Silkworm Genome Informatics Database

Gene

KWMTBOMO02276

Pre Gene Modal

BGIBMGA003071

Annotation

PREDICTED:_patronin_isoform_X6_[Bombyx_mori]

Location

Bomo_Chr4(+):15847816-15917064 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.175

CDS

ATGGGCGCGCACATGGTCGTAATCGAAGCACTGATGAAGCTGTACGCTCGAGAGGTTGTGACCGCGGACCGCGTGTGGGCGGCGGCGCAGCGTTTCGGTGCTACGCTGCCGCCCATCAACTCGGCCTCCACCCACGAGGCGGGTATCCTGTGTTGGGTCAACGCGGCCTGCGCTGCATTCAACAAGGCTGAGGAATCAACTCCGCCCGTGCCGACGGTGTCCAGTCTCCAAGATCTGTGCGAAGGCACATCCTTGGCGGCGTTAGTGTCGTTCTACTGTCCCGAAGCGTTGCCTCGCTCTGCGCTGCGGGTGGGCCGCGTCGCTTCGATACAGGATTGTCTGCACAACCTGATGCTGGTGCACGACTTCTGCGCCAACTACCTGCCTCATAACATATTCCACATGATGCCCGAAGACGTCACTTACATGAGAGGGTCAATGAAACAAAATTTAGTAGCGATGCTCGCCGACCTGTTCAACGTGCTAGAAGTTCATCCGGTCAAATCAGTAAAGTGCCCGGGAAGCGTGCCCCGTTCGCCGTCGGCGTGCAGCGGGCGGCCCGCGCCCCGCCGCTCGGCCAGCTCGACGCCCGAGCGGCGCAGCTGCAGCCCGCAACGCGATCAGTTCGTCGTGCACCGCGGCAAGGCGGTCACCACGCTCGCCTCCCTAGCCAGGAGGGACGACGACAATGGATACGAGGCGGGTCCCATAGTGCCGGCGGGGCGGCCCACCCGCGGCGAGGGCCGGGACAGCTTCGCGGGGCGGCGGTCGCGGCGCGGCTCCGTGTCCGACGACAGCCAGCTCACGGTCGAGAACTTCGGCGGCTCGCAGGACACGCTGCACTTCGCCGGACGGAACCCCGAGAAGGAGCTGGCCATCGTCACCAACGTCAGGAAGATATCTGCGCCCGCAGGACCCTTAGACAGCTACAACCCACCCCTGCGATCATCGCGACAAGACATCCGAGGCTCATTCCAACTGTTCGACGACTACAACGGCGCTCCCGACGAACGATTCAAGGTGGAGCGGCCTCCGCCGCAGCTCAGCGACCCCCCCGCGCCGCTCCGCCGCCAGCGCAGCACGGACGCCGTCAACTCGCCGACAACCAACTACTTCACGTACAAGGGCGGCGGGGACGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCTTCTACCTCGGCGATAACAGGGACGCCACCGACGGCGAAGCGATCAAGACTAGCTTCGCCGATCTCAACAAGATCAGGACTAACGGTGACCAGACAGGCGCCGCGTCACAGTTCGGTCCGGTGGAGACGGAGCAGACGGATCGGCGGAAGACCACGACGTTCTCAACGCCGCCGCTGAACACGACGACGTGGCAGCAACAGTTCTTGCAGCAGGAGAACCAACTCAACGGCGAGGAGGGCGCCGGCGAGGGCGGCGCGGGAGGGGGCGGCGCCATGGCCGCACAGCTCAACAACATCCGCCTCAAGCTGGAGGAGAAGCGGCGGCGCATCGAGCTGGACAAGCGGCGCGCGGAGCAGGCGCTCTCCCGCCAGCGCCAGCAGCTCGGCCACCAGGCCTTCCTGCAGGCCGTCACCAGGGACATGGTTGTTGAACCGCCGAGTCAATCTGTCGATAACGTGGTTTTAGAGCAATACCAGCAGTCGATAGCCAAAATGAACTCGAGCCTGCAAGATATACAAAGCGACATAGCGAGATTAGCGAACCAACAGAATCAGTTGCAGCATCAGCAACATCAGCAACACCAGCATCAACAGGCGAAGCAGTTGTTCCAGCAACAACCGCAACCCCAGCTTGTACCGCAGTCGCAGCCGCCACCGTCGCCGGCGCCCTACCAGCAACACTACCAACCGAACATTCCACAGCTGCACAGCCAGTTCAGCTCACAGCACAACGTCGCTCGCTCCCCCCTCTCCGGCTTCGGGTCCACGCCGCACTTGCCGCGCGACCTGCGGGACCAGCGGGAAATGTGGGACCAGCGAGATCAACGGGATCTGCGGGACGTGCGAGATCAGTACTATCCGGCGCAGTACCGCGACATGGACGAGTACAGTCGGCAACAGTTCTACCTGCACGACAGTCCGCCCCCGCCGCAGCGACGCACGTGGGCGCAGCACGCGCAGCACCAGCACGAGCAGGAGCACCGCGGCTGGCAGTTACATCAACAAAGTCAGCCGCAGTACCAGAGAGAGCCGGAGCCCCGCACCTGGCGCTCTCCCTCCCCCTCCGCCTCTCCGCAGCCCCCCGCGGAACGGAGCTGGACTCCGCAAGGGTTTACGCAACCCTTCCATGTCCACTATTCCCAACAGAACGGCAACGACACACAAAATCACCTCAGCTACGTGGTCAGCGAACAGCAACACCAACATCACACCCATCAGCAACACTCCCACCAGCAACAACAGCCGCTTAAACCGCAACAACTACATCAGCGGCAAGCCTCCCCAGCGCCGCCGCCGCCCGACGACATGCAACCGCAGAACATTTCGTTCATTGGGAACGCGGAAGACGACGCACTGCGGCACGGCATCGCCCGCCTCAACATCTCGTCGGGCACCCGCACCTACCGCATCCCCTCCCCCACGCGACCCACGCTCGCCAGGAACTCGTTCCAGCAGGAGGAGCTCCCCGAGAACGAGAAAGGCTTTTACATATCGTTCGATAACGAACAGCCGAAGCGCGCGAAGCCCCCGCTCCGGCCGAAGCGAATGTCCCCGAAGAAGGAGAGGTCGAGCGAAGCGCCAAGCCCCGAGCGCGGTCCCGGGGCGGCGTGGGGCGACCGCGTGCCCGCGCACGAGGAGCCCTGCGTCCCGCGCCGCGCCCCCTCCCCCTCCCCCGAGCGAGCGCGGCCCAGCTCGCCGCAGCCCGCTGCCGCCCTGCTCATCGGGGAAATGAACCCGGATCCCAACTCTGCGGAGGAAATGGAACGCAAGAAGGAGCGCATAATGTTGTTGTCGCTACAACGGCGGCAGCGCGCGGACGAGGCGCGCGCGCGTGCGGAGGCGGCGGCGGCGGCGCGGCGGGCGCGCGAGGACGCCGCGCAGGAACTCAAGCAGGCGCGGAAGGAGGAGCAGGCGCGGCGCCGGGAGGCCATCCTGCAGCAGTACAAGCTCAAGAAGGCCATCGAGGAAGCCGAACGAGAGGGTAAAGTGATAGATAAGTCAGAATTATTGGAGAGTATGAAACACGGCAGCAGTCCAGCGAGCAGTAACCCTCGGCTGCGGTCCCGGGGCGCCACCACGCGCGCCCGGCCCAAGACCATCCACGTAGACACGGGCGCACTGCACGCCGCCGAGGGGATGCTCGCCAAGCAACCGTCCGCCACCAACCTCGCAGCGGGCGGCGGCTCCGTGCGGCGCGACTACTACCGCGGCTCGCAGGACTCGCTCGCCGAGCGCGCCGGCCTCTACCGCGATTCTCCAGTAGACGACCGCGGAGGCATGTCCCCGAGCAGCGCCTCGAGCGGCCCCCTCGGCCGGAGGGGCTCCTGCAAGACTTCCAGAGAGCGCGTGAATGAGGAACCGCAGTCGTCACGTGGAAGGTCTAAATATACGAGTTACCAGAGTAACTTTAAGGCGGGGCGCAAGTCAAGCTCTCTAATGAACTTGTGCGACTCGGGTCTCGGACGGGCCACGCCGCCGCGCCGAGCCGCCTCCCCCGCGCACCGCACCGCCGCCTCCGGGCCCGGCTCGCTGCCCGGCGCGCTGCCCGGCGCCATCGGCAAGCGCAGGCAGCACGACGACAACTCCGACGTCTCCTCCACGCACTCCTCCATCATGGACTACTCCGGTCCCCGGCTGTACAAGCAGCCGACGACCAAGTCGAACCGCGGCATAATGCTGAACGCGGTGGAGTACTGCGTGTTTCCGGGCGCCGTGAACGCGGAGGCCAAGCGGCGCGTGCTGGACGAGGTGGCGCGCTCCGAGTCTAAGCACTTCCTCGTGCTGTTCCGGGACGCGGGCTGCCAGTTCCGCGCGCTCTACTCCTACTGCCCCGAAACGGACCTCATCGCCAAACTCTACGGCACCGGCCCGAAAGTCGTCAACGACAGGATGTTCGACAAGTTCTTCAAGTACAACTCCGGCAGCAAGTGCTTCTCGCAGGTCCACACGAAGCATCTGACGGTCACCATCGACGCGTTCACGATACACAACTCGCTGTGGCAGGGCAAGAAGGTGCAGCTACCCAGCAAGAAGGACATGGCCTTAGTCATATAA

Protein

MGAHMVVIEALMKLYAREVVTADRVWAAAQRFGATLPPINSASTHEAGILCWVNAACAAFNKAEESTPPVPTVSSLQDLCEGTSLAALVSFYCPEALPRSALRVGRVASIQDCLHNLMLVHDFCANYLPHNIFHMMPEDVTYMRGSMKQNLVAMLADLFNVLEVHPVKSVKCPGSVPRSPSACSGRPAPRRSASSTPERRSCSPQRDQFVVHRGKAVTTLASLARRDDDNGYEAGPIVPAGRPTRGEGRDSFAGRRSRRGSVSDDSQLTVENFGGSQDTLHFAGRNPEKELAIVTNVRKISAPAGPLDSYNPPLRSSRQDIRGSFQLFDDYNGAPDERFKVERPPPQLSDPPAPLRRQRSTDAVNSPTTNYFTYKGGGDGGGGGGGGGGFYLGDNRDATDGEAIKTSFADLNKIRTNGDQTGAASQFGPVETEQTDRRKTTTFSTPPLNTTTWQQQFLQQENQLNGEEGAGEGGAGGGGAMAAQLNNIRLKLEEKRRRIELDKRRAEQALSRQRQQLGHQAFLQAVTRDMVVEPPSQSVDNVVLEQYQQSIAKMNSSLQDIQSDIARLANQQNQLQHQQHQQHQHQQAKQLFQQQPQPQLVPQSQPPPSPAPYQQHYQPNIPQLHSQFSSQHNVARSPLSGFGSTPHLPRDLRDQREMWDQRDQRDLRDVRDQYYPAQYRDMDEYSRQQFYLHDSPPPPQRRTWAQHAQHQHEQEHRGWQLHQQSQPQYQREPEPRTWRSPSPSASPQPPAERSWTPQGFTQPFHVHYSQQNGNDTQNHLSYVVSEQQHQHHTHQQHSHQQQQPLKPQQLHQRQASPAPPPPDDMQPQNISFIGNAEDDALRHGIARLNISSGTRTYRIPSPTRPTLARNSFQQEELPENEKGFYISFDNEQPKRAKPPLRPKRMSPKKERSSEAPSPERGPGAAWGDRVPAHEEPCVPRRAPSPSPERARPSSPQPAAALLIGEMNPDPNSAEEMERKKERIMLLSLQRRQRADEARARAEAAAAARRAREDAAQELKQARKEEQARRREAILQQYKLKKAIEEAEREGKVIDKSELLESMKHGSSPASSNPRLRSRGATTRARPKTIHVDTGALHAAEGMLAKQPSATNLAAGGGSVRRDYYRGSQDSLAERAGLYRDSPVDDRGGMSPSSASSGPLGRRGSCKTSRERVNEEPQSSRGRSKYTSYQSNFKAGRKSSSLMNLCDSGLGRATPPRRAASPAHRTAASGPGSLPGALPGAIGKRRQHDDNSDVSSTHSSIMDYSGPRLYKQPTTKSNRGIMLNAVEYCVFPGAVNAEAKRRVLDEVARSESKHFLVLFRDAGCQFRALYSYCPETDLIAKLYGTGPKVVNDRMFDKFFKYNSGSKCFSQVHTKHLTVTIDAFTIHNSLWQGKKVQLPSKKDMALVI

Uniprot

NA

ProteinModelPortal

NA

PDB

1UGJ E-value=4.23109e-32, Score=350

KEGG

101737740 K17493 calmodulin-regulated spectrin-associated protein | (RefSeq) patronin

GO

GO:0005516 GO:0030507 GO:0031175 GO:0005515 GO:0008017 GO:0005634 GO:0006289 GO:0004518 GO:0006281 GO:0048384

Length:

1406

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00683

Exp number, first 60 AAs:

0.000900000000000001

Total prob of N-in:

0.00017

outside

1 - 1406

Pi

228.527495

Theta

179.311977

Tajima's D

1.053929

CLR

0.574429

CSRT

0.672716364181791

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics