Gene

KWMTBOMO02270

Pre Gene Modal

BGIBMGA003093

Annotation

PREDICTED:_protein_spire_[Bombyx_mori]

Location

Bomo_Chr4(-):15570232-15587555      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.499

CDS

ATGGCACTAATGATCGATATTTTTGTTGCAGCGACAAGTGGATCTGGCAGCGGCCCAGGCGGGGGTGAAATGCGGCGCGGGGGTGACGTCACACCGCACACACAACCCCAGCGGAGGCTCATCAAAGTCGACTTTGACAATCTAGAGGATGATGAGGATGAGGAAGACACTGAAACCTGCGCGAGTCCAGAGACGTGTGCTCCCCAACCCTTCCCGAGGCACACTGCACCGACCACACAACAAACCCCTAAACCTTGGAAGAGAACTGAGGAAGTTCCTCGTGCTCCACCGCGCACGCGCATCACCCACGACGAGTACCACCACTTCTGCGACCAGACCCTTGAATCATACGACCTGGCGACGCAGTGTCCGTCGCGACGCGCCTCCATGCGACGCCACACGCTGACGCATCCGGCCTGTCCACCCACCGATGGCGCGCAATCCTTGCCGCACTCCAGGCCAGGTTCTCGCGCATCGTGCGCTGGTGCGGCTTCGATCGCGAGCAGTGACGCTGACGTCCAGCTAGGGGAGCTCTCCTGGTCGCGGTCCTCGCTTCAGGATGAACTGATCAAGTCGGTTAGTGGAAGCCCCAATCATGGATCGCATAAACAATGGCAAGACGCAATCATGTCTGACGATCGGCTGTCGCTGACCTTGGAGGAGATCGTGCACATCAGGTCCGTGCTGACCAAAGCCGAACTCGAGGTCTTACCTGTTGAAGGCAGAGTCAAGGAAGACGTTGAGAAGAGAAGGGTATGCTTCTTGTGTTTGAAGACAAGATTCGGAATTTTTGGACCTTGGGGCCAGAAATGCAAACTGTGCAAAAAGACTGTCTGTCAGAAGTGTTGTTCGAAGATGCGTATACCAACGGAGCATTTCGCTCACGTGCCAGTCGTCCTGCTGAGTCCATCGCTGCTGCCGTCACCGGAGGACGAGGCTCACTCCTCCTTCCCGAGGAGCCTCATGTCGAGACTGGTCTCGCCTGAGTACACGAGCATGGTGGAGAACAGCGTGGGCAGTGCGCCGAGCAGCCCGGCGGGGGCGCGGCGGGCGGCGGCGAGCAGCGCACCCCCCTCGCGCGGCCCCACCCCGCTGTCCCTGCCGCCCGCGCCGCTCATGTCGCGCAGTGTGGACGCGCCCGCAGACACGCTGTACCGCAGGTCCCGCTACAGCCGCAGCCCGACCGGCGCGGCCGAGCGTCTCCGCGGCGTGCAGATGGCGGTGTGCCACGACTGCAAGGCGATGGTGCTGCAGATCATCAAGTCGTCTCGGGCGTCGCGCTCGGCGTCCCGCGACCGAGCCCTGCGGCACCTCACCCTCGACCTGGCGCCAGTCTACACGCCGAACTGCTAA

Protein

MALMIDIFVAATSGSGSGPGGGEMRRGGDVTPHTQPQRRLIKVDFDNLEDDEDEEDTETCASPETCAPQPFPRHTAPTTQQTPKPWKRTEEVPRAPPRTRITHDEYHHFCDQTLESYDLATQCPSRRASMRRHTLTHPACPPTDGAQSLPHSRPGSRASCAGAASIASSDADVQLGELSWSRSSLQDELIKSVSGSPNHGSHKQWQDAIMSDDRLSLTLEEIVHIRSVLTKAELEVLPVEGRVKEDVEKRRVCFLCLKTRFGIFGPWGQKCKLCKKTVCQKCCSKMRIPTEHFAHVPVVLLSPSLLPSPEDEAHSSFPRSLMSRLVSPEYTSMVENSVGSAPSSPAGARRAAASSAPPSRGPTPLSLPPAPLMSRSVDAPADTLYRRSRYSRSPTGAAERLRGVQMAVCHDCKAMVLQIIKSSRASRSASRDRALRHLTLDLAPVYTPNC

Uniprot

H9J0Q6   A0A2A4K7G4   A0A212F5N5   A0A194PMM9   A0A194QNN3   A0A2J7R637   + More
A0A1B6LBR8   A0A1B6LE60   A0A1B6KQR4   A0A2J7R635   A0A067QJX5   A0A224XK81   A0A0N7Z872   A0A1B6F443   A0A1B6L7D9   A0A1B6KTP3   E0VEK2   A0A1B6LTG1   A0A2R7W337   A0A0C9QP70   A0A146L1U8   A0A1B6DBE6   A0A2R7W305   A0A1L8DKB8   A0A1L8DKL4   A0A1J1IKC4   Q176P2   A0A182RZT7   B0WVC3   A0A182NUC0   A0A182GPI0   A0A1Y1KK75   A0A1Y1KHS7   A0A336LXU2   A0A336LVE9   A0A182PMP2   A0A1J1IM93   A0A182W750   A0A182JU66   A0A182M4K5   A0A084WGX5  

Pubmed

19121390    22118469    26354079    24845553    27129103    20566863    + More
26823975    17510324    26483478    28004739    24438588   

EMBL

BABH01010176    NWSH01000048    PCG80215.1    AGBW02010163    OWR49046.1    KQ459598    + More
KPI94572.1    KQ461191    KPJ07133.1    NEVH01006981    PNF36294.1    GEBQ01018850    JAT21127.1    GEBQ01017995    JAT21982.1    GEBQ01026207    JAT13770.1    PNF36295.1    KK853383    KDR08002.1    GFTR01008007    JAW08419.1    GDKW01004155    JAI52440.1    GECZ01024822    JAS44947.1    GEBQ01020397    JAT19580.1    GEBQ01025363    JAT14614.1    DS235093    EEB11808.1    GEBQ01013015    JAT26962.1    KK854277    PTY14124.1    GBYB01002472    JAG72239.1    GDHC01017422    GDHC01004675    JAQ01207.1    JAQ13954.1    GEDC01017970    GEDC01014285    JAS19328.1    JAS23013.1    PTY14123.1    GFDF01007171    JAV06913.1    GFDF01007177    JAV06907.1    CVRI01000054    CRL00683.1    CH477384    EAT42150.1    DS232122    EDS35523.1    JXUM01078518    JXUM01078519    KQ563071    KXJ74532.1    GEZM01083788    JAV61008.1    GEZM01083787    JAV61009.1    UFQT01000214    SSX21801.1    SSX21800.1    CRL00684.1    AXCM01007580    ATLV01023767    KE525346    KFB49469.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000235965    + More
UP000027135    UP000009046    UP000183832    UP000008820    UP000075900    UP000002320    UP000075884    UP000069940    UP000249989    UP000075885    UP000075920    UP000075881    UP000075883    UP000030765   

PRIDE

H9J0Q6   

Pfam

PF16474   KIND

Interpro

IPR029901   Spire        + More
IPR013083   Znf_RING/FYVE/PHD       
IPR011011   Znf_FYVE_PHD       
IPR003124   WH2_dom       
IPR011019   KIND_dom       

SUPFAM

SSF57903   SSF57903       

Gene 3D

3.30.40.10    

ProteinModelPortal

H9J0Q6   A0A2A4K7G4   A0A212F5N5   A0A194PMM9   A0A194QNN3   A0A2J7R637   + More
A0A1B6LBR8   A0A1B6LE60   A0A1B6KQR4   A0A2J7R635   A0A067QJX5   A0A224XK81   A0A0N7Z872   A0A1B6F443   A0A1B6L7D9   A0A1B6KTP3   E0VEK2   A0A1B6LTG1   A0A2R7W337   A0A0C9QP70   A0A146L1U8   A0A1B6DBE6   A0A2R7W305   A0A1L8DKB8   A0A1L8DKL4   A0A1J1IKC4   Q176P2   A0A182RZT7   B0WVC3   A0A182NUC0   A0A182GPI0   A0A1Y1KK75   A0A1Y1KHS7   A0A336LXU2   A0A336LVE9   A0A182PMP2   A0A1J1IM93   A0A182W750   A0A182JU66   A0A182M4K5   A0A084WGX5  

KEGG

101738498    K02098 spire | (RefSeq) protein spire

GO

GO:0045010   GO:0046872   GO:0016192   GO:0003779   GO:0016301  

PANTHER

PTHR21345  

Length:

450

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0027

Exp number, first 60 AAs:

0.00237

Total prob of N-in:

0.00143

outside

1  -  450

 

 

Pi

195.580677

Theta

159.184836

Tajima's D

1.474017

CLR

0.765926

CSRT

0.781160941952902

Interpretation

Uncertain