A0A1Y1KBK3   A0A1Y1K7U2   A0A1Y1K818   A0A1Y1KFL1   A0A1Y1KD44   A0A1Y1K833   T1SG89   A0A1Y1KFK1   A0A1Y1KDR8   A0A1Y1K802   A0A139WHQ7   A0A1B0CUU4   A0A139WHE7   A0A1I8PM22   A0A026W8H4   E2ASH3   Q7M3V8   A0A154P7Q5   A0A0A1XKZ5   K7INI2   A0A195D0B8   A0A034WNH0   A0A034WNG5   A0A0K8TXP2   A0A034WLT2   A0A336N317   A0A336MYH7   A0A0Q9X6P7   A0A0K8WDX8   A0A0R1DKW6   N6TM54   A0A0Q9WJQ1   W8BJL5   A0A034WIC8   A0A1W4W4Z8   A0A1W4W449   A0A0J9R0P5   A0A195D8K3   Q7KTE8   A0A034WMC0   A0A0Q5WHL4   A0A151WYC9   A0A0J9R089   A0A0Q9X637   A0A0R3NSR7   A0A0Q9W8L1   M9PD84   A0A0Q5WAT6   W8CB80   A0A1B0G029   A0A195B8Z5   A0A0R1DSD5   A0A0Q9XD98   V9IA55   T1SG87   A0A1W4VSX4   W8BJL9   A0A1A9XE24   A0A0Q9WJJ8   A0A3B0JAW8   B4MWD8   A0A2A4JPH6   W8C560   A0A2A4JQC5   T1SG86   A0A1B0A0R7   A0A1A9UIL1   A0A1I8PLY9   A0A1I8PLX9   A0A1I8PM12   A0A1I8PLU1   A0A1I8PLY4   A0A1I8PM04   A0A1W4VSU5   A0A0Q9W8N5   A0A0R3NTE8   T1PHY8   A0A2A4JNJ5   A0A0Q5WA93   A0A0J9R1K8   M9PFL4   A0A0Q5WJW1   B3N4K0   A0A0R3NTM1   A0A0R3NTB1   A0A0Q9WIH9   B4KHA4   A0A0Q5WNZ7   Q29M31   A0A034WKZ1   A0A1I8PLV3   A0A1Q3FZK5   A0A0J9R1L8  

Pubmed

22118469    26354079    28004739    23588376    18362917    19820115    + More
24508170    20798317    8089136    25830018    20075255    25348373    17994087    17550304    23537049    24495485    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    15632085   

EMBL

NWSH01000903    PCG73606.1    PCG73609.1    AGBW02013812    OWR42733.1    PCG73605.1    + More
KQ458860    KPJ04774.1    JR037014    AEY57526.1    GEZM01089342    GEZM01089340    JAV57540.1    GEZM01089350    JAV57532.1    GEZM01089348    JAV57534.1    GEZM01089339    GEZM01089332    JAV57547.1    GEZM01089347    JAV57535.1    GEZM01089336    JAV57544.1    JX997993    AGT38440.1    GEZM01089344    JAV57537.1    GEZM01089335    GEZM01089334    JAV57546.1    GEZM01089349    JAV57533.1    KQ971343    KYB27419.1    AJWK01029657    AJWK01029658    KYB27418.1    KK107347    EZA52355.1    GL442298    EFN63639.1    KQ434822    KZC07160.1    GBXI01010712    GBXI01002732    JAD03580.1    JAD11560.1    KQ977012    KYN06363.1    GAKP01003634    JAC55318.1    GAKP01003639    GAKP01003637    GAKP01003635    JAC55313.1    GDHF01033253    GDHF01010658    JAI19061.1    JAI41656.1    GAKP01003640    JAC55312.1    UFQT01004028    SSX35443.1    SSX35442.1    CH933807    KRG03693.1    GDHF01003080    JAI49234.1    CM000157    KRJ97550.1    APGK01018891    KB740085    KB632303    ENN81534.1    ERL91800.1    CH940649    KRF81099.1    GAMC01005085    JAC01471.1    GAKP01003641    GAKP01003638    JAC55311.1    CM002910    KMY89718.1    KQ981135    KYN09213.1    AE014134    AAS64679.3    GAKP01003642    JAC55310.1    CH954177    KQS70565.1    KQ982650    KYQ52894.1    KMY89722.1    KRG03695.1    CH379060    KRT04273.1    KRF81101.1    AGB92910.1    KQS70566.1    GAMC01005081    JAC01475.1    CCAG010019099    KQ976558    KYM80700.1    KRJ97542.1    KRG03690.1    JR037015    AEY57527.1    JX997992    AGT38439.1    GAMC01005080    JAC01476.1    KRF81102.1    OUUW01000004    SPP79487.1    CH963857    EDW76008.2    PCG73608.1    GAMC01005084    JAC01472.1    PCG73610.1    JX997991    AGT38438.1    KRF81100.1    KRT04281.1    KA648386    AFP63015.1    PCG73607.1    KQS70567.1    KMY89724.1    AGB92912.1    KQS70569.1    EDV58912.2    KRT04284.1    KRT04276.1    KRF81103.1    EDW13321.2    KQS70568.1    EAL33864.3    GAKP01003633    JAC55319.1    GFDL01002050    JAV32995.1    KMY89734.1   

Proteomes

UP000218220    UP000007151    UP000053268    UP000005203    UP000007266    UP000092461    + More
UP000095300    UP000053097    UP000000311    UP000076502    UP000002358    UP000078542    UP000009192    UP000002282    UP000019118    UP000030742    UP000008792    UP000192221    UP000078492    UP000000803    UP000008711    UP000075809    UP000001819    UP000092444    UP000078540    UP000092443    UP000268350    UP000007798    UP000092445    UP000078200   

PRIDE

Q7KTE8   

Pfam

PF00625   Guanylate_kin        + More
PF12052   VGCC_beta4Aa_N

Interpro

IPR008145   GK/Ca_channel_bsu        + More
IPR001452   SH3_domain       
IPR036028   SH3-like_dom_sf       
IPR027417   P-loop_NTPase       
IPR000584   VDCC_L_bsu       

SUPFAM

SSF52540   SSF52540        + More
SSF50044   SSF50044       

ProteinModelPortal

A0A2A4JPC1   A0A2A4JP69   A0A212EML9   A0A2A4JNF4   A0A194QH78   V9IAN0   + More
A0A087ZMZ3   A0A1Y1KBK3   A0A1Y1K7U2   A0A1Y1K818   A0A1Y1KFL1   A0A1Y1KD44   A0A1Y1K833   T1SG89   A0A1Y1KFK1   A0A1Y1KDR8   A0A1Y1K802   A0A139WHQ7   A0A1B0CUU4   A0A139WHE7   A0A1I8PM22   A0A026W8H4   E2ASH3   Q7M3V8   A0A154P7Q5   A0A0A1XKZ5   K7INI2   A0A195D0B8   A0A034WNH0   A0A034WNG5   A0A0K8TXP2   A0A034WLT2   A0A336N317   A0A336MYH7   A0A0Q9X6P7   A0A0K8WDX8   A0A0R1DKW6   N6TM54   A0A0Q9WJQ1   W8BJL5   A0A034WIC8   A0A1W4W4Z8   A0A1W4W449   A0A0J9R0P5   A0A195D8K3   Q7KTE8   A0A034WMC0   A0A0Q5WHL4   A0A151WYC9   A0A0J9R089   A0A0Q9X637   A0A0R3NSR7   A0A0Q9W8L1   M9PD84   A0A0Q5WAT6   W8CB80   A0A1B0G029   A0A195B8Z5   A0A0R1DSD5   A0A0Q9XD98   V9IA55   T1SG87   A0A1W4VSX4   W8BJL9   A0A1A9XE24   A0A0Q9WJJ8   A0A3B0JAW8   B4MWD8   A0A2A4JPH6   W8C560   A0A2A4JQC5   T1SG86   A0A1B0A0R7   A0A1A9UIL1   A0A1I8PLY9   A0A1I8PLX9   A0A1I8PM12   A0A1I8PLU1   A0A1I8PLY4   A0A1I8PM04   A0A1W4VSU5   A0A0Q9W8N5   A0A0R3NTE8   T1PHY8   A0A2A4JNJ5   A0A0Q5WA93   A0A0J9R1K8   M9PFL4   A0A0Q5WJW1   B3N4K0   A0A0R3NTM1   A0A0R3NTB1   A0A0Q9WIH9   B4KHA4   A0A0Q5WNZ7   Q29M31   A0A034WKZ1   A0A1I8PLV3   A0A1Q3FZK5   A0A0J9R1L8  

PDB

1VYV     E-value=6.30308e-118,     Score=1086

KEGG

101738340    no KO assigned | (RefSeq) voltage-dependent L-type calcium channel subunit beta-2

GO

GO:0005891   GO:0005245   GO:0007528   GO:1901385   GO:0007268   GO:0008331   GO:0019722   GO:0016322   GO:0070588   GO:0016301   GO:0005515   GO:0003676   GO:0008017   GO:0005634   GO:0006289   GO:0004518   GO:0006281   GO:0048384  

Length:

458

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00151

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00081

outside

1  -  458

 

 

Pi

21.361103

Theta

21.880897

Tajima's D

-0.635001

CLR

0.755647

CSRT

0.212239388030598

Interpretation

Possibly Positive selection