Gene

KWMTBOMO02294  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003775

Annotation

PREDICTED:_cell_division_control_protein_48_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr4(-):17104726-17120210      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.614 Nuclear   Reliability : 2.283

CDS

ATGTTAGGAGGTGCTAAACTAAAAGTAGTGTTTACTCACGAAAAAACTTGCTTCGCATATATAAGTCCAAAGTACAGTAGTAATAATGAACAGTCTCAGTGCCTTCAAGTTCTATACAAAGACAAGCACCTGTTTTTATGGGTGGTGTACAGCAGTGGTGTTGCGGAAGGACAAATAGCTTGCAATCCAGTGCATAGTCAACTGATTGGCTTAGATGAGGGAGCTGATGTGTTTGTCTCACCATACGGTGATGTGCGAGTGCTGGATGAATTGTATATAGATACGGACAGCCCTGATGACCAGGAGTTGTTGGAACACAATGCGGAATTACTGCAGCTACGAATACTAGATCAGCTTCGATATGTGGCGGCACATCAAAAATGCGTCGTGTGGATATTTTCATCGATGCCCATCGTTTTCACGCCGAAGCAGACCGGCTTGCTAGTGAACCAGAGCCGCGTAGTCGTTAAAGTTAACGCGTTCAATAGCTACCAAGGCTTCCAAACAAAACCTCCAGCGCCAAACGAACCCAATGGCCCTTTTAAAAATATAGGCTTAATAAACGAAGAGATGCTTCGTCCATATTTGAACTCACCAAAGAGGCTTGTATTGCGTTCGGTACCTATAGACAGCGACGGCAAAAAGAATTTGATACATCCTTACACGGTTTTCATACATGAAGATTTAATAGACGAATGCTTCAAAAATTTAACTGTTATATTATCGACCATGAATTCTATTCCTTCGATTCTGAGCGAAACTGATGAAGACGATAAAGAGAACAATAATAACGCCATAAACGATTTGTGCGTTGAAATTGTGCCCATAGACGGTATCATATACAGGAGCTTGAGCCGCGAAGTGTACAACAGAAACATACCGACAGTGTTGATACCGAAATCGTTGAATGCCATTATCAACATTGAGAATGGAACGAGAATTATATTCAACATAATCGGGGATACGGTAGAGCAACCTGTGCACATTGAATTGGTGACGTATACAGAAGAAAAACAAACAGAAGTCGATGTTATAGACAGATTCAAGAAATGCGTCATAGAGAACACGCATTCAGGCAAAAGATTTTTAATAAATAACGGCATAGTTAAGCAGAATAGTCAGATAAGCGATGGTTATTTGCGGTTCAATTTGAAACCAGACGGTTTGAAATATACCCTCTTGGATTCGGAGAGTTTGAGGCATTTCACTACGAAGGCAACGTGCCTTAACGACACGGATTTAGTCCTGCCGAAACGCAGCGCCTCCCGCATGGAGTATGATTTCAAGAACTATTGCAGGACATTGAAATCAATAGAGACTTTGATCAGTAAAGTTCTCTCGCATTTGTATTTCGAAATACATAGAGAGGCGACGTTTAAAAATGCATCAGAGATTAAAAGCAACGTTCTGATCACGGGGTCCAGTGGTATGGGTAAAACATCGTTGTGTCACATAATCGAGAAGGAGCTGACGGTCTGGTCTCATACGTTGCACTGCAGGGCGCTCAGGGGCCGTAAGGATATACCGGAGATCCTGGGCAAAGCTATCCTCATGTGCCAAGAGCACAGTCCGGCTGTATTGATCTGCGACGACGTGGACTCCATGGTACCGCCCGATATGGAGGGAGTTTCGCCCCAGGATATAGCGTATTATCAGAGATTAGCCGTGGTCATCAAGCACCTCCTGCAGACGTGCGCGGGTGTGTGCGTGCTGATGACGTCACTCTCAATGAAGTCCCTGCACCCGGTCCTCAGGCAGTTCAACGGGAAGCCGCTGTTCACGGCGCACTTCGATATACCTGAAGTTGAACAGGATGAAAGAGTGGAGCTGTTCAAGCATTTGATGAACGAGAAGATCCGTCAGCAGTTCGAGGTAGCGGACGATGACGTCATCACGTTGGCCATGGACACCGCCTCGTGCACAGTGCGGGACATCATCGACCACTTCAATAAGAAGATATTTAAAGCCGTCAAGATGAAAAAAGCGAACCCAGACATTGCGAAGCCTCGTTTAGTCGAGGAAACTGCTAAGGACACGGAGAAAACTACCGCGTTCGACATATGGGGGCCGGTGGGGGGCTTGGAGGACGTCAAGCGGGAACTCACGGAGTGTATCTTCTGGCCTGTCATGTACCCAGCGTTGTTCCCGTCACAATCCTGTGGGATCCTACTGTACGGTCCCCCCGGAACCGGCAAGTCCTACATCGGGTCCTGTCTCGCCAGACTCAACAATATGCACATGATAACAGTGAAAGGACCAGAGCTTCTCTCCAAGTACATAGGGCAGAGCGAGAAGGCTGTTCGGGATGTCTTCGACAAAGCGGACATGAAGCGTCCTTGCATATTGTTCTTCGACGAATTCGACAGTCTCGCGCCCAAACGTGGTCACGACTCGACCGGGGTGACGGACAGAGTGGTGAACCAGCTGCTGGCGAGGATGGACGGCGCCGAGGGCGGGGCCAGGGGTCCCGTTATAGCGGCCACATCGAGGCCGGACCTGGTGGACCCGGCGCTGCTGAGAGCCGGCAGACTTCAGAAGCATATCTACTGCGAACTGCCCGATAGGTGGGGCAGACACGAAGTACTCCAAACATTGACGAAGAATCTAACCGTAGACCAAGAGGTAGACCTCCGAGAGTTGTCTGAGCGCACCGAGGGCTACACTCCCGCCGATCTCAAGTCCTTACTGGTCACGGCGCAACTGACAAGACTAGAGAAACAATTGGCTCACAACGACGACACGACATTGGGGTCCGTGGTGGTGCAGCAAGAAGACATCGATGGAGCTTTGGAGGAAACCAAACCTTCGCTGTCGAGAGAACAATTACTGTTCTACGATATGATATACAAAAGGTTCAGAGGCGAGACTCTGACGTCCGAACAGAAGATAATGGCCGGCCGGTTTGAGAAGCAACGCGCCACTTTGGCTTAA

Protein

MLGGAKLKVVFTHEKTCFAYISPKYSSNNEQSQCLQVLYKDKHLFLWVVYSSGVAEGQIACNPVHSQLIGLDEGADVFVSPYGDVRVLDELYIDTDSPDDQELLEHNAELLQLRILDQLRYVAAHQKCVVWIFSSMPIVFTPKQTGLLVNQSRVVVKVNAFNSYQGFQTKPPAPNEPNGPFKNIGLINEEMLRPYLNSPKRLVLRSVPIDSDGKKNLIHPYTVFIHEDLIDECFKNLTVILSTMNSIPSILSETDEDDKENNNNAINDLCVEIVPIDGIIYRSLSREVYNRNIPTVLIPKSLNAIINIENGTRIIFNIIGDTVEQPVHIELVTYTEEKQTEVDVIDRFKKCVIENTHSGKRFLINNGIVKQNSQISDGYLRFNLKPDGLKYTLLDSESLRHFTTKATCLNDTDLVLPKRSASRMEYDFKNYCRTLKSIETLISKVLSHLYFEIHREATFKNASEIKSNVLITGSSGMGKTSLCHIIEKELTVWSHTLHCRALRGRKDIPEILGKAILMCQEHSPAVLICDDVDSMVPPDMEGVSPQDIAYYQRLAVVIKHLLQTCAGVCVLMTSLSMKSLHPVLRQFNGKPLFTAHFDIPEVEQDERVELFKHLMNEKIRQQFEVADDDVITLAMDTASCTVRDIIDHFNKKIFKAVKMKKANPDIAKPRLVEETAKDTEKTTAFDIWGPVGGLEDVKRELTECIFWPVMYPALFPSQSCGILLYGPPGTGKSYIGSCLARLNNMHMITVKGPELLSKYIGQSEKAVRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVVNQLLARMDGAEGGARGPVIAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEVLQTLTKNLTVDQEVDLRELSERTEGYTPADLKSLLVTAQLTRLEKQLAHNDDTTLGSVVVQQEDIDGALEETKPSLSREQLLFYDMIYKRFRGETLTSEQKIMAGRFEKQRATLA

Uniprot

A0A2A4K7I3   A0A2H1W6M7   A0A194QGT5   A0A194QU80   A0A212EMK0   A0A088A1K8   + More
A0A0L7QNM3   D6WNC9   A0A182K513   B4IYS0   A0A0Q9WVR9   A0A232FGG9   A0A1Q3FC69   A0A1Q3FCM6   K7J597   A0A0Q9XMU1   B0XEN9   A0A0Q9XRI0   A0A034WFN0   A0A034WD20   A0A0K8US19   A0A3B0JL47   B4MKJ9   A0A0V0G6S1   B5DPB6   A0A0A9WLA2   B4GRZ9   A0A1W4U6U0   B4QJK5   Q17MW1   Q9Y090   Q9VUC7   A0A182HCR9   B3ND11   B4HHC1   B3M3I2   B4PI00   A0A151WN25  

Pubmed

26354079    22118469    18362917    19820115    17994087    28648823    + More
20075255    25348373    15632085    25401762    22936249    17510324    10767537    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26483478    17550304   

EMBL

NWSH01000050    PCG80197.1    ODYU01006605    SOQ48596.1    KQ458860    KPJ04753.1    + More
KQ461191    KPJ07106.1    AGBW02013812    OWR42715.1    KQ414851    KOC60225.1    KQ971343    EFA04352.1    CH916366    EDV96607.1    CH940647    KRF84891.1    NNAY01000239    OXU29785.1    GFDL01009870    JAV25175.1    GFDL01009745    JAV25300.1    AAZX01000332    CH933809    KRG06628.1    DS232848    EDS26100.1    KRG06627.1    GAKP01006374    JAC52578.1    GAKP01006373    JAC52579.1    GDHF01023036    JAI29278.1    OUUW01000002    SPP76100.1    CH963847    EDW72705.2    GECL01002314    JAP03810.1    CH379069    EDY73556.2    GBHO01036306    JAG07298.1    CH479188    EDW40534.1    CM000363    CM002912    EDX10414.1    KMY99524.1    CH477203    EAT48041.1    AJ243811    CAB51031.1    AE014296    AY075423    AAF49760.1    AAL68239.1    JXUM01034490    KQ561024    KXJ79987.1    CH954178    EDV51733.1    CH480815    EDW41446.1    CH902618    EDV39243.2    CM000159    EDW94475.1    KQ982919    KYQ49274.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000007151    UP000005203    UP000053825    + More
UP000007266    UP000075881    UP000001070    UP000008792    UP000215335    UP000002358    UP000009192    UP000002320    UP000268350    UP000007798    UP000001819    UP000008744    UP000192221    UP000000304    UP000008820    UP000000803    UP000069940    UP000249989    UP000008711    UP000001292    UP000007801    UP000002282    UP000075809   

PRIDE

Q9Y090   

Pfam

PF17862   AAA_lid_3        + More
PF09262   PEX-1N
PF00004   AAA

Interpro

IPR027417   P-loop_NTPase        + More
IPR015342   PEX-N_psi_beta-barrel       
IPR003959   ATPase_AAA_core       
IPR029067   CDC48_domain_2-like_sf       
IPR025653   Pex1       
IPR003593   AAA+_ATPase       
IPR041569   AAA_lid_3       
IPR003960   ATPase_AAA_CS       
IPR009010   Asp_de-COase-like_dom_sf       

SUPFAM

SSF52540   SSF52540        + More
SSF54585   SSF54585       
SSF50692   SSF50692       

ProteinModelPortal

A0A2A4K7I3   A0A2H1W6M7   A0A194QGT5   A0A194QU80   A0A212EMK0   A0A088A1K8   + More
A0A0L7QNM3   D6WNC9   A0A182K513   B4IYS0   A0A0Q9WVR9   A0A232FGG9   A0A1Q3FC69   A0A1Q3FCM6   K7J597   A0A0Q9XMU1   B0XEN9   A0A0Q9XRI0   A0A034WFN0   A0A034WD20   A0A0K8US19   A0A3B0JL47   B4MKJ9   A0A0V0G6S1   B5DPB6   A0A0A9WLA2   B4GRZ9   A0A1W4U6U0   B4QJK5   Q17MW1   Q9Y090   Q9VUC7   A0A182HCR9   B3ND11   B4HHC1   B3M3I2   B4PI00   A0A151WN25  

PDB

5VCA     E-value=3.36225e-57,     Score=565

KEGG

101739781    K13338 peroxin-1 | (RefSeq) cell division control protein 48

PATHWAY

04146    Peroxisome - Bombyx mori (domestic silkworm)

GO

GO:0042623   GO:0006625   GO:0005778   GO:0005524   GO:0007031   GO:0016558   GO:0016887   GO:0005829   GO:0007422   GO:0021782   GO:0048137   GO:0007417   GO:0005777   GO:0003676   GO:0008017   GO:0005634   GO:0006289   GO:0004518   GO:0006281   GO:0048384  

PANTHER

PTHR23077:SF12  

Length:

976

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0542

Exp number, first 60 AAs:

0.01235

Total prob of N-in:

0.00217

outside

1  -  976

 

 

Pi

188.803965

Theta

152.655306

Tajima's D

0.927318

CLR

0.069922

CSRT

0.634818259087046

Interpretation

Possibly Positive selection