Silkworm Genome Informatics Database

Gene

KWMTBOMO02273 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003069

Annotation

PREDICTED:_uncharacterized_protein_LOC106129002_[Amyelois_transitella]

Location

Bomo_Chr4(+):15804436-15832438 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.863

CDS

ATGAAGCTAAAGAAAGCTAAGTCAGATACCGAGGAAGTCATTCCACCTCAAGCCGAAATCATTGAAGCCGATCTCTACAAGAGATCGTATTTCGGTCCAGACATACCAACATTAGAGCTAGAATGCTGGGAAGAAGAACTATCAGAAGTCCAACTACAAGCATACAAAAATGCCGACGATGAGTACAAAAGTATCCAAAACAAACTGGACGATATAGTTAAGAGCACTGGCGGCCAGATTGTTTACAACGGCGATCAATTCACCGCGTATCAGTTGCTTGGAAAACAACCAGCATTGAAAGACTTGGAGCGTCAAAGTGCGGACATAATAAGATCTAGATCACGTTCTATGTCTATCTCAAAGGACAGACCAACAACACGAAGAGGACGTCAGAAGAGGACTCGTGGTGAAGAAAAATACCATTCTCCTTCACCAGAAAAAACCAAATCTCCTGAACCGAAACACAAGAAAAAAAAGAAAGATAAAGAGAAGAACAAAGAAAAGGACAAGGAAAAAGAGAAAGAAAACACAAAGACTAAAGACAAGACACTTGCACCTTCTAATGTACACAGTGTTGTGACAAATGTTCGTCCATCTGAGTCGACAGCTATTGGTGGCCTGCTAACTGGCAACACTACTAAAACAACAGCGATCGTAGACCTCACTAAAGAAGAGAGCAACAAACATGTTGCTGATTCACGTGAAGTTTCGTTCAATAAATTACAAGGTAAAACATTCCCCTCATTGGTGGTAGTGGCCAGGCCATACCTACGTTCGAAGGACCAGTCCCCTCCTTCAGATCGCGCGGCGCTAGACAGCAAGGTCAAAGCGGTCCTCATGCACACCCCTATGAAGTTCACCGAGTGGCTCATACAGCAGGGACTCGTTAAGTTCGAACAGTGGTGCGCTGTCCATCCCGGGAACAAACTGAAACTTGGAATGTACTCCGATGTGATGAAGTTTCCATATTCTGGTGGCTACGTCTGGATATCGGAGTGCTGTCCCACACGTTTCGTGTCAGTGTACTGCAGCTCGATATTCGAAGGCGCGACCTTCCCTCCGAGCGTGCTGCTCAAGCTCATCTACCACTGGGCTTGTCAGACGAATGTACAGAACGTCGTGCAGTGGGTCAAGGTCGATAATCTATATGTGAAAGGTCTCTTCACGTGGTTGAGAGCGGTTTGCACATCAGCGATACACCAGCACATGAGCCTACTTGGTGGACCAGGGAAAAAAGTCGAAGTTGGAGTCATTTCACTGGGCACTACCAGTCATGATGGAACCCAGCGACAGGTCAAGGTCGAAGTTCTAGGAGTATTGGATCCTGTTGAAAAACTGATTCGTCTGCGAGCCGTGGAACCGCTAGCAGAACACGAAAAGAATTACAAGAAGCGCTTTCAGAAGATCCTAGAGCCGTTGACTGGCTGGGTGCATCTGACGTCCACAATCCTCACGGACCTGACGGTGGACAGGGGCACCCTGGTGTCTATGGGCTTCAAGAGCGTCCACCAGTCGTCAGCCCACTCGGACACCAGCACCAAGAACAGCAATGCCAACATCATGGAGTATTTGCGGCGCATCGTGCCTAGAATGTTTCAGAACACTCTGTCGTTGCTCTCGAGACAGATAATACAGCAATTCCTAGATGAACTGGTTTGGAGAGAGAGGTACGGTGTCTCCCCGGGCCAGGCCTTCGACAACATCGTGACCCACATCTCCGAGCAGACCACCATGGAGTGTAAGGACGTCATCACAGTGCGCCTCAACAAGATCGCGGCGAACCCATTCAAGAACTGGAAGTATCCCAGCAACAAGAAAAAAGATAAAGACAAAGATAAAGCCGAAGAAGCTCTTGCTGATCAGGAAATGGGTCGCGGCAAGCGCGGCCGCAAGAAGAAGGAGCCCTCGCCCGCTCCGCCGCCCAAGAGGAAGCGCAGGGAGAAGACCACCTACGTGGACGACGACGAGGAGGAAGAGATACCTCTGGCGCAACGACGTGCTAAGATAAAACAAGAACAGGACAAGACTAAAGAGAAGAAGGAGAAGGAGGAGACTCCCAGCAGGAGGAGCCGCAAGCAACCCAAGACGTATGTGGATGACGACCTGGATGACATACCGCTGAAGAACATCAAGAAGGAGATCCAACCCGAGGAGACCGTGTCGATGGAGAAGTATTACTTCGGGAAGCTCGGCAGCGACGAACCCGGACCCAGGGTGGCTATTGCAGTACAGTGCCCGGTCTGTCACGAGGAGTTCCACAACAACATAACCCTGATGACCCACATCTATAGCCACGTGGTGGAGCCGCCGGCCGGGGCCTCGCCCTCGGCGCCGCAGTGCTGCTACTGCCTGGTGCGCTTCGCCACCGAACAAGAGCTGGACACGCACTTGAAGCACACGCACCCCTCCGATACTAAGTCGCCGGAGCTCTTCACCTACGCCTGCTTGATTTGTGAAACTCGTTTCGCGGCCGTGCTGACCCTGGCGTCGCACATGCAGCGCTCGCACTGCCCGCTGGAGCTGCCGTACGCGTGCGCCCGCTGCCCGCACCGCACGTCCTCGCACCGCGCCGCCGCGCTGCACTACCGCGCCGCGCACGCGCACGACGCCACGCTGCTGTGCCCCTACTGCCTCACGACAATAACGGTGTACGCGGACGGCTACGAACTGACGGCCAACTTGAAGTTGTTCATGGAGCATTTGAAGCAGCATCAAAATAAGCTTGACGTCAAATGTTCCCGGTGTGTGCTCAGATTTTTAAATCTTGGTCACCTAAAAGACCACCAAGTACGTCATCACACCACCGTCCCGGATGCTGTCCCGCTCTGCACTGAAGAACATCTCATCACCAAACCTAAGACCAAGGCTCGTCCGCCGGTGAAGGACTGCGCCAACCACAACATCGTGGAGACGTACGAGCAGATGACGCTGGTGCTGCCCGAGGGCATGCTCTGCCGCGAGTGCGACGCGCCGCTCGACAGCAACAAACACTTCCTAGGGAAGACAACGTGCTCGAAGTGTTCGTTCTCGACGTCGTGCTACCGCGCGCAGCTGCAGCACGCGGCCGTGTGCGCCGGCCCGCACTGCCTGGAGGACGCGCCGCGCGCCGGCCCGCCCGCGCACTGCGTGTGCTCCTACCGCACCGCCGTCAGTACAGATATGCTGACACACTTGCTGGCGTGCGAACACAAGACTGCCTACAGTTCTGAGGAGGAAGCTCGTGCTAACATCGTACGAGCCGATGAACCCAAGCCCCCTGAAGAACCGCAGCCGCAGCCCCAGCCTCAACCGACACAGGAAACTCCTGTTGTAGAAAATGTCCCCACTATAGCCGATTATGCTCCACCATCAGTGCTGAACACTCAGTTGTCCCTCGACGACTTGGCTCCGCCCTCTGTACTACAAACTGACCAGCATGATCAGGAATTGTTGAAGGATGCATATGATCGACCCCTGGCTACCCCACGACACGAAGACCCTCATTACAGTCTTGGAGATTTTGAACCTCTTCCACAGGAACCACCCCCACAACCAGACTTTGAGCAATTATAA

Protein

MKLKKAKSDTEEVIPPQAEIIEADLYKRSYFGPDIPTLELECWEEELSEVQLQAYKNADDEYKSIQNKLDDIVKSTGGQIVYNGDQFTAYQLLGKQPALKDLERQSADIIRSRSRSMSISKDRPTTRRGRQKRTRGEEKYHSPSPEKTKSPEPKHKKKKKDKEKNKEKDKEKEKENTKTKDKTLAPSNVHSVVTNVRPSESTAIGGLLTGNTTKTTAIVDLTKEESNKHVADSREVSFNKLQGKTFPSLVVVARPYLRSKDQSPPSDRAALDSKVKAVLMHTPMKFTEWLIQQGLVKFEQWCAVHPGNKLKLGMYSDVMKFPYSGGYVWISECCPTRFVSVYCSSIFEGATFPPSVLLKLIYHWACQTNVQNVVQWVKVDNLYVKGLFTWLRAVCTSAIHQHMSLLGGPGKKVEVGVISLGTTSHDGTQRQVKVEVLGVLDPVEKLIRLRAVEPLAEHEKNYKKRFQKILEPLTGWVHLTSTILTDLTVDRGTLVSMGFKSVHQSSAHSDTSTKNSNANIMEYLRRIVPRMFQNTLSLLSRQIIQQFLDELVWRERYGVSPGQAFDNIVTHISEQTTMECKDVITVRLNKIAANPFKNWKYPSNKKKDKDKDKAEEALADQEMGRGKRGRKKKEPSPAPPPKRKRREKTTYVDDDEEEEIPLAQRRAKIKQEQDKTKEKKEKEETPSRRSRKQPKTYVDDDLDDIPLKNIKKEIQPEETVSMEKYYFGKLGSDEPGPRVAIAVQCPVCHEEFHNNITLMTHIYSHVVEPPAGASPSAPQCCYCLVRFATEQELDTHLKHTHPSDTKSPELFTYACLICETRFAAVLTLASHMQRSHCPLELPYACARCPHRTSSHRAAALHYRAAHAHDATLLCPYCLTTITVYADGYELTANLKLFMEHLKQHQNKLDVKCSRCVLRFLNLGHLKDHQVRHHTTVPDAVPLCTEEHLITKPKTKARPPVKDCANHNIVETYEQMTLVLPEGMLCRECDAPLDSNKHFLGKTTCSKCSFSTSCYRAQLQHAAVCAGPHCLEDAPRAGPPAHCVCSYRTAVSTDMLTHLLACEHKTAYSSEEEARANIVRADEPKPPEEPQPQPQPQPTQETPVVENVPTIADYAPPSVLNTQLSLDDLAPPSVLQTDQHDQELLKDAYDRPLATPRHEDPHYSLGDFEPLPQEPPPQPDFEQL

Uniprot

H9J0N2 A0A212EJB1 A0A194PMA5

Pubmed

19121390 22118469 26354079

EMBL

BABH01010159 AGBW02014499 OWR41565.1 KQ459598 KPI94566.1

Proteomes

UP000005204 UP000007151 UP000053268

PRIDE

H9J0N2

Interpro

IPR013087 Znf_C2H2_type

ProteinModelPortal

H9J0N2 A0A212EJB1 A0A194PMA5

PDB

2DLQ E-value=0.000826039, Score=105

KEGG

101738225 no KO assigned | (RefSeq) uncharacterized LOC101738225

GO

GO:0003676 GO:0046872 GO:0006470 GO:0005515 GO:0008121 GO:0009331 GO:0005634 GO:0006289 GO:0004518 GO:0006281 GO:0048384

Length:

1183

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01151

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00047

outside

1 - 1183

Pi

265.777829

Theta

179.095803

Tajima's D

1.495525

CLR

0.39217

CSRT

0.784210789460527

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics