Gene
KWMTBOMO02291
Pre Gene Modal
BGIBMGA003079
Annotation
PREDICTED:_SOX_domain-containing_protein_dichaete-like_[Papilio_polytes]
Transcription factor
Location in the cell
Nuclear Reliability : 3.732
Sequence
CDS
ATGTCGACTTTGAGCCATCACCCGTACGCCTTTTCTATGCATCCCGGGATGTTGCCGGACTATCCAAGCGGGCCGCAGCAGATTCCTGCTACATCTCCGCAGTCCGAGGGCCACATCAAGAGACCCATGAACGCGTTTATGGTGTGGTCGCGCTTGCAGAGGCGACAGATAGCCAAGGATAACCCGAAAATGCACAATTCGGAGATATCTAAGAGGCTCGGAGCGGAGTGGAAGCTGCTTTCTGAGATGCAGAAGCGACCGTTTATTGATGAAGCGAAGAGGCTGAGAGCTCTGCACATGAAGGAGCACCCGGACTACAAGTACAGGCCGCGCAGGAAGCCCAAGCCCCCGACGCAAGGAGGAGCTCCTGGGGCCGGTGCGTTCCCGAGTTTCCCGCTGCCGTATTTTGCCGGTCCTGCTCCCAGCGTGGGCCCACTGGATGCGTTACCGTATCCTGCCGTGCCGCCGTACTTCCCACATCAGCTGGATCACTTGCAGTTCTCCAAGCTAATGGCACCGACGGCTGAGAAGCTGCCGACGGTGTCATCGTCTGCTGCGGCGGTAGTGTCGTCATTCTACTCTTCGTTGTACACTTCACCGGCGGCTCCCCCAAAGCCATTTTCCTCGCCGCTGTTCCACCAGTACGGTATGGCACCCTCGTCGCCTGTATCTCCGGCGACACCCACACAGCACAGTCCCCACGACGATCAGCTCAGGCGGCCGGTGTCTGTCATATATTGA
Protein
MSTLSHHPYAFSMHPGMLPDYPSGPQQIPATSPQSEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLSEMQKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKPPTQGGAPGAGAFPSFPLPYFAGPAPSVGPLDALPYPAVPPYFPHQLDHLQFSKLMAPTAEKLPTVSSSAAAVVSSFYSSLYTSPAAPPKPFSSPLFHQYGMAPSSPVSPATPTQHSPHDDQLRRPVSVIY
Summary
Uniprot
EMBL
Proteomes
PRIDE
Pfam
PF00505 HMG_box
SUPFAM
SSF47095
SSF47095
Gene 3D
ProteinModelPortal
PDB
2LE4
E-value=6.95606e-26,
Score=289
Ontologies
Topology
Length:
246
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.04104
Exp number, first 60 AAs:
0
Total prob of N-in:
0.03592
outside
1 - 246
Population Genetic Test Statistics
Pi
180.17834
Theta
190.478232
Tajima's D
-0.122371
CLR
24.068738
CSRT
0.331983400829958
Interpretation
Uncertain
