Gene

KWMTBOMO02269  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003066

Annotation

ubiquinol-cytochrome_c_reductase_[Bombyx_mori]

Location

Bomo_Chr4(+):15560446-15564304      View in EpiBrowser

Full name

Cytochrome b-c1 complex subunit Rieske, mitochondrial      

Location in the cell

Mitochondrial   Reliability : 1.22

CDS

ATGAATTCTGTGGTAAGAGCTGGGCATTTGGCCCCTTATTTTAAGTCTTCTACCCAAGTCGTAGCTAACAGCCTGAAACCTCTGGTGGTCGTACCAACACCCTCCGAGAAAACGGTCGTCCTGCCCTTGCCAAAAACTTCAACTGTGGAAACTTTGCATGGATCCCTGCCGATTCAGGGTTTGAAGGTCAAAGCAGGAACTAGAGTACCTGCCCAAGTACGTTTCGCTCATACTGACATTTCATACCCGGATTTCTCGGCTTACCGTCGCAAAGAAACTCAGGACCCGACTTCGAAGGCCAATGAAACTATTGATGAAAGGCAATCTTTTACGTACCTTATTGCTGGTGCTGGAAGTGTAGCTGGTGCCTATGCTGCCAAATCTGTGGTCACCCACTTTGTGTCATCAATGTCAGCGGCTGCTGATGTTTTGGCTTTAGCCAAGATTGAAATCAAGCTGGCTGAAATTCCAGAAGGAAAGTCTGTCACCTTCAAATGGAGAGGAAAACCATTGTTTATCCGTCACAGGACAGCAGACGAAATCTCGACCGAGAAGGCTGTGCCTGTCGACACGCTCCGTGACCCTCAGCACGACGATCAACGCACCCAAAACCCCAAGTGGTTGGTCGTGATCGGCGTATGCACCCACTTGGGATGCGTGCCCGTAGCCAATGCTGGTGAATTCGGGGGTTACTACTGTCCCTGCCACGGCTCCCACTACGATGCTTCCGGACGAATCCGCAAAGGCCCCGCCCCTCTCAACCTAGAAGTGCCCCCCCACACGTTCATGGACGAAGGCTTGCTAGTTGTCGGTTAA

Protein

MNSVVRAGHLAPYFKSSTQVVANSLKPLVVVPTPSEKTVVLPLPKTSTVETLHGSLPIQGLKVKAGTRVPAQVRFAHTDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIAGAGSVAGAYAAKSVVTHFVSSMSAAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTEKAVPVDTLRDPQHDDQRTQNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPPHTFMDEGLLVVG

Description

Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.

Catalytic Activity

2 [Fe(III)cytochrome c](out) + a quinol = 2 [Fe(II)cytochrome c](out) + a quinone + 2 H(+)(out)

Cofactor

[2Fe-2S] cluster

Subunit

The main subunits of complex b-c1 are: cytochrome b, cytochrome c1 and the Rieske protein.

Miscellaneous

The Rieske protein is a high potential 2Fe-2S protein.

Uniprot

H9J0M9   Q1G0W2   A0A2A4K8I5   A0A0K8TIR8   B3VTV1   H9BBE7   + More
E7E255   A0A212F5M9   S4PDC4   A0A194QQ97   A0A194PNL4   I4DKU3   A0A3B0EGU6   D3YN33   A0A2P8YN35   Q1W2B9   A0A1J1IKA8   A0A2J7R640   A0A1L8E1H8   A0A023F872   A0A171AK32   A0A1L8E137   J3JUT5   U4U4U5   A0A069DQS1   A0A1B0CK59   A0A1Y1M8C3   A0A0T6ATA8   A0A0P4VS66   A0A0A9VZF5   R4G8P6   A0A0V0G3V8   A0A1W4WMI3   A0A067QHG5   U5ERH1   A0A336LNM6   A0A0P5IC96   A0A162SVR7   A0A0P5L3B9   A0A0P5Y6D5   A0A0P5EYS5   A0A1B6MM22   E9FW02   A0A0P4Y3M5   A0A0P5IT71   A0A0P5CVN3   A0A0P5EY59   A0A0P5BMS7   A0A0P6E5P7   A0A0L0BWV5   A0A0P4WVP1   A0A0P4ZNC7   A0A0P7TMB6   A0A0P4ZSY3   A0A0P4Z1V4   T1PDX2   A0A0P4WVT4   A0A1A9YBW7   A0A1B0B0I3   A0A0P5JPW9   A0A0P5KR86   A0A0P4WPJ4   A0A0P5DZ82   D3TR98   A0A0P5Z0W9   A0A0P5LF84   A0A0P5EK99   A0A0P5EDR0   A0A0N8CDX4   A0A1I8MQG2   D6WDE2   A0A1L8EEM3   A0A0P5USJ2   A0A060VM68   R4WE28   A0A0P5NNX5   A0A182J893   A0A0P6IKA8   C1BK32   A0A0P5BW38   A0A1L8EF64   K4FY92   A0A1I8PF34   B5XAY2   A0A0P5D019   A0A0P5APU4   A0A084WQG7   A0A226EW26   A0A0N8AJI9   A0A131XX46   A0A0P5AD28   A7MCR1   A0A0P4WSE7   A0A182JWV9   A0A182PMF9   Q6PC48   A0A0P5TK94   I6QMM6   A0A0P5BEY8   A0A023FKN0  

EC Number

7.1.1.8

Pubmed

19121390    22118469    23622113    26354079    22651552    29403074    + More
25474469    22516182    23537049    26334808    28004739    27129103    25401762    26823975    24845553    21292972    26108605    20353571    25315136    18362917    19820115    24755649    23691247    23056606    20433749    24438588    23594743   

EMBL

BABH01010178    DQ521661    ABF60225.1    NWSH01000048    PCG80214.1    GBRD01000816    + More
JAG65005.1    EU815629    HM210791    ACF21937.1    ADN06277.1    JN992290    JN992291    AFC90195.1    HQ599193    ADT91770.1    AGBW02010163    OWR49045.1    GAIX01003721    JAA88839.1    KQ461191    KPJ07135.1    KQ459598    KPI94573.1    AK401911    BAM18533.1    RBVL01000273    RKO09843.1    GU593056    ADC54384.1    PYGN01000477    PSN45665.1    DQ445508    ABD98746.1    CVRI01000054    CRL00677.1    NEVH01006981    PNF36297.1    GFDF01001729    JAV12355.1    GBBI01001250    JAC17462.1    GEMB01000969    JAS02174.1    GFDF01001728    JAV12356.1    APGK01039256    BT127000    KB740969    AEE61962.1    ENN76693.1    KB631730    ERL85631.1    GBGD01002501    JAC86388.1    AJWK01015797    GEZM01037770    JAV81943.1    LJIG01022901    KRT78157.1    GDKW01000649    JAI55946.1    GBHO01044046    GDHC01010200    GDHC01004532    JAF99557.1    JAQ08429.1    JAQ14097.1    ACPB03011185    GAHY01000607    JAA76903.1    GECL01003391    JAP02733.1    KK853383    KDR08000.1    GANO01003732    JAB56139.1    UFQS01000093    UFQT01000093    SSW99226.1    SSX19606.1    GDIQ01216818    JAK34907.1    LRGB01000024    KZS21668.1    GDIQ01184529    JAK67196.1    GDIP01062268    JAM41447.1    GDIQ01268111    JAJ83613.1    GEBQ01002979    JAT36998.1    GL732525    EFX88639.1    GDIP01236749    JAI86652.1    GDIQ01234064    JAK17661.1    GDIP01181098    JAJ42304.1    GDIQ01268321    JAJ83403.1    GDIP01182795    JAJ40607.1    GDIQ01067326    JAN27411.1    JRES01001220    KNC24517.1    GDIP01254486    JAI68915.1    GDIP01211194    JAJ12208.1    JARO02008919    KPP62168.1    GDIP01212151    JAJ11251.1    GDIP01220602    JAJ02800.1    KA646340    AFP60969.1    GDIP01254422    JAI68979.1    JXJN01006761    GDIQ01221465    JAK30260.1    GDIQ01187775    JAK63950.1    GDIP01254421    JAI68980.1    GDIP01149659    JAJ73743.1    EZ423950    ADD20226.1    GDIP01050571    JAM53144.1    GDIQ01181165    JAK70560.1    GDIP01147054    JAJ76348.1    GDIP01149660    JAJ73742.1    GDIP01141255    JAL62459.1    KQ971321    EFA01233.1    GFDG01001627    JAV17172.1    GDIP01112302    JAL91412.1    FR904258    CDQ55993.1    AK418198    BAN21413.1    GDIQ01142342    JAL09384.1    GDIQ01003539    JAN91198.1    BT074961    ACO09385.1    GDIP01179151    JAJ44251.1    GFDG01001626    JAV17173.1    JX052859    AFK11087.1    BT048201    ACI68002.1    GDIP01179150    JAJ44252.1    GDIP01200699    JAJ22703.1    ATLV01025608    KE525396    KFB52461.1    LNIX01000001    OXA61845.1    GDIQ01269547    JAJ82177.1    GEFM01005116    JAP70680.1    GDIP01200698    JAJ22704.1    BX005081    BC152277    AAI52278.1    GDIP01252888    JAI70513.1    BC059475    AAH59475.1    GDIP01142610    JAL61104.1    JQ398690    AFM38203.1    GDIP01200700    JAJ22702.1    GBBK01003264    JAC21218.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000276569    + More
UP000245037    UP000183832    UP000235965    UP000019118    UP000030742    UP000092461    UP000015103    UP000192223    UP000027135    UP000076858    UP000000305    UP000037069    UP000034805    UP000192224    UP000092443    UP000092460    UP000095301    UP000007266    UP000193380    UP000075880    UP000095300    UP000087266    UP000030765    UP000198287    UP000000437    UP000075881    UP000075885   

PRIDE

H9J0M9    Q1G0W2    Q6PC48   

Pfam

PF00355   Rieske        + More
PF09165   Ubiq-Cytc-red_N
PF02921   UCR_TM

Interpro

IPR015248   Ubiqinol_cyt_c_Rdtase_N        + More
IPR037008   bc1_Rieske_TM_sf       
IPR006317   Ubiquinol_cyt_c_Rdtase_Fe-S-su       
IPR005805   Rieske_Fe-S_prot_C       
IPR017941   Rieske_2Fe-2S       
IPR004192   Rieske_TM       
IPR014349   Rieske_Fe-S_prot       
IPR036922   Rieske_2Fe-2S_sf       
IPR011070   Globular_prot_asu/bsu       

SUPFAM

SSF50022   SSF50022        + More
SSF56568   SSF56568       

Gene 3D

1.20.5.270     2.102.10.10    

ProteinModelPortal

H9J0M9   Q1G0W2   A0A2A4K8I5   A0A0K8TIR8   B3VTV1   H9BBE7   + More
E7E255   A0A212F5M9   S4PDC4   A0A194QQ97   A0A194PNL4   I4DKU3   A0A3B0EGU6   D3YN33   A0A2P8YN35   Q1W2B9   A0A1J1IKA8   A0A2J7R640   A0A1L8E1H8   A0A023F872   A0A171AK32   A0A1L8E137   J3JUT5   U4U4U5   A0A069DQS1   A0A1B0CK59   A0A1Y1M8C3   A0A0T6ATA8   A0A0P4VS66   A0A0A9VZF5   R4G8P6   A0A0V0G3V8   A0A1W4WMI3   A0A067QHG5   U5ERH1   A0A336LNM6   A0A0P5IC96   A0A162SVR7   A0A0P5L3B9   A0A0P5Y6D5   A0A0P5EYS5   A0A1B6MM22   E9FW02   A0A0P4Y3M5   A0A0P5IT71   A0A0P5CVN3   A0A0P5EY59   A0A0P5BMS7   A0A0P6E5P7   A0A0L0BWV5   A0A0P4WVP1   A0A0P4ZNC7   A0A0P7TMB6   A0A0P4ZSY3   A0A0P4Z1V4   T1PDX2   A0A0P4WVT4   A0A1A9YBW7   A0A1B0B0I3   A0A0P5JPW9   A0A0P5KR86   A0A0P4WPJ4   A0A0P5DZ82   D3TR98   A0A0P5Z0W9   A0A0P5LF84   A0A0P5EK99   A0A0P5EDR0   A0A0N8CDX4   A0A1I8MQG2   D6WDE2   A0A1L8EEM3   A0A0P5USJ2   A0A060VM68   R4WE28   A0A0P5NNX5   A0A182J893   A0A0P6IKA8   C1BK32   A0A0P5BW38   A0A1L8EF64   K4FY92   A0A1I8PF34   B5XAY2   A0A0P5D019   A0A0P5APU4   A0A084WQG7   A0A226EW26   A0A0N8AJI9   A0A131XX46   A0A0P5AD28   A7MCR1   A0A0P4WSE7   A0A182JWV9   A0A182PMF9   Q6PC48   A0A0P5TK94   I6QMM6   A0A0P5BEY8   A0A023FKN0  

PDB

5GUP     E-value=6.20074e-81,     Score=764

KEGG

100134921    K00411 ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] | (RefSeq) ubiquinol-cytoch

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0051537   GO:0070469   GO:0005743   GO:0008121   GO:0016020   GO:0005739   GO:0005750   GO:0006122   GO:0016021   GO:0016491   GO:0009331   GO:0005634   GO:0006289   GO:0004518   GO:0006281   GO:0048384   GO:0055114  

PANTHER

PTHR10134  

Subcellular location

Mitochondrion inner membrane  

Length:

271

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.81685

Exp number, first 60 AAs:

0.0014

Total prob of N-in:

0.09851

outside

1  -  271

 

 

Pi

240.893343

Theta

193.590638

Tajima's D

0.826052

CLR

0.133586

CSRT

0.609019549022549

Interpretation

Uncertain