Gene

KWMTBOMO02260  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003061

Annotation

cuticular_protein_RR-2_motif_64_precursor_[Bombyx_mori]

Location

Bomo_Chr4(+):15367042-15368008      View in EpiBrowser

Full name

Larval/pupal rigid cuticle protein 66      

Alternative Name

HCCP66

Location in the cell

Extracellular   Reliability : 1.671 PlasmaMembrane   Reliability : 1.218

CDS

ATGGTTGCCAAGTTCTTCATCATCCTCGCCCTGGTGGCCGTCGCTAGCGCCGGTGATTACTCCAACTTCGCATACAGCGTCGCGGATCCTTACACGGGCGACTTCAAGAACCAGGTGGAGAGCCGACTGGGAGACAACGTGAAGGGTCAGTACTCGCTGCTGGAGTCTGACGGTACTCGCAGGACGGTCGACTACGCCGCCGGAGCCGAAGGCTTCAACGCTGTGGTCAGGAAGGACCCCGCCTTGCTCGCCGCTGCTCCTCTCATCTCCACCCCTTACGCCTACGCCGCACCCTATGGACTCCCTTACTATGCTAAATTCGGTGCTCTCCCATACAACGGCTACTTCCCTTACAACTACAAAGGAATCCTTTACTGA

Protein

MVAKFFIILALVAVASAGDYSNFAYSVADPYTGDFKNQVESRLGDNVKGQYSLLESDGTRRTVDYAAGAEGFNAVVRKDPALLAAAPLISTPYAYAAPYGLPYYAKFGALPYNGYFPYNYKGILY

Keywords

Cuticle   Direct protein sequencing   Signal  

Feature

chain  Larval/pupal rigid cuticle protein 66

Uniprot

C0H6Q6   C0H6X6   G8FVQ3   P45590   A0A2W1CJK6   A0A2A4JM12   + More
A0A191K8D0   A0A2A4JMG9   A0A0N0PAR5   A0A191K8B5   A0A191K8C2   A0A191K8B9   A0A191K8C4   C0H6Q1   A0A212EYF4   A0A212ESC0   A0A212EYJ6   A0A212EYF3   B2DBL1   A0A194PMB5   A0A2A4JLT2   C0H6Q0   A0A212F1F2   A0A0N1IND3   B0X2J1   B0X2J6   B0X2J5   B0X2J4   A0A182H9Q8   Q17C13   B0X2J3   A0A182P157   W5JUH9   D6W8R2   A0A182UE85   A0A182ITR7   A0A182Q1K7   A0A182W8F4  

Pubmed

19121390    19280704    8025561    28756777    26354079    22118469    + More
18712529    26483478    17510324    20920257    23761445    18362917    19820115   

EMBL

BABH01010193    BR000565    FAA00567.1    BABH01042408    BR000635    FAA00637.1    + More
JN082723    AER27820.1    L13971    NHMN01024191    NHMN01024271    PZC87388.1    PZC87397.1    NWSH01001032    PCG73021.1    KR996169    AMQ46016.1    PCG73019.1    KQ461183    KPJ07586.1    KR996167    AMQ46014.1    KR996168    AMQ46015.1    KR996166    AMQ46013.1    KR996170    AMQ46017.1    BABH01010191    BR000560    FAA00562.1    AGBW02012820    AGBW02011525    OWR44396.1    OWR46528.1    OWR44395.1    OWR46527.1    OWR46529.1    AB264695    BAG30770.1    KQ459598    KPI94576.1    PCG73017.1    BR000559    FAA00561.1    AGBW02010891    OWR47570.1    KPJ07588.1    DS232291    EDS39214.1    EDS39215.1    EDS39219.1    EDS39218.1    EDS39217.1    JXUM01121347    KQ566490    KXJ70089.1    CH477314    EAT43806.1    EDS39216.1    ADMH02000334    ETN66923.1    KQ971312    EEZ98277.1    AXCN02001976   

Proteomes

UP000005204    UP000218220    UP000053240    UP000007151    UP000053268    UP000002320    + More
UP000069940    UP000249989    UP000008820    UP000075885    UP000000673    UP000007266    UP000075902    UP000075880    UP000075886    UP000075920   

PRIDE

C0H6Q6    C0H6X6    P45590    C0H6Q1    C0H6Q0   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR031311   CHIT_BIND_RR_consensus        + More
IPR000618   Insect_cuticle       

ProteinModelPortal

C0H6Q6   C0H6X6   G8FVQ3   P45590   A0A2W1CJK6   A0A2A4JM12   + More
A0A191K8D0   A0A2A4JMG9   A0A0N0PAR5   A0A191K8B5   A0A191K8C2   A0A191K8B9   A0A191K8C4   C0H6Q1   A0A212EYF4   A0A212ESC0   A0A212EYJ6   A0A212EYF3   B2DBL1   A0A194PMB5   A0A2A4JLT2   C0H6Q0   A0A212F1F2   A0A0N1IND3   B0X2J1   B0X2J6   B0X2J5   B0X2J4   A0A182H9Q8   Q17C13   B0X2J3   A0A182P157   W5JUH9   D6W8R2   A0A182UE85   A0A182ITR7   A0A182Q1K7   A0A182W8F4  

KEGG

100379407    no KO assigned | (RefSeq) CPR64, BmorCPR64; cuticular protein RR-2 motif 64

GO

GO:0042302   GO:0031012   GO:0008270   GO:0007165   GO:0006072   GO:0009331   GO:0005634   GO:0006289   GO:0004518   GO:0006281   GO:0048384  

SignalP

Position:   1 - 17,         Likelihood:  0.995866

 

 

Length:

125

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

35.99076

Exp number, first 60 AAs:

19.63283

Total prob of N-in:

0.67194

POSSIBLE N-term signal

sequence

inside

1  -  4

TMhelix

5  -  27

outside

28  -  80

TMhelix

81  -  103

inside

104  -  125

 

 

Pi

131.736897

Theta

165.482061

Tajima's D

-0.614827

CLR

228.253319

CSRT

0.215089245537723

Interpretation

Uncertain