Gene

KWMTBOMO02308  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003767

Annotation

autophagy_related_protein_Atg3-like_protein_[Bombyx_mori]

Location

Bomo_Chr4(-):17347157-17351214      View in EpiBrowser

Full name

Autophagy-related protein 3      

Location in the cell

Cytoplasmic   Reliability : 1.448 Nuclear   Reliability : 1.423

CDS

ATGCAAAGTGTAATAAACACAGTAAAGGGAACTGCTCTTGGCGTGGCCGGTTACTTGACACCGGTGTTGAAGGAATCGAAATTTCAAGAAACTGGTGTACTGACTCCTGAAGAGTTTGTAGCTGCTGGTGACCACCTGGTACACCACTGCCCTACCTGGCAGTGGGCAAAGGGAGAGGAAGCTAAGATTAGGCCTTACCTTCCTGCAGACAAACAATTCCTTATAACTCGAAATGTGCCATGCTACAGACGATGTAAACAAATTGAATACTGTGAAGATAAAGAGAAAGTGATAGAAGATGAAAACGATGCAGATGGTGGCTGGGTTGATACTCATCACTATGACAATGCAGGCTCCCCTGCACTCGAGGAAAAGGTCTGTGAGATGACCCTCGAAGCAGCTGACACTGGCGACAGTGACGATGGAGCTGCCGACGGTGGTGATGATGATGAAGACGAAGATGATGAGGGCGAGGCTGAGGACATGGAGCAGTTCCAAGAATCTGGTCTTTTAGATGAAGTAGATCCGTCAACAGATCTAGCCCAGCGTACAGAGCTAAAACTCAAAGCCGATAAGAAACAGAAGCAAGGAGAAGGTGATGAGATCGTCCGGACTCGAACTTACGACCTACACATCACTTATGACAAGTATTACCAAACTCCGAGGCTGTGGCTCATCGGATATGATGAGAACCGGTCACTCCTGACTGTGGAACAGATGTACGAAGACGTGTCCCAAGATCACGCTAAAAAGACTGTCACGATGGAATCTCACCCTCATCTCTCTGGACCCAGCATGGCTTCTGTACACCCTTGCAGGCACGCGGACGTCATGAAGAAGATAATAGAGACGGTAACGGAGAGCGGCGGCGAGATGGGCGTCCACTCCTACCTCATAGTATTCCTGAAATTCGTACAAACAGTTATACCCACCATCGAATATGATTTCACACAGAATTTCTCGATTAATTAA

Protein

MQSVINTVKGTALGVAGYLTPVLKESKFQETGVLTPEEFVAAGDHLVHHCPTWQWAKGEEAKIRPYLPADKQFLITRNVPCYRRCKQIEYCEDKEKVIEDENDADGGWVDTHHYDNAGSPALEEKVCEMTLEAADTGDSDDGAADGGDDDEDEDDEGEAEDMEQFQESGLLDEVDPSTDLAQRTELKLKADKKQKQGEGDEIVRTRTYDLHITYDKYYQTPRLWLIGYDENRSLLTVEQMYEDVSQDHAKKTVTMESHPHLSGPSMASVHPCRHADVMKKIIETVTESGGEMGVHSYLIVFLKFVQTVIPTIEYDFTQNFSIN

Similarity

Belongs to the ATG3 family.
Belongs to the tetraspanin (TM4SF) family.

Uniprot

H9J2N0   B7TYK4   J9XR17   A0A2A4K951   A0A2H1V9I0   A0A194QU71   + More
A0A212EMM9   A0A2M4CSF1   A0A182Y619   A0A182X7R3   A0A2M4AQ44   A0A182TR94   Q7QGK7   A0A2M3ZAS5   A0A182VER9   A0A2M4CSK4   A0A182WER1   A0A182QZU0   A0A182JYG5   A0A023EPU3   A0A2M4BTJ9   A0A182RAP8   Q17MR1   A0A182LS77   A0A0K8TSN1   A0A182G9L0   A0A194QGY2   A0A0L7L0E2   U5EY99   B4GRS6   A0A1B6GE40   Q2M0D4   A0A0M4EMQ8   A0A1D2NJG1   B3M873   A0A067QRY9   B0W2I5   A0A182MXQ4   B4KXS6   Q9VVS6   B4PIZ0   D6WMT7   A0A3B0J7P0   B4IFV5   B4QPW0   A0A1L8DW77   D3TMV4   A0A1Q3F8S2   B3NHP1   B4LFX5   A0A182FBI5   B4J1T7   K7IXC6   A0A1B6IFG1   D4AH84   A0A1I8PFE8   A0A0A7A878   A0A1B6KRR4   A0A1W4UBW6   W8C4H3   A0A1Y1LY63   A0A2J7R669   L7M6A5   E2B633   B4N4E9   A0A0K8ULX9   A0A3B3WG89   A0A087YLZ9   A0A0K8SGM0   A0A146LC15   A0A1B6D7P0   A0A0P4VKE6   A0A3P9PWC4   A0A224XNE5   A0A3B3UQ55   A0A0F7LE61   W5M0T0   A0A131XTX4   A0A069DS52   A0A3P8SGH9   A0A3B5AD71   A0A088ATD1   A0A131XEW6   A0A2I4D689   A0A182HN76   A0A147BEM9   A0A2I4D6B1   A0A3B4VKZ9   A0A224YS46   A0A1B6DRF4   A0A1A8SM27   M4A5U4   A0A3P8VA53   A0A3B4Y7K3   B7PSN5   A0A131Z2N0   A0A034WJI0   E2AIM5   A0A1A7YSS7   A0A293MWQ9  

Pubmed

19121390    19470186    26354079    22118469    25244985    12364791    + More
14747013    17210077    24945155    17510324    26369729    26483478    26227816    17994087    15632085    27289101    24845553    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    18362917    19820115    22936249    20353571    20075255    24495485    28004739    25576852    20798317    26823975    27129103    26334808    28049606    29652888    28797301    23542700    24487278    26830274    25348373   

EMBL

BABH01034455    FJ416327    ACJ46061.1    JX313129    AFS31123.1    NWSH01000050    + More
PCG80192.1    ODYU01001369    SOQ37446.1    KQ461191    KPJ07091.1    AGBW02013812    OWR42727.1    GGFL01004082    MBW68260.1    GGFK01009576    MBW42897.1    AAAB01008834    EAA05703.3    GGFM01004883    MBW25634.1    GGFL01004081    MBW68259.1    AXCN02001048    GAPW01002530    JAC11068.1    GGFJ01007192    MBW56333.1    CH477204    EAT47961.1    AXCM01003183    GDAI01000472    JAI17131.1    JXUM01049371    JXUM01049372    KQ561601    KXJ78032.1    KQ458860    KPJ04767.1    JTDY01003814    KOB68968.1    GANO01000424    JAB59447.1    CH479188    EDW40461.1    GECZ01009206    JAS60563.1    CH379069    EAL31000.1    CP012525    ALC44423.1    ALC45035.1    LJIJ01000023    ODN05418.1    CH902618    EDV41012.1    KK853004    KDR12605.1    DS231827    EDS29293.1    CH933809    EDW19783.1    AE014296    AY119557    AAF49233.1    AAM50211.1    CM000159    EDW94581.1    KQ971342    EFA03061.1    OUUW01000002    SPP76183.1    CH480834    EDW46542.1    CM000363    CM002912    EDX10988.1    KMZ00442.1    GFDF01003383    JAV10701.1    EZ422756    ADD19032.1    GFDL01011099    JAV23946.1    CH954178    EDV51836.1    CH940647    EDW70374.1    CH916366    EDV98017.1    AAZX01000032    GECU01032226    GECU01028077    GECU01027654    GECU01022063    GECU01019670    GECU01013822    GECU01000903    JAS75480.1    JAS79629.1    JAS80052.1    JAS85643.1    JAS88036.1    JAS93884.1    JAT06804.1    AB513349    BAI82575.1    KF670693    AHC00664.1    GEBQ01025835    JAT14142.1    GAMC01002308    GAMC01002307    JAC04249.1    GEZM01046348    GEZM01046347    JAV77310.1    NEVH01006980    PNF36327.1    GACK01005474    JAA59560.1    GL445914    EFN88822.1    CH964095    EDW79023.2    GDHF01024753    JAI27561.1    AYCK01022864    GBRD01013896    JAG51930.1    GDHC01020056    GDHC01014519    JAP98572.1    JAQ04110.1    GEDC01026203    GEDC01015591    JAS11095.1    JAS21707.1    GDKW01001050    JAI55545.1    GFTR01005088    JAW11338.1    KP317124    AKH60756.1    AHAT01025099    GEFM01006775    JAP69021.1    GBGD01002119    JAC86770.1    GEFH01004370    JAP64211.1    GEGO01006157    JAR89247.1    GFPF01006275    MAA17421.1    GEDC01020505    GEDC01009047    JAS16793.1    JAS28251.1    HAEI01016489    SBS18958.1    ABJB010403108    ABJB010476986    ABJB010679057    ABJB011130049    DS779597    EEC09607.1    GEDV01003841    JAP84716.1    GAKP01004677    JAC54275.1    GL439840    EFN66714.1    HADW01009460    HADX01010987    SBP33219.1    GFWV01019630    MAA44358.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000007151    UP000076408    UP000076407    + More
UP000075902    UP000007062    UP000075903    UP000075920    UP000075886    UP000075881    UP000075900    UP000008820    UP000075883    UP000069940    UP000249989    UP000053268    UP000037510    UP000008744    UP000001819    UP000092553    UP000094527    UP000007801    UP000027135    UP000002320    UP000075884    UP000009192    UP000000803    UP000002282    UP000007266    UP000268350    UP000001292    UP000000304    UP000008711    UP000008792    UP000069272    UP000001070    UP000002358    UP000095300    UP000192221    UP000235965    UP000008237    UP000007798    UP000261480    UP000028760    UP000242638    UP000261500    UP000018468    UP000265080    UP000261400    UP000005203    UP000192220    UP000261420    UP000002852    UP000265120    UP000261360    UP000001555    UP000000311   

PRIDE

H9J2N0    B7TYK4    Q9VVS6   

Pfam

PF03987   Autophagy_act_C        + More
PF03986   Autophagy_N
PF10381   Autophagy_C
PF00651   BTB
PF09237   GAGA
PF10233   Cg6151-P
PF00335   Tetraspanin

Interpro

IPR007135   Autophagy-rel_prot_3        + More
IPR007134   Autophagy-rel_prot_3_N       
IPR019461   Autophagy-rel_prot_3_C       
IPR011333   SKP1/BTB/POZ_sf       
IPR000210   BTB/POZ_dom       
IPR015318   Znf_GAGA-bd_fac       
IPR013087   Znf_C2H2_type       
IPR008952   Tetraspanin_EC2_sf       
IPR019365   TVP18/Ca-channel_flower       
IPR018499   Tetraspanin/Peripherin       

SUPFAM

SSF54695   SSF54695        + More
SSF48652   SSF48652       

Gene 3D

1.10.1450.10    

ProteinModelPortal

H9J2N0   B7TYK4   J9XR17   A0A2A4K951   A0A2H1V9I0   A0A194QU71   + More
A0A212EMM9   A0A2M4CSF1   A0A182Y619   A0A182X7R3   A0A2M4AQ44   A0A182TR94   Q7QGK7   A0A2M3ZAS5   A0A182VER9   A0A2M4CSK4   A0A182WER1   A0A182QZU0   A0A182JYG5   A0A023EPU3   A0A2M4BTJ9   A0A182RAP8   Q17MR1   A0A182LS77   A0A0K8TSN1   A0A182G9L0   A0A194QGY2   A0A0L7L0E2   U5EY99   B4GRS6   A0A1B6GE40   Q2M0D4   A0A0M4EMQ8   A0A1D2NJG1   B3M873   A0A067QRY9   B0W2I5   A0A182MXQ4   B4KXS6   Q9VVS6   B4PIZ0   D6WMT7   A0A3B0J7P0   B4IFV5   B4QPW0   A0A1L8DW77   D3TMV4   A0A1Q3F8S2   B3NHP1   B4LFX5   A0A182FBI5   B4J1T7   K7IXC6   A0A1B6IFG1   D4AH84   A0A1I8PFE8   A0A0A7A878   A0A1B6KRR4   A0A1W4UBW6   W8C4H3   A0A1Y1LY63   A0A2J7R669   L7M6A5   E2B633   B4N4E9   A0A0K8ULX9   A0A3B3WG89   A0A087YLZ9   A0A0K8SGM0   A0A146LC15   A0A1B6D7P0   A0A0P4VKE6   A0A3P9PWC4   A0A224XNE5   A0A3B3UQ55   A0A0F7LE61   W5M0T0   A0A131XTX4   A0A069DS52   A0A3P8SGH9   A0A3B5AD71   A0A088ATD1   A0A131XEW6   A0A2I4D689   A0A182HN76   A0A147BEM9   A0A2I4D6B1   A0A3B4VKZ9   A0A224YS46   A0A1B6DRF4   A0A1A8SM27   M4A5U4   A0A3P8VA53   A0A3B4Y7K3   B7PSN5   A0A131Z2N0   A0A034WJI0   E2AIM5   A0A1A7YSS7   A0A293MWQ9  

PDB

3VX8     E-value=9.99129e-65,     Score=625

KEGG

100216351    K08343 ubiquitin-like-conjugating enzyme ATG3 | (RefSeq) autophagy related protein Atg3-like protein

PATHWAY

04136    Autophagy - other - Bombyx mori (domestic silkworm)
04140    Autophagy - animal - Bombyx mori (domestic silkworm)

GO

GO:0015031   GO:0006914   GO:0005737   GO:0000045   GO:0005776   GO:0005829   GO:0009267   GO:0061723   GO:0003676   GO:0019776   GO:0019787   GO:0000422   GO:0000153   GO:0016021  

Subcellular location

Cytoplasm  

Length:

323

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.24131

Exp number, first 60 AAs:

0.08039

Total prob of N-in:

0.05290

outside

1  -  323

 

 

Pi

310.05361

Theta

207.946911

Tajima's D

1.575138

CLR

0

CSRT

0.806859657017149

Interpretation

Uncertain