Gene

KWMTBOMO02310

Pre Gene Modal

BGIBMGA003766

Annotation

PREDICTED:_protein_abrupt-like_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr4(-):17361498-17379964      View in EpiBrowser

Transcription factor

ZBTB

Location in the cell

Nuclear   Reliability : 4.267

CDS

ATGGCGACCGAGACCGGCGGCGCCGCGGTCGGCGGCGAGCAGCAGTACTCCCTCCGATGGAACGACTTCCACTCTGCGATGGTGTCGTCCTTCCGTCGGCTGAGGGACGAGGAGGACTTCGTGGATGTGACCCTCGCCTGCGCCGGCGCCACCTTCACAGCGCACAAGGTGGTGCTGTCGGCGTGCAGCCCTTACTTCCGAAGGCTGCTGAAGGCCAACCCATGCCAGCACCCCATCGTCATCCTGCGCGATGTTCACGATAAAGACATGGAGAGCTTGTTGAGGTTCATGTATCAAGGCGAAGTCCACATCGGTCAGGAGCAGCTGAAGGAATTCCTGAAAGCGGCCCAGCTGCTCCAGGTCCGAGGGCTGACCGACGTCCCGGCGCCGGCGCCCGTGTCTTCACTTGATCAAAAAGCCTCTCCCTCCGCCTCGTCCTGGACGGAGACTGGCAGCGGGGCCTCCCGCGACGGCCGCGACTCCCACCAGCGCGAGGGGCGGAGGCTCCGGAGACCCGAGGAGGGGGCTGCCAGCACTCCGCCCCCGAAACGTGCCAGGTCTTCCGATTTGTACCAAGCTCAGATGAAGAGCAGGACGGAGCAGCTGCTGGCGGCGCAGGGGGCCAGTCCGGAGACCATGGGCAGCAACGGGCACGAGCTCGCGCTCTTCGGCCACGCGCTCGACGCGCAGCACCCGCACTTGTCCGGGGCCTCCAACAACTTGTCTGGAGACGGAGAGGAGTCCTCATCGGATGCCGGCGCCAGTGACGCGGAGGGAGAACCTCGCGCCAAGCAGGAGCCCCTGGACTACGACGACCCCGCGACCGTGGCCAACACCAACGGAGCCATGCCGCACAGCTTCCCGGGACTACTAAACTTACAGGGATTCCCGGGACTGCCGGGGCCGTCCGGGATGCCGGACACGTACGGTGGCTGTCGAAGAACTCAAGATATCCTGCGCGTTCGGGCCACCGACCCCCGGCCGTGTCCAAAGTGCGGGAAAATTTATCGATCTGCTCACACCCTGAGGACTCACCTCGAGGACAAGCACACAGTGTGCCCCGGCTACCGTTGCGTGCTGTGCGGCACCGTGGCCAAGTCGCGGAACTCCCTGCACTCGCACATGTCGCGGCAACACCGCGGGATCTCCACTAAAGACCTGCCGGTGTTGCAGATGCCGACGCGCTTCGATCCGGAACTGGCGAGCCAGTTGCTGGCGAAGGCCGGGGTGAAGGTGTCGCCGGAGCAGCTGCGGGCGCGCGCGTCCCCCACGGGCCCGCGCCGCTCCGACGTGAAACTGGACGCCAAGTCCGCCTCCGCCGCCTCCGAGACCAGCTCGCTGTGCGGGGACAACGACAACGACGAGCTCAGCCAGTCGCGCTACCAGGACCTGCCCGTGTCGCCGCCGCATATCAATAGCCTGGCGAACACGACCATCACTAAAGTGCCGGCGGTGAGGGCGGCCGCCGCCAAGACGGTGGAGGGCGCGCCGCACGGGCTGGCGCCGCTCAAGCACGACGACTACCCGCCGGGCTACGGGGGCAGCTCCGCCCTGCTCGACACCTATCTGCAGTATATCGGAGAGAATATGTTCGGTATGAACGCAAAATTAGCACAAATGAACGCCATGCACCTGGACAGGAAAACTTACGACGAACCCTCCCCGCAAATGGGCTCCCTCCCGCCCCCGCCCACCAACCTCGCCCACCAGCGCTTCCTCAAGCAGATGCAGCGGCAGTACACCGAGAGCACGGGCAAGCCCGACATCATGCGCGACTCCGACGAGCCCCTGGACCTCGGGAAGGAGAGGCACAGGAATGACAGCATCAGCGAGTCCGACGCCGACAAACACGAGAACCAGGACAAAGACGTCGGCAAGGATTACTACAGCAAAGACTACAACGACGAAGACCGGAGCCGCCTGACCGAGCATGACCAGGAGCACAGCGGCCAGGACGAGGGGGATTACTCAGAGGACGAACACAACAAGAACTCGTCATGA

Protein

MATETGGAAVGGEQQYSLRWNDFHSAMVSSFRRLRDEEDFVDVTLACAGATFTAHKVVLSACSPYFRRLLKANPCQHPIVILRDVHDKDMESLLRFMYQGEVHIGQEQLKEFLKAAQLLQVRGLTDVPAPAPVSSLDQKASPSASSWTETGSGASRDGRDSHQREGRRLRRPEEGAASTPPPKRARSSDLYQAQMKSRTEQLLAAQGASPETMGSNGHELALFGHALDAQHPHLSGASNNLSGDGEESSSDAGASDAEGEPRAKQEPLDYDDPATVANTNGAMPHSFPGLLNLQGFPGLPGPSGMPDTYGGCRRTQDILRVRATDPRPCPKCGKIYRSAHTLRTHLEDKHTVCPGYRCVLCGTVAKSRNSLHSHMSRQHRGISTKDLPVLQMPTRFDPELASQLLAKAGVKVSPEQLRARASPTGPRRSDVKLDAKSASAASETSSLCGDNDNDELSQSRYQDLPVSPPHINSLANTTITKVPAVRAAAAKTVEGAPHGLAPLKHDDYPPGYGGSSALLDTYLQYIGENMFGMNAKLAQMNAMHLDRKTYDEPSPQMGSLPPPPTNLAHQRFLKQMQRQYTESTGKPDIMRDSDEPLDLGKERHRNDSISESDADKHENQDKDVGKDYYSKDYNDEDRSRLTEHDQEHSGQDEGDYSEDEHNKNSS

Uniprot

A0A212EMK4   A0A2A4K8G9   A0A2A4K7E4   A0A1Y1N3R7   A0A139WHP2   A0A0C9PQ19   + More
A0A151WYB3   A0A158NCZ5   E0VF31   A0A195D8M4   A0A1B6CGA8   A0A3L8DHX5   A0A1S3DCJ5   A0A2R7WVY6   A0A3Q0JA34   A0A0P6JKY8   A0A2S2P4E7   J9K0L1   A0A2H8TCW4   U4UCW7  

Pubmed

22118469    28004739    18362917    19820115    21347285    20566863    + More
30249741    23537049   

EMBL

AGBW02013812    OWR42730.1    NWSH01000050    PCG80194.1    PCG80195.1    GEZM01013478    + More
JAV92532.1    KQ971343    KYB27414.1    GBYB01003298    JAG73065.1    KQ982650    KYQ52892.1    ADTU01012096    ADTU01012097    ADTU01012098    ADTU01012099    ADTU01012100    ADTU01012101    ADTU01012102    ADTU01012103    DS235100    EEB11920.1    KQ981135    KYN09217.1    GEDC01024762    JAS12536.1    QOIP01000007    RLU20040.1    KK855482    PTY22765.1    GDIQ01003921    JAN90816.1    GGMR01011635    MBY24254.1    ABLF02021718    GFXV01000130    MBW11935.1    KB632303    ERL91799.1   

Proteomes

UP000007151    UP000218220    UP000007266    UP000075809    UP000005205    UP000009046    + More
UP000078492    UP000279307    UP000079169    UP000007819    UP000030742   

Pfam

PF00651   BTB        + More
PF00096   zf-C2H2

Interpro

IPR000210   BTB/POZ_dom        + More
IPR036236   Znf_C2H2_sf       
IPR011333   SKP1/BTB/POZ_sf       
IPR013087   Znf_C2H2_type       

SUPFAM

SSF54695   SSF54695        + More
SSF57667   SSF57667       

ProteinModelPortal

A0A212EMK4   A0A2A4K8G9   A0A2A4K7E4   A0A1Y1N3R7   A0A139WHP2   A0A0C9PQ19   + More
A0A151WYB3   A0A158NCZ5   E0VF31   A0A195D8M4   A0A1B6CGA8   A0A3L8DHX5   A0A1S3DCJ5   A0A2R7WVY6   A0A3Q0JA34   A0A0P6JKY8   A0A2S2P4E7   J9K0L1   A0A2H8TCW4   U4UCW7  

PDB

4HXI     E-value=3.07582e-07,     Score=133

KEGG

101740863    no KO assigned | (RefSeq) protein abrupt-like

GO

GO:0003676   GO:0005515   GO:0046872   GO:0008061   GO:0008017   GO:0005634   GO:0006289   GO:0004518   GO:0006281   GO:0048384  

Length:

666

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.05527

Exp number, first 60 AAs:

0.04952

Total prob of N-in:

0.00276

outside

1  -  666

 

 

Pi

267.4081

Theta

195.017989

Tajima's D

1.122689

CLR

0.007198

CSRT

0.687465626718664

Interpretation

Uncertain