SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02263
Pre Gene Modal
BGIBMGA003063
Annotation
cuticular_protein_RR-2_motif_61_precursor_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.969
 

Sequence

CDS
ATGCTCGCCCTTTTCGCCCTGTTGGTGGCGTCCGCTAAAGCCAGCAGCGGCTATTCGAGTTTCTCTTACGACGTTTCGGATCCGAACACCGGTGACATCAAGGATCAGCATGAAAATCGCGTCGGCGGAAACGTGGTCGGCAAGTACTCACTCCTAGAAGCTGACGGCACCAAGCGCGTCGTCGAATACTCCGCAAATGACGCAACTGGATTCAAGGCTGTAGTGCACAAGGAACCTGCTGGACCTTTGGGTGCATTGGGCGGTGCTCTTAGCCACAGCGGGATCGCTCCTGCTGGTAGTTTGGCTCATGGCTCTCTTTTAGCAGGCGTCTCTCCTTTAGCTGGTGTCCCTTCTTATGCTCATGGCTCCCGTGCTAGTGCCACTTTAGGATACAACGCTCTCGCCAATGATTTGGGTTATGCTGGTTCTCCTAGCCACATTGGTTCTTTGTATGGCAGCTACGGTAACGGACTCGCAAATCCTCTAGGCTACGGGGGTTTTGGTACACCCACTGTCTCTTCCTACTCTCACTCAATCCTCCACAATGGCCCTGATTCGCGACCCTACGGCAATGCTTATGGCGGATACGGTGCCCACGGTGGATACAGGGGCTATGGCAGTCCTCACGCCAACGCTGGGTTCGCTCACGGAGCTGGATGGTCTGCCAATGCTGGACTTACTCACGGAGCTATCGGTAATCCCCTCGCAACTGGTGTTTATGCAGGAGGCGCGGGATACGGCTCTAAACTCGGTTGGTAA
Protein
MLALFALLVASAKASSGYSSFSYDVSDPNTGDIKDQHENRVGGNVVGKYSLLEADGTKRVVEYSANDATGFKAVVHKEPAGPLGALGGALSHSGIAPAGSLAHGSLLAGVSPLAGVPSYAHGSRASATLGYNALANDLGYAGSPSHIGSLYGSYGNGLANPLGYGGFGTPTVSSYSHSILHNGPDSRPYGNAYGGYGAHGGYRGYGSPHANAGFAHGAGWSANAGLTHGAIGNPLATGVYAGGAGYGSKLGW

Summary

Pfam
PF00379   Chitin_bind_4
Interpro
IPR031311   CHIT_BIND_RR_consensus        + More
IPR000618   Insect_cuticle       
ProteinModelPortal

Ontologies

Topology

SignalP
Position:   1 - 14,         Likelihood:  0.948003
 
 
Length:
252
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.19031
Exp number, first 60 AAs:
0.00628
Total prob of N-in:
0.00416
outside
1  -  252
 
 

Population Genetic Test Statistics

Pi
125.673609
Theta
142.214095
Tajima's D
-0.525502
CLR
37.674608
CSRT
0.236138193090345
Interpretation
Uncertain
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