SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02286
Pre Gene Modal
BGIBMGA003074
Annotation
Cell_surface_adherence_protein?_collagen-binding_domain?_LPXTG-motif_cell_wall_anchor_[Operophtera_brumata]
Location in the cell
Extracellular   Reliability : 2.063
 

Sequence

CDS
ATGGTCGCCGCGATATATGTTTTTGTTTTTATTATCTTTATTCTAGAGATTGTTAAAGCGGTTCCACCAGAAGCCTGTTTTGCGGAGTTTCGATGGGATGACTGCGGTAAACCTCCAGTGCCGGTCATGTACTATTGGAAGCCTGGATCCAGGTGTGAGGTCGGAATGTGGCGGGGCTGCTTCCCGAACCCGAACATGTTTCAAGATGAACATGAATGCATTACCAGCTGCATCTTCAGTGTACGAGCCATGGCCCACGCCTATCATCAGGAACTGAATCTTAATGAAGCAAATATCATGGGTCTAGAGCAGTTCAAAGAAACTACCGCTGTTACGGAGTCTGGTCTTCAAGAGACGACTGTTGCAGGAACAGATGAAGGGAATGCAACAGTGAGCGAATCTCAAGGTAATGCGACAAGTGCCCGAGAAGCGATGAATGCAACTAATGCGGACTCAGCGACAACTATAGCCACCGTCGTAGAAGCTGCGTCTAACAAAACAAATTGA
Protein
MVAAIYVFVFIIFILEIVKAVPPEACFAEFRWDDCGKPPVPVMYYWKPGSRCEVGMWRGCFPNPNMFQDEHECITSCIFSVRAMAHAYHQELNLNEANIMGLEQFKETTAVTESGLQETTVAGTDEGNATVSESQGNATSAREAMNATNADSATTIATVVEAASNKTN

Summary

Pfam
PF00014   Kunitz_BPTI
Interpro
IPR002223   Kunitz_BPTI        + More
IPR036880   Kunitz_BPTI_sf       
SUPFAM
SSF57362   SSF57362       
Gene 3D
PDB
1DEN     E-value=0.0206713,     Score=84

Ontologies

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.998402
 
 
Length:
168
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
14.45433
Exp number, first 60 AAs:
14.45319
Total prob of N-in:
0.54997
POSSIBLE N-term signal
sequence
outside
1  -  168
 
 

Population Genetic Test Statistics

Pi
142.737401
Theta
139.721267
Tajima's D
0.067833
CLR
3.515719
CSRT
0.382780860956952
Interpretation
Uncertain
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