Gene

KWMTBOMO02304

Pre Gene Modal

BGIBMGA003769

Annotation

PREDICTED:_cilia-_and_flagella-associated_protein_43_[Bombyx_mori]

Location

Bomo_Chr4(-):17267758-17271034      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.996

CDS

ATGGAAGATTACAATGACGCTACTCTCATCCGAAGAGAAGATATAGAGAAAATCAACAACGTTATATTGAAAGTAGGAGAACTAAAACTTCGAATGATGAAGAAGCAGATGGATTTCCGCAAAGGGATCCTCAGCAAGGAGTGGGAGCACGCGCAAATGAAGATGAAACTGCGTCACATGGAACAGGAGCTCAGCTCGTACTTACGACTGAAGATCCCAAAAGAACTCCAGCAGTATTTGAAAAACAAGGAACTGGGTTATACCGACGAGCAAGACTACATGCGGATGGAGAAGGAGATGGCTGCCTCCAAGATGTCCATCAACAGGATACTCAATGAGCAGATACATAGAGTGGAGGAGCTCGAGGTGAAGTTAGCGTCAGTTGAAACTGAAGCCAATCGTCTCGAGCAGGTGATAGCCGATCTCAATGTAAAAGTATCCGAGAAAAGAATTCACCAAGATCCTCTCGAGCCTATACGTATAAGAAAAGTTTTTAAGGAAAGGATGGAGACCTTGGTGATGCGCGGACGGCTGATCCGGGAGGTCCAGGCCAATCACACAACCATAGTACTGCTACAGACGGAACTGGAACTGCTACGTTTGAAGACGTATCCAACTTTAGCTAGTTTTCGTACTTTTAATTAA

Protein

MEDYNDATLIRREDIEKINNVILKVGELKLRMMKKQMDFRKGILSKEWEHAQMKMKLRHMEQELSSYLRLKIPKELQQYLKNKELGYTDEQDYMRMEKEMAASKMSINRILNEQIHRVEELEVKLASVETEANRLEQVIADLNVKVSEKRIHQDPLEPIRIRKVFKERMETLVMRGRLIREVQANHTTIVLLQTELELLRLKTYPTLASFRTFN

Uniprot

H9J2N2   A0A2A4K7D3   A0A212EMK7   A0A2H1V9L3   A0A194QGX7   A0A194QP16   + More
A0A1Y1MNW1   A0A182GWF3   Q16LL1   A0A195C3Y7   E9IDP2   A0A182S8L0   F4WEF8   A0A336L9U7   A0A336LYQ2   A0A195E867   A0A182PAH6   A0A151WHY4   A0A182K4I2   A0A182UU88   A0A182MQ64   A0A1Q3G5D0   E2AGZ1   A0A182VXG7   B0W8J8   A0A182XWT8   Q7QBI0   A0A084VA23   A0A182XE69   A0A182HJ54   A0A0J7NV75   A0A139WAR7   A0A195AVC9   A0A182FQB9   A0A182U3F0   A0A182R387   U4U724   N6TFZ2   A0A182NFS1   A0A2J7PCM1   A0A182IT06   A0A158NFA1   A0A195FA10   A0A182LCB4   E0VIH6   E2C509   A0A1B0EX10   A0A182QQN2   W5JS84   K7J465   A0A154NY98   A0A1J1IQA7   A0A067RTW2   A0A026W1G5   A0A3L8DF81   A0A310SPU9   A0A232EWE2   A0A2A3EM09   A0A087ZX04   K1R7K1   A0A2T7PAT1   K1PDE1   F6U441   A0A1W5BMZ9   G1KDP9   R7U7U3   A0A3B4CDI6   V4BMQ1   A0A210QLD8   E9I8L2   A0A369SAM8   A0A151IJA7   B3S8W7   A0A2G8LEE3   A0A3P8XTF8   A0A3M6TRR7   A0A1Y1HZ22   C3Z8X0   A0A2B4SKU7   A0A091QMQ1   A0A060W6H9   A0A3B4UIW2   G3P3Y4   G3P3X9   A0A094KTM7   A0A1S3N470   A0A1S3N3T9   A0A1B6KRG4   A0A195F412  

Pubmed

19121390    22118469    26354079    28004739    26483478    17510324    + More
21282665    21719571    20798317    25244985    12364791    14747013    17210077    24438588    18362917    19820115    23537049    21347285    20966253    20566863    20920257    23761445    20075255    24845553    24508170    30249741    28648823    22992520    12481130    15114417    23254933    28812685    30042472    18719581    29023486    25069045    30382153    24865297    18563158    24755649   

EMBL

BABH01034449    BABH01034450    BABH01034451    NWSH01000050    PCG80185.1    AGBW02013812    + More
OWR42725.1    ODYU01001200    SOQ37092.1    KQ458860    KPJ04762.1    KQ461191    KPJ07094.1    GEZM01027398    JAV86758.1    JXUM01094145    JXUM01094146    KQ564106    KXJ72787.1    CH477902    EAT35198.1    KQ978287    KYM95574.1    GL762454    EFZ21508.1    GL888103    EGI67321.1    UFQS01002716    UFQT01002716    SSX14586.1    SSX33984.1    UFQT01000294    SSX22930.1    KQ979479    KYN21398.1    KQ983106    KYQ47442.1    AXCM01002045    GFDL01000040    JAV35005.1    GL439434    EFN67306.1    DS231859    EDS39048.1    AAAB01008879    EAA08490.5    ATLV01001225    ATLV01001226    KE523952    KFB34817.1    APCN01002125    LBMM01001446    KMQ96295.1    KQ971380    KYB25024.1    KQ976736    KYM75980.1    KB631815    ERL86396.1    APGK01029191    KB740727    ENN79309.1    NEVH01027057    PNF14086.1    ADTU01013846    KQ981720    KYN37268.1    DS235199    EEB13182.1    GL452712    EFN76990.1    AJVK01031161    AJVK01031162    AJVK01031163    AXCN02000243    ADMH02000324    ETN66971.1    AAZX01011384    KQ434772    KZC03850.1    CVRI01000057    CRL02421.1    KK852468    KDR23284.1    KK107519    EZA49426.1    QOIP01000009    RLU19044.1    KQ761502    OAD57469.1    NNAY01001886    OXU22641.1    KZ288219    PBC32312.1    JH818039    EKC29966.1    PZQS01000005    PVD30534.1    JH816898    EKC21897.1    AMQN01008845    KB304086    ELU02415.1    KB202444    ESO90244.1    NEDP02003088    OWF49536.1    GL761587    EFZ23091.1    NOWV01000037    RDD43532.1    KQ977453    KYN02603.1    DS985257    EDV20844.1    MRZV01000108    PIK58587.1    RCHS01003053    RMX44070.1    DF237117    GAQ83920.1    GG666597    EEN51002.1    LSMT01000069    PFX29198.1    KK703031    KFQ28493.1    FR904360    CDQ60839.1    KL343658    KFZ54451.1    GEBQ01025950    JAT14027.1    KQ981855    KYN34907.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000069940    + More
UP000249989    UP000008820    UP000078542    UP000075901    UP000007755    UP000078492    UP000075885    UP000075809    UP000075881    UP000075903    UP000075883    UP000000311    UP000075920    UP000002320    UP000076408    UP000007062    UP000030765    UP000076407    UP000075840    UP000036403    UP000007266    UP000078540    UP000069272    UP000075902    UP000075900    UP000030742    UP000019118    UP000075884    UP000235965    UP000075880    UP000005205    UP000078541    UP000075882    UP000009046    UP000008237    UP000092462    UP000075886    UP000000673    UP000002358    UP000076502    UP000183832    UP000027135    UP000053097    UP000279307    UP000215335    UP000242457    UP000005203    UP000005408    UP000245119    UP000008144    UP000001646    UP000014760    UP000261440    UP000030746    UP000242188    UP000253843    UP000009022    UP000230750    UP000265140    UP000275408    UP000054558    UP000001554    UP000225706    UP000193380    UP000261420    UP000007635    UP000087266   

PRIDE

H9J2N2   

Pfam

PF00400   WD40

Interpro

IPR039692   CFAP43        + More
IPR036322   WD40_repeat_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR011044   Quino_amine_DH_bsu       
IPR001680   WD40_repeat       
IPR017986   WD40_repeat_dom       
IPR011041   Quinoprot_gluc/sorb_DH       
IPR017896   4Fe4S_Fe-S-bd       
IPR019775   WD40_repeat_CS       
IPR020904   Sc_DH/Rdtase_CS       

SUPFAM

SSF50978   SSF50978        + More
SSF50998   SSF50998       
SSF50969   SSF50969       
SSF50952   SSF50952       

Gene 3D

2.130.10.10    

ProteinModelPortal

H9J2N2   A0A2A4K7D3   A0A212EMK7   A0A2H1V9L3   A0A194QGX7   A0A194QP16   + More
A0A1Y1MNW1   A0A182GWF3   Q16LL1   A0A195C3Y7   E9IDP2   A0A182S8L0   F4WEF8   A0A336L9U7   A0A336LYQ2   A0A195E867   A0A182PAH6   A0A151WHY4   A0A182K4I2   A0A182UU88   A0A182MQ64   A0A1Q3G5D0   E2AGZ1   A0A182VXG7   B0W8J8   A0A182XWT8   Q7QBI0   A0A084VA23   A0A182XE69   A0A182HJ54   A0A0J7NV75   A0A139WAR7   A0A195AVC9   A0A182FQB9   A0A182U3F0   A0A182R387   U4U724   N6TFZ2   A0A182NFS1   A0A2J7PCM1   A0A182IT06   A0A158NFA1   A0A195FA10   A0A182LCB4   E0VIH6   E2C509   A0A1B0EX10   A0A182QQN2   W5JS84   K7J465   A0A154NY98   A0A1J1IQA7   A0A067RTW2   A0A026W1G5   A0A3L8DF81   A0A310SPU9   A0A232EWE2   A0A2A3EM09   A0A087ZX04   K1R7K1   A0A2T7PAT1   K1PDE1   F6U441   A0A1W5BMZ9   G1KDP9   R7U7U3   A0A3B4CDI6   V4BMQ1   A0A210QLD8   E9I8L2   A0A369SAM8   A0A151IJA7   B3S8W7   A0A2G8LEE3   A0A3P8XTF8   A0A3M6TRR7   A0A1Y1HZ22   C3Z8X0   A0A2B4SKU7   A0A091QMQ1   A0A060W6H9   A0A3B4UIW2   G3P3Y4   G3P3X9   A0A094KTM7   A0A1S3N470   A0A1S3N3T9   A0A1B6KRG4   A0A195F412  

KEGG

105841586    no KO assigned | (RefSeq) cilia- and flagella-associated protein 43

GO

GO:0016021   GO:0031514   GO:0007288   GO:1905419   GO:0003824   GO:0016491  

PANTHER

PTHR14885:SF1  

Length:

214

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00164

Exp number, first 60 AAs:

0

Total prob of N-in:

0.10589

outside

1  -  214

 

 

Pi

15.849766

Theta

75.50921

Tajima's D

-2.647032

CLR

799.842723

CSRT

0.000149992500374981

Interpretation

Uncertain